RNA–Protein interactions for RNA: ENST00000590635.5

CTDP1-206, Transcript of CTD phosphatase subunit 1, humanhuman

TSL 5

Gene CTDP1, Length 489 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1-206ENST00000590635 WDR17Q8IZU2 1322 aa16.85■□□□□ 0.29
CTDP1-206ENST00000590635 CRB1P82279 1406 aa16.85■□□□□ 0.29
CTDP1-206ENST00000590635 LMO7Q8WWI1 1683 aa16.85■□□□□ 0.29
CTDP1-206ENST00000590635 SF3B2Q13435 895 aaKnown RBP16.84■□□□□ 0.29
CTDP1-206ENST00000590635 CDCA7Q9BWT1 371 aaPredicted RBP16.84■□□□□ 0.29
CTDP1-206ENST00000590635 OVOS2A0A0J9YW53 1432 aa16.83■□□□□ 0.28
CTDP1-206ENST00000590635 C11orf95C9JLR9 678 aaPredicted RBP16.83■□□□□ 0.28
CTDP1-206ENST00000590635 FYB1O15117 783 aa16.83■□□□□ 0.28
CTDP1-206ENST00000590635 ABCC6O95255 1503 aa16.83■□□□□ 0.28
CTDP1-206ENST00000590635 CSB-PGBD3P0DP91 1061 aa16.83■□□□□ 0.28
CTDP1-206ENST00000590635 PDE3BQ13370 1112 aa16.83■□□□□ 0.28
CTDP1-206ENST00000590635 OVOS2Q6IE36 1432 aa16.83■□□□□ 0.28
CTDP1-206ENST00000590635 NFAT5O94916 1531 aa16.82■□□□□ 0.28
CTDP1-206ENST00000590635 POLR3GLQ9BT43 218 aa16.82■□□□□ 0.28
CTDP1-206ENST00000590635 CARD10Q9BWT7 1032 aa16.82■□□□□ 0.28
CTDP1-206ENST00000590635 USP54Q70EL1 1684 aa16.81■□□□□ 0.28
CTDP1-206ENST00000590635 BLMP54132 1417 aaPredicted RBP16.81■□□□□ 0.28
CTDP1-206ENST00000590635 FAM196AQ6ZSG2 479 aa16.8■□□□□ 0.28
CTDP1-206ENST00000590635 IP6K1Q92551 441 aa16.8■□□□□ 0.28
CTDP1-206ENST00000590635 CARD14Q9BXL6 1004 aa16.79■□□□□ 0.28
CTDP1-206ENST00000590635 GGNBP2Q9H3C7 697 aa16.79■□□□□ 0.28
CTDP1-206ENST00000590635 CCDC7Q96M83 1385 aa16.78■□□□□ 0.28
CTDP1-206ENST00000590635 CGNL1Q0VF96 1302 aa16.78■□□□□ 0.28
CTDP1-206ENST00000590635 AMPHP49418 695 aa16.78■□□□□ 0.28
CTDP1-206ENST00000590635 COL18A1P39060 1754 aa16.78■□□□□ 0.28
CTDP1-206ENST00000590635 ERBB3P21860 1342 aa16.77■□□□□ 0.28
CTDP1-206ENST00000590635 DDB1Q16531 1140 aa16.77■□□□□ 0.28
CTDP1-206ENST00000590635 EP400Q96L91 3159 aa16.77■□□□□ 0.28
CTDP1-206ENST00000590635 THSD7AQ9UPZ6 1657 aa16.77■□□□□ 0.28
CTDP1-206ENST00000590635 ANKRD24Q8TF21 1146 aa16.76■□□□□ 0.27
CTDP1-206ENST00000590635 BRWD3Q6RI45 1802 aa16.75■□□□□ 0.27
CTDP1-206ENST00000590635 BAG6P46379 1132 aa16.75■□□□□ 0.27
CTDP1-206ENST00000590635 NLRP2Q9NX02 1062 aa16.75■□□□□ 0.27
CTDP1-206ENST00000590635 NSD3Q9BZ95 1437 aa16.75■□□□□ 0.27
CTDP1-206ENST00000590635 MAP3K19Q56UN5 1328 aa16.74■□□□□ 0.27
CTDP1-206ENST00000590635 EXOC5O00471 708 aa16.74■□□□□ 0.27
CTDP1-206ENST00000590635 PANK3Q9H999 370 aa16.74■□□□□ 0.27
CTDP1-206ENST00000590635 KIF24Q5T7B8 1368 aa16.74■□□□□ 0.27
CTDP1-206ENST00000590635 HOXC9P31274 260 aa16.73■□□□□ 0.27
CTDP1-206ENST00000590635 RTL1A6NKG5 1358 aa16.73■□□□□ 0.27
CTDP1-206ENST00000590635 FAM182BQ5T319 152 aa16.72■□□□□ 0.27
CTDP1-206ENST00000590635 IL2RBP14784 551 aa16.71■□□□□ 0.27
CTDP1-206ENST00000590635 MYOM1P52179 1685 aa16.7■□□□□ 0.26
CTDP1-206ENST00000590635 RRS1Q15050 365 aaKnown RBP16.7■□□□□ 0.26
CTDP1-206ENST00000590635 KNSTRNQ9Y448 316 aa16.7■□□□□ 0.26
CTDP1-206ENST00000590635 FBLN1P23142 703 aa16.69■□□□□ 0.26
CTDP1-206ENST00000590635 LTV1Q96GA3 475 aaPredicted RBP16.69■□□□□ 0.26
CTDP1-206ENST00000590635 SMG6Q86US8 1419 aaKnown RBP16.69■□□□□ 0.26
CTDP1-206ENST00000590635 LTN1O94822 1766 aa16.69■□□□□ 0.26
CTDP1-206ENST00000590635 NSD2O96028 1365 aa16.68■□□□□ 0.26
CTDP1-206ENST00000590635 TRIM37O94972 964 aa16.68■□□□□ 0.26
CTDP1-206ENST00000590635 DEFB132Q7Z7B7 95 aa16.68■□□□□ 0.26
CTDP1-206ENST00000590635 OVOS2A0A0G2JMS6 1433 aa16.68■□□□□ 0.26
CTDP1-206ENST00000590635 KIF7Q2M1P5 1343 aa16.68■□□□□ 0.26
CTDP1-206ENST00000590635 PARP4Q9UKK3 1724 aaKnown RBP16.67■□□□□ 0.26
CTDP1-206ENST00000590635 INSRP06213 1382 aa16.67■□□□□ 0.26
CTDP1-206ENST00000590635 FLT4P35916 1363 aa16.67■□□□□ 0.26
CTDP1-206ENST00000590635 RGPD5Q99666 1765 aa16.67■□□□□ 0.26
CTDP1-206ENST00000590635 DISP2A7MBM2 1401 aa16.67■□□□□ 0.26
CTDP1-206ENST00000590635 BCL9O00512 1426 aa16.65■□□□□ 0.26
CTDP1-206ENST00000590635 APBA3O96018 575 aa16.65■□□□□ 0.26
CTDP1-206ENST00000590635 HSP90AB2PQ58FF8 381 aa16.65■□□□□ 0.26
CTDP1-206ENST00000590635 MARCH10Q8NA82 808 aaPredicted RBP16.65■□□□□ 0.26
CTDP1-206ENST00000590635 KIF20BQ96Q89 1820 aa16.65■□□□□ 0.26
CTDP1-206ENST00000590635 PARD3Q8TEW0 1356 aa16.64■□□□□ 0.26
CTDP1-206ENST00000590635 PPM1GO15355 546 aaPredicted RBP16.64■□□□□ 0.25
CTDP1-206ENST00000590635 WASHC2AQ641Q2 1341 aa16.64■□□□□ 0.25
CTDP1-206ENST00000590635 EN1Q05925 392 aaPredicted RBP16.63■□□□□ 0.25
CTDP1-206ENST00000590635 BCL11BQ9C0K0 894 aaPredicted RBP16.63■□□□□ 0.25
CTDP1-206ENST00000590635 TNS2Q63HR2 1409 aa16.62■□□□□ 0.25
CTDP1-206ENST00000590635 RGPD1P0DJD0 1748 aa16.62■□□□□ 0.25
CTDP1-206ENST00000590635 MORC1Q86VD1 984 aa16.62■□□□□ 0.25
CTDP1-206ENST00000590635 POLKQ9UBT6 870 aa16.62■□□□□ 0.25
CTDP1-206ENST00000590635 EMILIN1Q9Y6C2 1016 aa16.62■□□□□ 0.25
CTDP1-206ENST00000590635 FAM208AQ9UK61 1670 aaKnown RBP16.62■□□□□ 0.25
CTDP1-206ENST00000590635 NBPF6Q5VWK0 638 aa16.61■□□□□ 0.25
CTDP1-206ENST00000590635 RAPGEF4Q8WZA2 1011 aa16.61■□□□□ 0.25
CTDP1-206ENST00000590635 NBPF4Q96M43 638 aa16.61■□□□□ 0.25
CTDP1-206ENST00000590635 LRRC37A3O60309 1634 aa16.6■□□□□ 0.25
CTDP1-206ENST00000590635 PLSCR1O15162 318 aa16.6■□□□□ 0.25
CTDP1-206ENST00000590635 TNNT2P45379 298 aaPredicted RBP16.6■□□□□ 0.25
CTDP1-206ENST00000590635 CAMKK2Q96RR4 588 aa16.6■□□□□ 0.25
CTDP1-206ENST00000590635 ZCRB1Q8TBF4 217 aaKnown RBP16.59■□□□□ 0.25
CTDP1-206ENST00000590635 PER1O15534 1290 aaPredicted RBP16.58■□□□□ 0.24
CTDP1-206ENST00000590635 TATP17735 454 aaPredicted RBP16.58■□□□□ 0.24
CTDP1-206ENST00000590635 EZH2Q15910 746 aaKnown RBP16.58■□□□□ 0.24
CTDP1-206ENST00000590635 AMER1Q5JTC6 1135 aaPredicted RBP16.58■□□□□ 0.24
CTDP1-206ENST00000590635 WNK3Q9BYP7 1800 aa16.57■□□□□ 0.24
CTDP1-206ENST00000590635 DDX54Q8TDD1 881 aaKnown RBP16.57■□□□□ 0.24
CTDP1-206ENST00000590635 NBPF14Q5TI25 921 aa16.56■□□□□ 0.24
CTDP1-206ENST00000590635 PEAK1Q9H792 1746 aa16.55■□□□□ 0.24
CTDP1-206ENST00000590635 USHBP1Q8N6Y0 703 aa16.54■□□□□ 0.24
CTDP1-206ENST00000590635 NPC1L1Q9UHC9 1359 aa16.53■□□□□ 0.24
CTDP1-206ENST00000590635 EYA1Q99502 592 aa16.53■□□□□ 0.24
CTDP1-206ENST00000590635 TNS1Q9HBL0 1735 aaKnown RBP16.53■□□□□ 0.24
CTDP1-206ENST00000590635 ANKRD26Q9UPS8 1709 aa16.53■□□□□ 0.24
CTDP1-206ENST00000590635 EIF4A2Q14240 407 aaKnown RBP16.52■□□□□ 0.24
CTDP1-206ENST00000590635 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.52■□□□□ 0.24
CTDP1-206ENST00000590635 SPG7Q9UQ90 795 aa16.52■□□□□ 0.24
CTDP1-206ENST00000590635 MAP2P11137 1827 aaKnown RBP16.52■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 168.1 ms