RNA–Protein interactions for RNA: ENST00000591461.1

PKN1-213, Transcript of protein kinase N1, humanhuman

TSL 3

Gene PKN1, Length 867 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKN1-213ENST00000591461 NSD3Q9BZ95 1437 aa20.3■□□□□ 0.84
PKN1-213ENST00000591461 ONECUT3O60422 494 aaPredicted RBP20.3■□□□□ 0.84
PKN1-213ENST00000591461 NFAT5O94916 1531 aa20.3■□□□□ 0.84
PKN1-213ENST00000591461 KIF7Q2M1P5 1343 aa20.29■□□□□ 0.84
PKN1-213ENST00000591461 TNKS1BP1Q9C0C2 1729 aaKnown RBP20.28■□□□□ 0.84
PKN1-213ENST00000591461 NWD2Q9ULI1 1742 aa20.28■□□□□ 0.84
PKN1-213ENST00000591461 COL5A2P05997 1499 aaPredicted RBP20.28■□□□□ 0.84
PKN1-213ENST00000591461 LMO7Q8WWI1 1683 aa20.27■□□□□ 0.84
PKN1-213ENST00000591461 RRS1Q15050 365 aaKnown RBP20.27■□□□□ 0.84
PKN1-213ENST00000591461 MYOM1P52179 1685 aa20.26■□□□□ 0.83
PKN1-213ENST00000591461 CSB-PGBD3P0DP91 1061 aa20.26■□□□□ 0.83
PKN1-213ENST00000591461 TOM1L2Q6ZVM7 507 aa20.26■□□□□ 0.83
PKN1-213ENST00000591461 LTV1Q96GA3 475 aaPredicted RBP20.25■□□□□ 0.83
PKN1-213ENST00000591461 MAP3K19Q56UN5 1328 aa20.25■□□□□ 0.83
PKN1-213ENST00000591461 KRT27Q7Z3Y8 459 aa20.24■□□□□ 0.83
PKN1-213ENST00000591461 TCP11L2Q8N4U5 519 aa20.24■□□□□ 0.83
PKN1-213ENST00000591461 COL18A1P39060 1754 aa20.22■□□□□ 0.83
PKN1-213ENST00000591461 TNNT2P45379 298 aaPredicted RBP20.22■□□□□ 0.83
PKN1-213ENST00000591461 ANKRD24Q8TF21 1146 aa20.22■□□□□ 0.83
PKN1-213ENST00000591461 WDR17Q8IZU2 1322 aa20.22■□□□□ 0.83
PKN1-213ENST00000591461 AMPHP49418 695 aa20.2■□□□□ 0.82
PKN1-213ENST00000591461 IP6K1Q92551 441 aa20.2■□□□□ 0.82
PKN1-213ENST00000591461 WASHC2AQ641Q2 1341 aa20.2■□□□□ 0.82
PKN1-213ENST00000591461 CRB1P82279 1406 aa20.19■□□□□ 0.82
PKN1-213ENST00000591461 HOXC9P31274 260 aa20.19■□□□□ 0.82
PKN1-213ENST00000591461 CNGB1Q14028 1251 aaPredicted RBP20.19■□□□□ 0.82
PKN1-213ENST00000591461 BARGINQ6ZT62 677 aa20.19■□□□□ 0.82
PKN1-213ENST00000591461 NLRP2Q9NX02 1062 aa20.19■□□□□ 0.82
PKN1-213ENST00000591461 EMILIN1Q9Y6C2 1016 aa20.18■□□□□ 0.82
PKN1-213ENST00000591461 CGNL1Q0VF96 1302 aa20.18■□□□□ 0.82
PKN1-213ENST00000591461 CARD10Q9BWT7 1032 aa20.17■□□□□ 0.82
PKN1-213ENST00000591461 ERBB3P21860 1342 aa20.17■□□□□ 0.82
PKN1-213ENST00000591461 CCDC7Q96M83 1385 aa20.17■□□□□ 0.82
PKN1-213ENST00000591461 PPM1GO15355 546 aaPredicted RBP20.16■□□□□ 0.82
PKN1-213ENST00000591461 USP54Q70EL1 1684 aa20.16■□□□□ 0.82
PKN1-213ENST00000591461 EP400Q96L91 3159 aa20.16■□□□□ 0.82
PKN1-213ENST00000591461 HSP90AB2PQ58FF8 381 aa20.15■□□□□ 0.82
PKN1-213ENST00000591461 THRAP3Q9Y2W1 955 aaKnown RBP20.15■□□□□ 0.82
PKN1-213ENST00000591461 BRWD3Q6RI45 1802 aa20.13■□□□□ 0.81
PKN1-213ENST00000591461 PDE3BQ13370 1112 aa20.13■□□□□ 0.81
PKN1-213ENST00000591461 USHBP1Q8N6Y0 703 aa20.13■□□□□ 0.81
PKN1-213ENST00000591461 RGPD5Q99666 1765 aa20.13■□□□□ 0.81
PKN1-213ENST00000591461 THSD7AQ9UPZ6 1657 aa20.13■□□□□ 0.81
PKN1-213ENST00000591461 DEFB132Q7Z7B7 95 aa20.12■□□□□ 0.81
PKN1-213ENST00000591461 POLKQ9UBT6 870 aa20.11■□□□□ 0.81
PKN1-213ENST00000591461 KNSTRNQ9Y448 316 aa20.11■□□□□ 0.81
PKN1-213ENST00000591461 AMER1Q5JTC6 1135 aaPredicted RBP20.1■□□□□ 0.81
PKN1-213ENST00000591461 PER1O15534 1290 aaPredicted RBP20.09■□□□□ 0.81
PKN1-213ENST00000591461 NBPF6Q5VWK0 638 aa20.09■□□□□ 0.81
PKN1-213ENST00000591461 NBPF4Q96M43 638 aa20.09■□□□□ 0.81
PKN1-213ENST00000591461 TRIM37O94972 964 aa20.08■□□□□ 0.81
PKN1-213ENST00000591461 DDB1Q16531 1140 aa20.08■□□□□ 0.81
PKN1-213ENST00000591461 CC2D1BQ5T0F9 858 aaKnown RBP20.08■□□□□ 0.81
PKN1-213ENST00000591461 MORC1Q86VD1 984 aa20.08■□□□□ 0.81
PKN1-213ENST00000591461 MARCH10Q8NA82 808 aaPredicted RBP20.08■□□□□ 0.81
PKN1-213ENST00000591461 BLMP54132 1417 aaPredicted RBP20.08■□□□□ 0.8
PKN1-213ENST00000591461 LTN1O94822 1766 aa20.08■□□□□ 0.8
PKN1-213ENST00000591461 PTF1AQ7RTS3 328 aa20.07■□□□□ 0.8
PKN1-213ENST00000591461 DISP2A7MBM2 1401 aa20.07■□□□□ 0.8
PKN1-213ENST00000591461 KIF20BQ96Q89 1820 aa20.06■□□□□ 0.8
PKN1-213ENST00000591461 PEAK1Q9H792 1746 aa20.05■□□□□ 0.8
PKN1-213ENST00000591461 ABCC6O95255 1503 aa20.05■□□□□ 0.8
PKN1-213ENST00000591461 EXOC5O00471 708 aa20.04■□□□□ 0.8
PKN1-213ENST00000591461 IL2RBP14784 551 aa20.04■□□□□ 0.8
PKN1-213ENST00000591461 RTL1A6NKG5 1358 aa20.04■□□□□ 0.8
PKN1-213ENST00000591461 FAM196AQ6ZSG2 479 aa20.03■□□□□ 0.8
PKN1-213ENST00000591461 INSRP06213 1382 aa20.03■□□□□ 0.8
PKN1-213ENST00000591461 FLT4P35916 1363 aa20.03■□□□□ 0.8
PKN1-213ENST00000591461 EN1Q05925 392 aaPredicted RBP20.02■□□□□ 0.8
PKN1-213ENST00000591461 SF3B2Q13435 895 aaKnown RBP20.01■□□□□ 0.79
PKN1-213ENST00000591461 CDCA7Q9BWT1 371 aaPredicted RBP20.01■□□□□ 0.79
PKN1-213ENST00000591461 EIF4A2Q14240 407 aaKnown RBP20■□□□□ 0.79
PKN1-213ENST00000591461 CCDC125Q86Z20 511 aa20■□□□□ 0.79
PKN1-213ENST00000591461 DDX54Q8TDD1 881 aaKnown RBP20■□□□□ 0.79
PKN1-213ENST00000591461 ACSBG1Q96GR2 724 aa19.99■□□□□ 0.79
PKN1-213ENST00000591461 EYA1Q99502 592 aa19.99■□□□□ 0.79
PKN1-213ENST00000591461 LRRC37A3O60309 1634 aa19.98■□□□□ 0.79
PKN1-213ENST00000591461 NSD2O96028 1365 aa19.98■□□□□ 0.79
PKN1-213ENST00000591461 APBA3O96018 575 aa19.98■□□□□ 0.79
PKN1-213ENST00000591461 KCNQ2O43526 872 aa19.97■□□□□ 0.79
PKN1-213ENST00000591461 EZH2Q15910 746 aaKnown RBP19.97■□□□□ 0.79
PKN1-213ENST00000591461 MEGF6O75095 1541 aa19.97■□□□□ 0.79
PKN1-213ENST00000591461 PARP4Q9UKK3 1724 aaKnown RBP19.96■□□□□ 0.79
PKN1-213ENST00000591461 SMG6Q86US8 1419 aaKnown RBP19.95■□□□□ 0.78
PKN1-213ENST00000591461 MTHFSP49914 203 aa19.95■□□□□ 0.78
PKN1-213ENST00000591461 KIF24Q5T7B8 1368 aa19.95■□□□□ 0.78
PKN1-213ENST00000591461 OVOS2A0A0G2JMS6 1433 aa19.94■□□□□ 0.78
PKN1-213ENST00000591461 TNS2Q63HR2 1409 aa19.94■□□□□ 0.78
PKN1-213ENST00000591461 BAG6P46379 1132 aa19.94■□□□□ 0.78
PKN1-213ENST00000591461 RGPD2P0DJD1 1756 aa19.93■□□□□ 0.78
PKN1-213ENST00000591461 ZCRB1Q8TBF4 217 aaKnown RBP19.93■□□□□ 0.78
PKN1-213ENST00000591461 RAPGEF4Q8WZA2 1011 aa19.93■□□□□ 0.78
PKN1-213ENST00000591461 TATP17735 454 aaPredicted RBP19.92■□□□□ 0.78
PKN1-213ENST00000591461 CAMKK2Q96RR4 588 aa19.92■□□□□ 0.78
PKN1-213ENST00000591461 FAM208AQ9UK61 1670 aaKnown RBP19.91■□□□□ 0.78
PKN1-213ENST00000591461 DDX10Q13206 875 aaKnown RBP19.91■□□□□ 0.78
PKN1-213ENST00000591461 AEBP1Q8IUX7 1158 aa19.9■□□□□ 0.78
PKN1-213ENST00000591461 WNK3Q9BYP7 1800 aa19.9■□□□□ 0.78
PKN1-213ENST00000591461 IL13P35225 146 aa19.89■□□□□ 0.77
PKN1-213ENST00000591461 BCL11BQ9C0K0 894 aaPredicted RBP19.89■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms