RNA–Protein interactions for RNA: ENST00000591348.5

CROCCP3-206, Transcript of ciliary rootlet coiled-coil, rootletin pseudogene 3, humanhuman

TSL 1 (best)

Gene CROCCP3, Length 1,695 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP3-206ENST00000591348 PEAK1Q9H792 1746 aa29.47■■■□□ 2.31
CROCCP3-206ENST00000591348 CDK12Q9NYV4 1490 aaPredicted RBP29.46■■■□□ 2.31
CROCCP3-206ENST00000591348 ABCC6O95255 1503 aa29.45■■■□□ 2.31
CROCCP3-206ENST00000591348 C8orf37Q96NL8 207 aa29.45■■■□□ 2.31
CROCCP3-206ENST00000591348 COL14A1Q05707 1796 aaKnown RBP29.45■■■□□ 2.3
CROCCP3-206ENST00000591348 HSP90AB2PQ58FF8 381 aa29.44■■■□□ 2.3
CROCCP3-206ENST00000591348 CFAP53Q96M91 514 aa29.44■■■□□ 2.3
CROCCP3-206ENST00000591348 AXIN2Q9Y2T1 843 aa29.44■■■□□ 2.3
CROCCP3-206ENST00000591348 BLMP54132 1417 aaPredicted RBP29.43■■■□□ 2.3
CROCCP3-206ENST00000591348 MIER1Q8N108 512 aa29.43■■■□□ 2.3
CROCCP3-206ENST00000591348 NGLY1Q96IV0 654 aa29.43■■■□□ 2.3
CROCCP3-206ENST00000591348 COL18A1P39060 1754 aa29.43■■■□□ 2.3
CROCCP3-206ENST00000591348 INSRP06213 1382 aa29.42■■■□□ 2.3
CROCCP3-206ENST00000591348 LMO7Q8WWI1 1683 aa29.41■■■□□ 2.3
CROCCP3-206ENST00000591348 BTG4Q9NY30 223 aa29.4■■■□□ 2.3
CROCCP3-206ENST00000591348 CAMTA1Q9Y6Y1 1673 aa29.39■■■□□ 2.3
CROCCP3-206ENST00000591348 LTV1Q96GA3 475 aaPredicted RBP29.38■■■□□ 2.29
CROCCP3-206ENST00000591348 PLCH1Q4KWH8 1693 aa29.38■■■□□ 2.29
CROCCP3-206ENST00000591348 RGPD5Q99666 1765 aa29.37■■■□□ 2.29
CROCCP3-206ENST00000591348 ANKRD24Q8TF21 1146 aa29.37■■■□□ 2.29
CROCCP3-206ENST00000591348 SLIT2O94813 1529 aa29.36■■■□□ 2.29
CROCCP3-206ENST00000591348 ERBB3P21860 1342 aa29.36■■■□□ 2.29
CROCCP3-206ENST00000591348 DIAPH1O60610 1272 aaKnown RBP29.35■■■□□ 2.29
CROCCP3-206ENST00000591348 EVA1CP58658 441 aa29.35■■■□□ 2.29
CROCCP3-206ENST00000591348 COL3A1P02461 1466 aaPredicted RBP29.35■■■□□ 2.29
CROCCP3-206ENST00000591348 COL5A2P05997 1499 aaPredicted RBP29.35■■■□□ 2.29
CROCCP3-206ENST00000591348 EIF4A2Q14240 407 aaKnown RBP29.34■■■□□ 2.29
CROCCP3-206ENST00000591348 FNBP4Q8N3X1 1017 aaPredicted RBP29.34■■■□□ 2.29
CROCCP3-206ENST00000591348 MRS2Q9HD23 443 aa29.34■■■□□ 2.29
CROCCP3-206ENST00000591348 STRN4Q9NRL3 753 aa29.34■■■□□ 2.29
CROCCP3-206ENST00000591348 CSB-PGBD3P0DP91 1061 aa29.34■■■□□ 2.29
CROCCP3-206ENST00000591348 NWD2Q9ULI1 1742 aa29.34■■■□□ 2.29
CROCCP3-206ENST00000591348 CCER2I3L3R5 266 aa29.33■■■□□ 2.29
CROCCP3-206ENST00000591348 CCDC184Q52MB2 194 aa29.32■■■□□ 2.28
CROCCP3-206ENST00000591348 AFF2P51816 1311 aa29.31■■■□□ 2.28
CROCCP3-206ENST00000591348 WDR17Q8IZU2 1322 aa29.3■■■□□ 2.28
CROCCP3-206ENST00000591348 IL13P35225 146 aa29.3■■■□□ 2.28
CROCCP3-206ENST00000591348 UNC5CLQ8IV45 518 aa29.3■■■□□ 2.28
CROCCP3-206ENST00000591348 USP21Q9UK80 565 aa29.3■■■□□ 2.28
CROCCP3-206ENST00000591348 NUDCQ9Y266 331 aa29.3■■■□□ 2.28
CROCCP3-206ENST00000591348 NRAPQ86VF7 1730 aa29.28■■■□□ 2.28
CROCCP3-206ENST00000591348 BCL9LQ86UU0 1499 aa29.27■■■□□ 2.28
CROCCP3-206ENST00000591348 LARP1Q6PKG0 1096 aaKnown RBP29.27■■■□□ 2.28
CROCCP3-206ENST00000591348 TOM1L2Q6ZVM7 507 aa29.27■■■□□ 2.28
CROCCP3-206ENST00000591348 U2SURPO15042 1029 aaKnown RBP29.26■■■□□ 2.27
CROCCP3-206ENST00000591348 NLRP2Q9NX02 1062 aa29.26■■■□□ 2.27
CROCCP3-206ENST00000591348 FAM208AQ9UK61 1670 aaKnown RBP29.24■■■□□ 2.27
CROCCP3-206ENST00000591348 EYA1Q99502 592 aa29.24■■■□□ 2.27
CROCCP3-206ENST00000591348 CRB1P82279 1406 aa29.23■■■□□ 2.27
CROCCP3-206ENST00000591348 WDR43Q15061 677 aaKnown RBP eCLIP29.23■■■□□ 2.27
CROCCP3-206ENST00000591348 NBPF6Q5VWK0 638 aa29.23■■■□□ 2.27
CROCCP3-206ENST00000591348 NBPF4Q96M43 638 aa29.23■■■□□ 2.27
CROCCP3-206ENST00000591348 TNKS1BP1Q9C0C2 1729 aaKnown RBP29.22■■■□□ 2.27
CROCCP3-206ENST00000591348 CCDC9Q9Y3X0 531 aaKnown RBP29.21■■■□□ 2.27
CROCCP3-206ENST00000591348 U2AF1L5P0DN76 240 aaPredicted RBP29.21■■■□□ 2.27
CROCCP3-206ENST00000591348 U2AF1Q01081 240 aaKnown RBP eCLIP29.21■■■□□ 2.27
CROCCP3-206ENST00000591348 IGSF1Q8N6C5 1336 aa29.2■■■□□ 2.27
CROCCP3-206ENST00000591348 VPS72Q15906 364 aa29.2■■■□□ 2.26
CROCCP3-206ENST00000591348 CARD10Q9BWT7 1032 aa29.2■■■□□ 2.26
CROCCP3-206ENST00000591348 RGPD2P0DJD1 1756 aa29.2■■■□□ 2.26
CROCCP3-206ENST00000591348 USHBP1Q8N6Y0 703 aa29.19■■■□□ 2.26
CROCCP3-206ENST00000591348 USP35Q9P2H5 1018 aa29.19■■■□□ 2.26
CROCCP3-206ENST00000591348 ZNF772Q68DY9 489 aaPredicted RBP29.18■■■□□ 2.26
CROCCP3-206ENST00000591348 PHF23Q9BUL5 403 aaPredicted RBP29.18■■■□□ 2.26
CROCCP3-206ENST00000591348 RGPD1P0DJD0 1748 aa29.18■■■□□ 2.26
CROCCP3-206ENST00000591348 PNISRQ8TF01 805 aaKnown RBP29.18■■■□□ 2.26
CROCCP3-206ENST00000591348 TRPC5Q9UL62 973 aaPredicted RBP29.18■■■□□ 2.26
CROCCP3-206ENST00000591348 SULT6B1Q6IMI4 303 aa29.17■■■□□ 2.26
CROCCP3-206ENST00000591348 SPATA31A5Q5VU36 1347 aa29.16■■■□□ 2.26
CROCCP3-206ENST00000591348 SPATA31A7Q8IWB4 1347 aa29.16■■■□□ 2.26
CROCCP3-206ENST00000591348 HMOX1P09601 288 aa29.15■■■□□ 2.26
CROCCP3-206ENST00000591348 SPATA31A1Q5TZJ5 1347 aa29.15■■■□□ 2.26
CROCCP3-206ENST00000591348 ATRNO75882 1429 aa29.14■■■□□ 2.26
CROCCP3-206ENST00000591348 AEBP1Q8IUX7 1158 aa29.14■■■□□ 2.26
CROCCP3-206ENST00000591348 QTRT2Q9H974 415 aaKnown RBP29.14■■■□□ 2.26
CROCCP3-206ENST00000591348 NCAPD2Q15021 1401 aa29.14■■■□□ 2.25
CROCCP3-206ENST00000591348 TCP11L2Q8N4U5 519 aa29.13■■■□□ 2.25
CROCCP3-206ENST00000591348 ADAMTS8Q9UP79 889 aa29.13■■■□□ 2.25
CROCCP3-206ENST00000591348 FAM9BQ8IZU0 186 aa29.12■■■□□ 2.25
CROCCP3-206ENST00000591348 KDRP35968 1356 aa29.12■■■□□ 2.25
CROCCP3-206ENST00000591348 THRAP3Q9Y2W1 955 aaKnown RBP29.11■■■□□ 2.25
CROCCP3-206ENST00000591348 FCHSD2O94868 740 aa29.1■■■□□ 2.25
CROCCP3-206ENST00000591348 GJD4Q96KN9 370 aaPredicted RBP29.1■■■□□ 2.25
CROCCP3-206ENST00000591348 RAPGEF4Q8WZA2 1011 aa29.09■■■□□ 2.25
CROCCP3-206ENST00000591348 RSPH6AQ9H0K4 717 aa29.09■■■□□ 2.25
CROCCP3-206ENST00000591348 PNNQ9H307 717 aaKnown RBP29.07■■■□□ 2.24
CROCCP3-206ENST00000591348 IL2RBP14784 551 aa29.06■■■□□ 2.24
CROCCP3-206ENST00000591348 PRKAR2BP31323 418 aa29.06■■■□□ 2.24
CROCCP3-206ENST00000591348 RGS17Q9UGC6 210 aaPredicted RBP29.06■■■□□ 2.24
CROCCP3-206ENST00000591348 TATP17735 454 aaPredicted RBP29.05■■■□□ 2.24
CROCCP3-206ENST00000591348 BARGINQ6ZT62 677 aa29.05■■■□□ 2.24
CROCCP3-206ENST00000591348 GLI3P10071 1580 aa29.04■■■□□ 2.24
CROCCP3-206ENST00000591348 MEGF6O75095 1541 aa29.03■■■□□ 2.24
CROCCP3-206ENST00000591348 NEFMP07197 916 aa29.03■■■□□ 2.24
CROCCP3-206ENST00000591348 FAM98CQ17RN3 349 aaKnown RBP29.03■■■□□ 2.24
CROCCP3-206ENST00000591348 CDCA7Q9BWT1 371 aaPredicted RBP29.02■■■□□ 2.24
CROCCP3-206ENST00000591348 RBM6P78332 1123 aaKnown RBP29.02■■■□□ 2.24
CROCCP3-206ENST00000591348 CCDC146Q8IYE0 955 aa29.02■■■□□ 2.24
CROCCP3-206ENST00000591348 DISP2A7MBM2 1401 aa29.01■■■□□ 2.23
CROCCP3-206ENST00000591348 MAPK8IP3Q9UPT6 1336 aa29■■■□□ 2.23
Retrieved 100 of 20,778 RNA–protein pairs in 88.3 ms