RNA–Protein interactions for RNA: ENST00000590530.5

GCDH-212, Transcript of glutaryl-CoA dehydrogenase, humanhuman

TSL 2

Gene GCDH, Length 1,871 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCDH-212ENST00000590530 ARHGEF10O15013 1369 aa22.45■■□□□ 1.19
GCDH-212ENST00000590530 TOM1O60784 492 aa22.45■■□□□ 1.19
GCDH-212ENST00000590530 LTV1Q96GA3 475 aaPredicted RBP22.45■■□□□ 1.19
GCDH-212ENST00000590530 AEBP1Q8IUX7 1158 aa22.45■■□□□ 1.18
GCDH-212ENST00000590530 RRP7AQ9Y3A4 280 aaKnown RBP22.45■■□□□ 1.18
GCDH-212ENST00000590530 PDE3BQ13370 1112 aa22.44■■□□□ 1.18
GCDH-212ENST00000590530 CERKQ8TCT0 537 aa22.44■■□□□ 1.18
GCDH-212ENST00000590530 AXIN2Q9Y2T1 843 aa22.44■■□□□ 1.18
GCDH-212ENST00000590530 IP6K1Q92551 441 aa22.43■■□□□ 1.18
GCDH-212ENST00000590530 RUNDC1Q96C34 613 aa22.43■■□□□ 1.18
GCDH-212ENST00000590530 RSPH6AQ9H0K4 717 aa22.43■■□□□ 1.18
GCDH-212ENST00000590530 LTN1O94822 1766 aa22.42■■□□□ 1.18
GCDH-212ENST00000590530 TCP11L2Q8N4U5 519 aa22.41■■□□□ 1.18
GCDH-212ENST00000590530 PHRF1Q9P1Y6 1649 aaKnown RBP22.41■■□□□ 1.18
GCDH-212ENST00000590530 PRKAR2BP31323 418 aa22.41■■□□□ 1.18
GCDH-212ENST00000590530 CHRNA2Q15822 529 aa22.41■■□□□ 1.18
GCDH-212ENST00000590530 EYA1Q99502 592 aa22.41■■□□□ 1.18
GCDH-212ENST00000590530 AHDC1Q5TGY3 1603 aaPredicted RBP22.4■■□□□ 1.18
GCDH-212ENST00000590530 CRYBG1Q9Y4K1 1723 aa22.4■■□□□ 1.18
GCDH-212ENST00000590530 NEUROD2Q15784 382 aa22.4■■□□□ 1.18
GCDH-212ENST00000590530 SULT6B1Q6IMI4 303 aa22.4■■□□□ 1.18
GCDH-212ENST00000590530 PHACTR3Q96KR7 559 aa22.4■■□□□ 1.18
GCDH-212ENST00000590530 KIF24Q5T7B8 1368 aa22.4■■□□□ 1.18
GCDH-212ENST00000590530 RTL1A6NKG5 1358 aa22.39■■□□□ 1.17
GCDH-212ENST00000590530 IQSEC2Q5JU85 1478 aa22.39■■□□□ 1.17
GCDH-212ENST00000590530 FCHSD2O94868 740 aa22.39■■□□□ 1.17
GCDH-212ENST00000590530 NGEFQ8N5V2 710 aa22.39■■□□□ 1.17
GCDH-212ENST00000590530 CDCA7LQ96GN5 454 aa22.38■■□□□ 1.17
GCDH-212ENST00000590530 KIAA0232Q92628 1395 aa22.38■■□□□ 1.17
GCDH-212ENST00000590530 LRRC59Q96AG4 307 aaKnown RBP22.37■■□□□ 1.17
GCDH-212ENST00000590530 USHBP1Q8N6Y0 703 aa22.37■■□□□ 1.17
GCDH-212ENST00000590530 RGPD1P0DJD0 1748 aa22.36■■□□□ 1.17
GCDH-212ENST00000590530 NEFLP07196 543 aa22.35■■□□□ 1.17
GCDH-212ENST00000590530 IGSF1Q8N6C5 1336 aa22.35■■□□□ 1.17
GCDH-212ENST00000590530 ZNF521Q96K83 1311 aa22.35■■□□□ 1.17
GCDH-212ENST00000590530 NBPF6Q5VWK0 638 aa22.34■■□□□ 1.17
GCDH-212ENST00000590530 NBPF4Q96M43 638 aa22.34■■□□□ 1.17
GCDH-212ENST00000590530 ANKRD24Q8TF21 1146 aa22.33■■□□□ 1.17
GCDH-212ENST00000590530 SUPT16HQ9Y5B9 1047 aaKnown RBP22.33■■□□□ 1.17
GCDH-212ENST00000590530 TMPOP42166 694 aaKnown RBP22.32■■□□□ 1.16
GCDH-212ENST00000590530 HAP1P54257 671 aaPredicted RBP22.32■■□□□ 1.16
GCDH-212ENST00000590530 COL16A1Q07092 1604 aaPredicted RBP22.32■■□□□ 1.16
GCDH-212ENST00000590530 MAPK8IP3Q9UPT6 1336 aa22.32■■□□□ 1.16
GCDH-212ENST00000590530 SPINK5Q9NQ38 1064 aaPredicted RBP22.32■■□□□ 1.16
GCDH-212ENST00000590530 PHLPP1O60346 1717 aa22.32■■□□□ 1.16
GCDH-212ENST00000590530 CPDO75976 1380 aa22.32■■□□□ 1.16
GCDH-212ENST00000590530 WWC1Q8IX03 1113 aa22.3■■□□□ 1.16
GCDH-212ENST00000590530 COL18A1P39060 1754 aa22.3■■□□□ 1.16
GCDH-212ENST00000590530 ABCA3Q99758 1704 aa22.3■■□□□ 1.16
GCDH-212ENST00000590530 PRDM11Q9NQV5 511 aa22.3■■□□□ 1.16
GCDH-212ENST00000590530 RGPD5Q99666 1765 aa22.29■■□□□ 1.16
GCDH-212ENST00000590530 NCBP3Q53F19 620 aaKnown RBP22.29■■□□□ 1.16
GCDH-212ENST00000590530 PHF23Q9BUL5 403 aaPredicted RBP22.29■■□□□ 1.16
GCDH-212ENST00000590530 FAM83GA6ND36 823 aa22.28■■□□□ 1.16
GCDH-212ENST00000590530 TRIM35Q9UPQ4 493 aa22.28■■□□□ 1.16
GCDH-212ENST00000590530 KDRP35968 1356 aa22.28■■□□□ 1.16
GCDH-212ENST00000590530 ERBB3P21860 1342 aa22.28■■□□□ 1.16
GCDH-212ENST00000590530 RIPK4P57078 832 aa22.27■■□□□ 1.16
GCDH-212ENST00000590530 FKBP8Q14318 412 aa22.27■■□□□ 1.16
GCDH-212ENST00000590530 PNNQ9H307 717 aaKnown RBP22.27■■□□□ 1.16
GCDH-212ENST00000590530 RGPD2P0DJD1 1756 aa22.26■■□□□ 1.15
GCDH-212ENST00000590530 RNF123Q5XPI4 1314 aa22.25■■□□□ 1.15
GCDH-212ENST00000590530 NFE2L2Q16236 605 aa22.25■■□□□ 1.15
GCDH-212ENST00000590530 CAMTA1Q9Y6Y1 1673 aa22.25■■□□□ 1.15
GCDH-212ENST00000590530 GOLGA2Q08379 1002 aa22.23■■□□□ 1.15
GCDH-212ENST00000590530 MTHFSDQ2M296 383 aaKnown RBP22.23■■□□□ 1.15
GCDH-212ENST00000590530 THUMPD2Q9BTF0 503 aaKnown RBP22.23■■□□□ 1.15
GCDH-212ENST00000590530 CCDC27Q2M243 656 aa22.22■■□□□ 1.15
GCDH-212ENST00000590530 COL22A1Q8NFW1 1626 aaPredicted RBP22.22■■□□□ 1.15
GCDH-212ENST00000590530 NUTM2BA6NNL0 878 aaPredicted RBP22.22■■□□□ 1.15
GCDH-212ENST00000590530 NUTM2EB1AL46 878 aaPredicted RBP22.22■■□□□ 1.15
GCDH-212ENST00000590530 NEFMP07197 916 aa22.22■■□□□ 1.15
GCDH-212ENST00000590530 NUTM2AQ8IVF1 878 aaPredicted RBP22.22■■□□□ 1.15
GCDH-212ENST00000590530 NLRP2Q9NX02 1062 aa22.22■■□□□ 1.15
GCDH-212ENST00000590530 ADAMTS2O95450 1211 aa22.21■■□□□ 1.15
GCDH-212ENST00000590530 CSB-PGBD3P0DP91 1061 aa22.21■■□□□ 1.15
GCDH-212ENST00000590530 SLFN5Q08AF3 891 aa22.21■■□□□ 1.15
GCDH-212ENST00000590530 DCTN1Q14203 1278 aa22.2■■□□□ 1.14
GCDH-212ENST00000590530 LMO7Q8WWI1 1683 aa22.2■■□□□ 1.14
GCDH-212ENST00000590530 DUSP27Q5VZP5 1158 aa22.2■■□□□ 1.14
GCDH-212ENST00000590530 ERICH6BQ5W0A0 696 aa22.2■■□□□ 1.14
GCDH-212ENST00000590530 NCAPD2Q15021 1401 aa22.19■■□□□ 1.14
GCDH-212ENST00000590530 HSPA1LP34931 641 aa22.19■■□□□ 1.14
GCDH-212ENST00000590530 TRMT2AQ8IZ69 625 aaKnown RBP22.18■■□□□ 1.14
GCDH-212ENST00000590530 STRN4Q9NRL3 753 aa22.18■■□□□ 1.14
GCDH-212ENST00000590530 COL5A2P05997 1499 aaPredicted RBP22.18■■□□□ 1.14
GCDH-212ENST00000590530 ABCC6O95255 1503 aa22.17■■□□□ 1.14
GCDH-212ENST00000590530 BTG4Q9NY30 223 aa22.17■■□□□ 1.14
GCDH-212ENST00000590530 E9PSI1 815 aa22.16■■□□□ 1.14
GCDH-212ENST00000590530 LARP1Q6PKG0 1096 aaKnown RBP22.16■■□□□ 1.14
GCDH-212ENST00000590530 WDR63Q8IWG1 891 aa22.16■■□□□ 1.14
GCDH-212ENST00000590530 RCAN3Q9UKA8 241 aa22.16■■□□□ 1.14
GCDH-212ENST00000590530 WDR17Q8IZU2 1322 aa22.14■■□□□ 1.14
GCDH-212ENST00000590530 MCM10Q7L590 875 aa22.14■■□□□ 1.13
GCDH-212ENST00000590530 FAM208AQ9UK61 1670 aaKnown RBP22.13■■□□□ 1.13
GCDH-212ENST00000590530 TOM1L2Q6ZVM7 507 aa22.13■■□□□ 1.13
GCDH-212ENST00000590530 EVA1CP58658 441 aa22.12■■□□□ 1.13
GCDH-212ENST00000590530 TSR2Q969E8 191 aaKnown RBP22.12■■□□□ 1.13
GCDH-212ENST00000590530 JCADQ9P266 1359 aa22.12■■□□□ 1.13
GCDH-212ENST00000590530 DLG5Q8TDM6 1919 aa22.12■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms