RNA–Protein interactions for RNA: ENST00000591547.5

RETREG3-211, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 4

Gene RETREG3, Length 564 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-211ENST00000591547 PTGER2P43116 358 aa14.34□□□□□ -0.11
RETREG3-211ENST00000591547 SRPK2P78362 688 aaKnown RBP14.34□□□□□ -0.11
RETREG3-211ENST00000591547 TOM1L2Q6ZVM7 507 aa14.34□□□□□ -0.11
RETREG3-211ENST00000591547 AKAP12Q02952 1782 aa14.33□□□□□ -0.12
RETREG3-211ENST00000591547 NLRP6P59044 892 aa14.33□□□□□ -0.12
RETREG3-211ENST00000591547 ZNF784Q8NCA9 323 aaPredicted RBP14.32□□□□□ -0.12
RETREG3-211ENST00000591547 SLIT3O75094 1523 aa14.31□□□□□ -0.12
RETREG3-211ENST00000591547 PIK3C2AO00443 1686 aa14.31□□□□□ -0.12
RETREG3-211ENST00000591547 SOX12O15370 315 aa14.31□□□□□ -0.12
RETREG3-211ENST00000591547 CABP1Q9NZU7 370 aa14.31□□□□□ -0.12
RETREG3-211ENST00000591547 AATKQ6ZMQ8 1374 aa14.31□□□□□ -0.12
RETREG3-211ENST00000591547 TXNRD1Q16881 649 aa14.3□□□□□ -0.12
RETREG3-211ENST00000591547 FHDC1Q9C0D6 1143 aaPredicted RBP14.3□□□□□ -0.12
RETREG3-211ENST00000591547 QRICH2Q9H0J4 1663 aa14.3□□□□□ -0.12
RETREG3-211ENST00000591547 KIAA1210Q9ULL0 1709 aa14.29□□□□□ -0.12
RETREG3-211ENST00000591547 STAC3Q96MF2 364 aa14.29□□□□□ -0.12
RETREG3-211ENST00000591547 USP6P35125 1406 aa14.29□□□□□ -0.12
RETREG3-211ENST00000591547 SLC15A2Q16348 729 aa14.28□□□□□ -0.12
RETREG3-211ENST00000591547 WDR17Q8IZU2 1322 aa14.28□□□□□ -0.12
RETREG3-211ENST00000591547 SYT17Q9BSW7 474 aa14.28□□□□□ -0.12
RETREG3-211ENST00000591547 CENPJQ9HC77 1338 aaPredicted RBP14.27□□□□□ -0.12
RETREG3-211ENST00000591547 C11orf95C9JLR9 678 aaPredicted RBP14.27□□□□□ -0.13
RETREG3-211ENST00000591547 STK32BQ9NY57 414 aa14.27□□□□□ -0.13
RETREG3-211ENST00000591547 ACSBG1Q96GR2 724 aa14.26□□□□□ -0.13
RETREG3-211ENST00000591547 CHD4Q14839 1912 aa14.25□□□□□ -0.13
RETREG3-211ENST00000591547 CPSF1Q10570 1443 aaKnown RBP14.25□□□□□ -0.13
RETREG3-211ENST00000591547 SENP3-EIF4A1A0A087X0R7 540 aa14.25□□□□□ -0.13
RETREG3-211ENST00000591547 CSB-PGBD3P0DP91 1061 aa14.25□□□□□ -0.13
RETREG3-211ENST00000591547 SGIP1Q9BQI5 828 aa14.25□□□□□ -0.13
RETREG3-211ENST00000591547 ARHGEF25Q86VW2 580 aa14.24□□□□□ -0.13
RETREG3-211ENST00000591547 EXOC5O00471 708 aa14.23□□□□□ -0.13
RETREG3-211ENST00000591547 CARD10Q9BWT7 1032 aa14.23□□□□□ -0.13
RETREG3-211ENST00000591547 MTFR1LQ9H019 292 aa14.23□□□□□ -0.13
RETREG3-211ENST00000591547 BCL9O00512 1426 aa14.23□□□□□ -0.13
RETREG3-211ENST00000591547 TTC21BQ7Z4L5 1316 aa14.22□□□□□ -0.13
RETREG3-211ENST00000591547 NHSQ6T4R5 1651 aa14.22□□□□□ -0.13
RETREG3-211ENST00000591547 BRD4O60885 1362 aaPredicted RBP14.22□□□□□ -0.13
RETREG3-211ENST00000591547 C1QTNF8P60827 252 aa14.21□□□□□ -0.13
RETREG3-211ENST00000591547 ZNF827Q17R98 1081 aa14.21□□□□□ -0.13
RETREG3-211ENST00000591547 ARXQ96QS3 562 aa14.21□□□□□ -0.13
RETREG3-211ENST00000591547 PAPPAQ13219 1627 aa14.21□□□□□ -0.13
RETREG3-211ENST00000591547 NFAT5O94916 1531 aa14.2□□□□□ -0.14
RETREG3-211ENST00000591547 BTAF1O14981 1849 aa14.2□□□□□ -0.14
RETREG3-211ENST00000591547 TRIM26Q12899 539 aaPredicted RBP14.2□□□□□ -0.14
RETREG3-211ENST00000591547 CDCA7Q9BWT1 371 aaPredicted RBP14.2□□□□□ -0.14
RETREG3-211ENST00000591547 TRPM1Q7Z4N2 1603 aa14.19□□□□□ -0.14
RETREG3-211ENST00000591547 TNS2Q63HR2 1409 aa14.18□□□□□ -0.14
RETREG3-211ENST00000591547 KLHL34Q8N239 644 aa14.18□□□□□ -0.14
RETREG3-211ENST00000591547 LRRC4BQ9NT99 713 aa14.18□□□□□ -0.14
RETREG3-211ENST00000591547 KAT6BQ8WYB5 2073 aa14.18□□□□□ -0.14
RETREG3-211ENST00000591547 KCNH5Q8NCM2 988 aa14.17□□□□□ -0.14
RETREG3-211ENST00000591547 KCNQ4P56696 695 aa14.16□□□□□ -0.14
RETREG3-211ENST00000591547 GPR162Q16538 588 aa14.16□□□□□ -0.14
RETREG3-211ENST00000591547 PELP1Q8IZL8 1130 aaKnown RBP14.16□□□□□ -0.14
RETREG3-211ENST00000591547 CCDC7Q96M83 1385 aa14.16□□□□□ -0.14
RETREG3-211ENST00000591547 GOLGB1Q14789 3259 aaKnown RBP14.16□□□□□ -0.14
RETREG3-211ENST00000591547 EVC2Q86UK5 1308 aa14.15□□□□□ -0.14
RETREG3-211ENST00000591547 TUBGCP6Q96RT7 1819 aa14.15□□□□□ -0.14
RETREG3-211ENST00000591547 LTN1O94822 1766 aa14.15□□□□□ -0.14
RETREG3-211ENST00000591547 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.15□□□□□ -0.14
RETREG3-211ENST00000591547 NLRP2Q9NX02 1062 aa14.15□□□□□ -0.14
RETREG3-211ENST00000591547 ABCC6O95255 1503 aa14.15□□□□□ -0.14
RETREG3-211ENST00000591547 MON2Q7Z3U7 1717 aa14.13□□□□□ -0.15
RETREG3-211ENST00000591547 KTN1Q86UP2 1357 aaKnown RBP14.13□□□□□ -0.15
RETREG3-211ENST00000591547 NME9Q86XW9 330 aa14.13□□□□□ -0.15
RETREG3-211ENST00000591547 NLGN2Q8NFZ4 835 aa14.13□□□□□ -0.15
RETREG3-211ENST00000591547 L3MBTL2Q969R5 705 aa14.13□□□□□ -0.15
RETREG3-211ENST00000591547 ZNF692Q9BU19 519 aaPredicted RBP14.13□□□□□ -0.15
RETREG3-211ENST00000591547 TTC21AQ8NDW8 1320 aa14.13□□□□□ -0.15
RETREG3-211ENST00000591547 IL2RBP14784 551 aa14.12□□□□□ -0.15
RETREG3-211ENST00000591547 AKT1S1Q96B36 256 aa14.12□□□□□ -0.15
RETREG3-211ENST00000591547 SHANK3Q9BYB0 1731 aa14.12□□□□□ -0.15
RETREG3-211ENST00000591547 ERBB3P21860 1342 aa14.12□□□□□ -0.15
RETREG3-211ENST00000591547 MAP3K5Q99683 1374 aa14.11□□□□□ -0.15
RETREG3-211ENST00000591547 ANKRD24Q8TF21 1146 aa14.11□□□□□ -0.15
RETREG3-211ENST00000591547 PNPLA7Q6ZV29 1317 aa14.11□□□□□ -0.15
RETREG3-211ENST00000591547 COL24A1Q17RW2 1714 aa14.1□□□□□ -0.15
RETREG3-211ENST00000591547 GIGYF1O75420 1035 aaPredicted RBP14.1□□□□□ -0.15
RETREG3-211ENST00000591547 DDX54Q8TDD1 881 aaKnown RBP14.1□□□□□ -0.15
RETREG3-211ENST00000591547 QSER1Q2KHR3 1735 aa14.1□□□□□ -0.15
RETREG3-211ENST00000591547 SIN3AQ96ST3 1273 aa14.09□□□□□ -0.15
RETREG3-211ENST00000591547 CEP350Q5VT06 3117 aa14.08□□□□□ -0.15
RETREG3-211ENST00000591547 CD163L1Q9NR16 1453 aa14.08□□□□□ -0.16
RETREG3-211ENST00000591547 LTV1Q96GA3 475 aaPredicted RBP14.08□□□□□ -0.16
RETREG3-211ENST00000591547 USP31Q70CQ4 1352 aa14.08□□□□□ -0.16
RETREG3-211ENST00000591547 USP54Q70EL1 1684 aa14.07□□□□□ -0.16
RETREG3-211ENST00000591547 DOT1LQ8TEK3 1739 aa14.07□□□□□ -0.16
RETREG3-211ENST00000591547 RGPD2P0DJD1 1756 aa14.07□□□□□ -0.16
RETREG3-211ENST00000591547 YBX3P16989 372 aaKnown RBP eCLIP14.07□□□□□ -0.16
RETREG3-211ENST00000591547 IFFO2Q5TF58 517 aa14.07□□□□□ -0.16
RETREG3-211ENST00000591547 POLD1P28340 1107 aa14.06□□□□□ -0.16
RETREG3-211ENST00000591547 SYTL4Q96C24 671 aaPredicted RBP14.06□□□□□ -0.16
RETREG3-211ENST00000591547 TFCP2L1Q9NZI6 479 aa14.06□□□□□ -0.16
RETREG3-211ENST00000591547 ROCK2O75116 1388 aaKnown RBP14.06□□□□□ -0.16
RETREG3-211ENST00000591547 SBNO2Q9Y2G9 1366 aa14.06□□□□□ -0.16
RETREG3-211ENST00000591547 LY75O60449 1722 aa14.05□□□□□ -0.16
RETREG3-211ENST00000591547 FBLN1P23142 703 aa14.05□□□□□ -0.16
RETREG3-211ENST00000591547 PRIM1P49642 420 aaKnown RBP14.05□□□□□ -0.16
RETREG3-211ENST00000591547 TMC1Q8TDI8 760 aa14.05□□□□□ -0.16
RETREG3-211ENST00000591547 NEUROD1Q13562 356 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms