RNA–Protein interactions for RNA: ENST00000590234.5

CXXC1-213, Transcript of CXXC finger protein 1, humanhuman

TSL 2

Gene CXXC1, Length 784 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC1-213ENST00000590234 SPATA31A7Q8IWB4 1347 aa20.21■□□□□ 0.83
CXXC1-213ENST00000590234 LARP1Q6PKG0 1096 aaKnown RBP20.18■□□□□ 0.82
CXXC1-213ENST00000590234 PANK3Q9H999 370 aa20.18■□□□□ 0.82
CXXC1-213ENST00000590234 AXIN2Q9Y2T1 843 aa20.18■□□□□ 0.82
CXXC1-213ENST00000590234 CGNL1Q0VF96 1302 aa20.18■□□□□ 0.82
CXXC1-213ENST00000590234 SPATA31A1Q5TZJ5 1347 aa20.18■□□□□ 0.82
CXXC1-213ENST00000590234 RGPD5Q99666 1765 aa20.17■□□□□ 0.82
CXXC1-213ENST00000590234 ONECUT3O60422 494 aaPredicted RBP20.16■□□□□ 0.82
CXXC1-213ENST00000590234 FAM98CQ17RN3 349 aaKnown RBP20.16■□□□□ 0.82
CXXC1-213ENST00000590234 SEPT12Q8IYM1 358 aa20.16■□□□□ 0.82
CXXC1-213ENST00000590234 A0A0G2JS52 829 aa20.15■□□□□ 0.82
CXXC1-213ENST00000590234 MYT1Q01538 1121 aa20.15■□□□□ 0.82
CXXC1-213ENST00000590234 USP35Q9P2H5 1018 aa20.15■□□□□ 0.82
CXXC1-213ENST00000590234 CRB1P82279 1406 aa20.15■□□□□ 0.82
CXXC1-213ENST00000590234 CCDC7Q96M83 1385 aa20.14■□□□□ 0.81
CXXC1-213ENST00000590234 THSD7AQ9UPZ6 1657 aa20.13■□□□□ 0.81
CXXC1-213ENST00000590234 WDR17Q8IZU2 1322 aa20.13■□□□□ 0.81
CXXC1-213ENST00000590234 BRWD3Q6RI45 1802 aa20.13■□□□□ 0.81
CXXC1-213ENST00000590234 MAP3K19Q56UN5 1328 aa20.12■□□□□ 0.81
CXXC1-213ENST00000590234 WASHC2AQ641Q2 1341 aa20.12■□□□□ 0.81
CXXC1-213ENST00000590234 CSB-PGBD3P0DP91 1061 aa20.12■□□□□ 0.81
CXXC1-213ENST00000590234 TOM1L2Q6ZVM7 507 aa20.12■□□□□ 0.81
CXXC1-213ENST00000590234 ANKRD26Q9UPS8 1709 aa20.12■□□□□ 0.81
CXXC1-213ENST00000590234 BLMP54132 1417 aaPredicted RBP20.11■□□□□ 0.81
CXXC1-213ENST00000590234 FBLN1P23142 703 aa20.11■□□□□ 0.81
CXXC1-213ENST00000590234 TCP11L2Q8N4U5 519 aa20.11■□□□□ 0.81
CXXC1-213ENST00000590234 THRAP3Q9Y2W1 955 aaKnown RBP20.11■□□□□ 0.81
CXXC1-213ENST00000590234 ERBB3P21860 1342 aa20.1■□□□□ 0.81
CXXC1-213ENST00000590234 AMPHP49418 695 aa20.1■□□□□ 0.81
CXXC1-213ENST00000590234 BARGINQ6ZT62 677 aa20.1■□□□□ 0.81
CXXC1-213ENST00000590234 IP6K1Q92551 441 aa20.1■□□□□ 0.81
CXXC1-213ENST00000590234 RTL1A6NKG5 1358 aa20.09■□□□□ 0.81
CXXC1-213ENST00000590234 RRS1Q15050 365 aaKnown RBP20.09■□□□□ 0.81
CXXC1-213ENST00000590234 KNSTRNQ9Y448 316 aa20.09■□□□□ 0.81
CXXC1-213ENST00000590234 NSD2O96028 1365 aa20.08■□□□□ 0.81
CXXC1-213ENST00000590234 HOXC9P31274 260 aa20.07■□□□□ 0.8
CXXC1-213ENST00000590234 KRT27Q7Z3Y8 459 aa20.07■□□□□ 0.8
CXXC1-213ENST00000590234 ANKRD24Q8TF21 1146 aa20.07■□□□□ 0.8
CXXC1-213ENST00000590234 ZEB1P37275 1124 aaPredicted RBP20.06■□□□□ 0.8
CXXC1-213ENST00000590234 UPF1Q92900 1129 aaKnown RBP eCLIP20.06■□□□□ 0.8
CXXC1-213ENST00000590234 CARD10Q9BWT7 1032 aa20.06■□□□□ 0.8
CXXC1-213ENST00000590234 WNK3Q9BYP7 1800 aa20.06■□□□□ 0.8
CXXC1-213ENST00000590234 FAM208AQ9UK61 1670 aaKnown RBP20.05■□□□□ 0.8
CXXC1-213ENST00000590234 KIF24Q5T7B8 1368 aa20.05■□□□□ 0.8
CXXC1-213ENST00000590234 PARP4Q9UKK3 1724 aaKnown RBP20.05■□□□□ 0.8
CXXC1-213ENST00000590234 NLRP2Q9NX02 1062 aa20.04■□□□□ 0.8
CXXC1-213ENST00000590234 FLT4P35916 1363 aa20.04■□□□□ 0.8
CXXC1-213ENST00000590234 PEAK1Q9H792 1746 aa20.04■□□□□ 0.8
CXXC1-213ENST00000590234 LTV1Q96GA3 475 aaPredicted RBP20.03■□□□□ 0.8
CXXC1-213ENST00000590234 EMILIN1Q9Y6C2 1016 aa20.02■□□□□ 0.8
CXXC1-213ENST00000590234 MAP2P11137 1827 aaKnown RBP20.02■□□□□ 0.79
CXXC1-213ENST00000590234 TNNT2P45379 298 aaPredicted RBP20.01■□□□□ 0.79
CXXC1-213ENST00000590234 AMER1Q5JTC6 1135 aaPredicted RBP20.01■□□□□ 0.79
CXXC1-213ENST00000590234 CDCA7Q9BWT1 371 aaPredicted RBP20.01■□□□□ 0.79
CXXC1-213ENST00000590234 LRRC37A3O60309 1634 aa20.01■□□□□ 0.79
CXXC1-213ENST00000590234 SMG6Q86US8 1419 aaKnown RBP20.01■□□□□ 0.79
CXXC1-213ENST00000590234 INSRP06213 1382 aa20■□□□□ 0.79
CXXC1-213ENST00000590234 PER1O15534 1290 aaPredicted RBP20■□□□□ 0.79
CXXC1-213ENST00000590234 MORC1Q86VD1 984 aa20■□□□□ 0.79
CXXC1-213ENST00000590234 DISP2A7MBM2 1401 aa20■□□□□ 0.79
CXXC1-213ENST00000590234 PPM1GO15355 546 aaPredicted RBP19.99■□□□□ 0.79
CXXC1-213ENST00000590234 PDE3BQ13370 1112 aa19.99■□□□□ 0.79
CXXC1-213ENST00000590234 HSP90AB2PQ58FF8 381 aa19.99■□□□□ 0.79
CXXC1-213ENST00000590234 POLKQ9UBT6 870 aa19.98■□□□□ 0.79
CXXC1-213ENST00000590234 DDB1Q16531 1140 aa19.97■□□□□ 0.79
CXXC1-213ENST00000590234 FAM182BQ5T319 152 aa19.97■□□□□ 0.79
CXXC1-213ENST00000590234 EP400Q96L91 3159 aa19.96■□□□□ 0.79
CXXC1-213ENST00000590234 RGPD2P0DJD1 1756 aa19.96■□□□□ 0.79
CXXC1-213ENST00000590234 IL2RBP14784 551 aa19.95■□□□□ 0.78
CXXC1-213ENST00000590234 NPC1L1Q9UHC9 1359 aa19.95■□□□□ 0.78
CXXC1-213ENST00000590234 CC2D1BQ5T0F9 858 aaKnown RBP19.94■□□□□ 0.78
CXXC1-213ENST00000590234 CCDC125Q86Z20 511 aa19.94■□□□□ 0.78
CXXC1-213ENST00000590234 FAM196AQ6ZSG2 479 aa19.93■□□□□ 0.78
CXXC1-213ENST00000590234 TNS2Q63HR2 1409 aa19.93■□□□□ 0.78
CXXC1-213ENST00000590234 EXOC5O00471 708 aa19.92■□□□□ 0.78
CXXC1-213ENST00000590234 NBPF6Q5VWK0 638 aa19.92■□□□□ 0.78
CXXC1-213ENST00000590234 NBPF4Q96M43 638 aa19.92■□□□□ 0.78
CXXC1-213ENST00000590234 OVOS2A0A0G2JMS6 1433 aa19.92■□□□□ 0.78
CXXC1-213ENST00000590234 RGPD1P0DJD0 1748 aa19.9■□□□□ 0.78
CXXC1-213ENST00000590234 SF3B2Q13435 895 aaKnown RBP19.9■□□□□ 0.78
CXXC1-213ENST00000590234 USHBP1Q8N6Y0 703 aa19.9■□□□□ 0.78
CXXC1-213ENST00000590234 CNGB1Q14028 1251 aaPredicted RBP19.89■□□□□ 0.77
CXXC1-213ENST00000590234 MARCH10Q8NA82 808 aaPredicted RBP19.88■□□□□ 0.77
CXXC1-213ENST00000590234 MEGF6O75095 1541 aa19.87■□□□□ 0.77
CXXC1-213ENST00000590234 EIF4A2Q14240 407 aaKnown RBP19.87■□□□□ 0.77
CXXC1-213ENST00000590234 TNS1Q9HBL0 1735 aaKnown RBP19.87■□□□□ 0.77
CXXC1-213ENST00000590234 RAPGEF4Q8WZA2 1011 aa19.86■□□□□ 0.77
CXXC1-213ENST00000590234 NCAPD2Q15021 1401 aa19.85■□□□□ 0.77
CXXC1-213ENST00000590234 TRIM37O94972 964 aa19.85■□□□□ 0.77
CXXC1-213ENST00000590234 EYA1Q99502 592 aa19.84■□□□□ 0.77
CXXC1-213ENST00000590234 BCL9O00512 1426 aa19.84■□□□□ 0.77
CXXC1-213ENST00000590234 TATP17735 454 aaPredicted RBP19.83■□□□□ 0.77
CXXC1-213ENST00000590234 MTHFSP49914 203 aa19.83■□□□□ 0.77
CXXC1-213ENST00000590234 SBF2Q86WG5 1849 aa19.83■□□□□ 0.76
CXXC1-213ENST00000590234 BAG6P46379 1132 aa19.82■□□□□ 0.76
CXXC1-213ENST00000590234 DEFB132Q7Z7B7 95 aa19.82■□□□□ 0.76
CXXC1-213ENST00000590234 SHANK3Q9BYB0 1731 aa19.82■□□□□ 0.76
CXXC1-213ENST00000590234 ZCRB1Q8TBF4 217 aaKnown RBP19.81■□□□□ 0.76
CXXC1-213ENST00000590234 IGSF1Q8N6C5 1336 aa19.8■□□□□ 0.76
CXXC1-213ENST00000590234 DDX54Q8TDD1 881 aaKnown RBP19.8■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 101.3 ms