RNA–Protein interactions for RNA: ENST00000589990.1

PRKCSH-210, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 2

Gene PRKCSH, Length 567 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-210ENST00000589990 SLIT3O75094 1523 aa18.74■□□□□ 0.59
PRKCSH-210ENST00000589990 AKAP12Q02952 1782 aa18.73■□□□□ 0.59
PRKCSH-210ENST00000589990 AATKQ6ZMQ8 1374 aa18.73■□□□□ 0.59
PRKCSH-210ENST00000589990 NBPF1Q3BBV0 1214 aa18.73■□□□□ 0.59
PRKCSH-210ENST00000589990 TOM1L2Q6ZVM7 507 aa18.73■□□□□ 0.59
PRKCSH-210ENST00000589990 FHDC1Q9C0D6 1143 aaPredicted RBP18.73■□□□□ 0.59
PRKCSH-210ENST00000589990 SYT17Q9BSW7 474 aa18.72■□□□□ 0.59
PRKCSH-210ENST00000589990 RGPD5Q99666 1765 aa18.72■□□□□ 0.59
PRKCSH-210ENST00000589990 PIK3C2AO00443 1686 aa18.72■□□□□ 0.59
PRKCSH-210ENST00000589990 C11orf95C9JLR9 678 aaPredicted RBP18.71■□□□□ 0.59
PRKCSH-210ENST00000589990 SRPK2P78362 688 aaKnown RBP18.71■□□□□ 0.59
PRKCSH-210ENST00000589990 TXNRD1Q16881 649 aa18.71■□□□□ 0.59
PRKCSH-210ENST00000589990 NLRP6P59044 892 aa18.7■□□□□ 0.58
PRKCSH-210ENST00000589990 SGIP1Q9BQI5 828 aa18.7■□□□□ 0.58
PRKCSH-210ENST00000589990 USP6P35125 1406 aa18.69■□□□□ 0.58
PRKCSH-210ENST00000589990 SENP3-EIF4A1A0A087X0R7 540 aa18.69■□□□□ 0.58
PRKCSH-210ENST00000589990 WDR17Q8IZU2 1322 aa18.69■□□□□ 0.58
PRKCSH-210ENST00000589990 SLC15A2Q16348 729 aa18.68■□□□□ 0.58
PRKCSH-210ENST00000589990 STAC3Q96MF2 364 aa18.68■□□□□ 0.58
PRKCSH-210ENST00000589990 STK32BQ9NY57 414 aa18.68■□□□□ 0.58
PRKCSH-210ENST00000589990 CABP1Q9NZU7 370 aa18.68■□□□□ 0.58
PRKCSH-210ENST00000589990 CHD4Q14839 1912 aa18.68■□□□□ 0.58
PRKCSH-210ENST00000589990 BCL9O00512 1426 aa18.67■□□□□ 0.58
PRKCSH-210ENST00000589990 KIAA1210Q9ULL0 1709 aa18.67■□□□□ 0.58
PRKCSH-210ENST00000589990 QRICH2Q9H0J4 1663 aa18.66■□□□□ 0.58
PRKCSH-210ENST00000589990 CPSF1Q10570 1443 aaKnown RBP18.66■□□□□ 0.58
PRKCSH-210ENST00000589990 GOLGB1Q14789 3259 aaKnown RBP18.65■□□□□ 0.58
PRKCSH-210ENST00000589990 SOX12O15370 315 aa18.65■□□□□ 0.58
PRKCSH-210ENST00000589990 C1QTNF8P60827 252 aa18.65■□□□□ 0.58
PRKCSH-210ENST00000589990 MTFR1LQ9H019 292 aa18.64■□□□□ 0.57
PRKCSH-210ENST00000589990 PAPPAQ13219 1627 aa18.63■□□□□ 0.57
PRKCSH-210ENST00000589990 ARHGEF25Q86VW2 580 aa18.63■□□□□ 0.57
PRKCSH-210ENST00000589990 CENPJQ9HC77 1338 aaPredicted RBP18.63■□□□□ 0.57
PRKCSH-210ENST00000589990 ACSBG1Q96GR2 724 aa18.62■□□□□ 0.57
PRKCSH-210ENST00000589990 BRD4O60885 1362 aaPredicted RBP18.62■□□□□ 0.57
PRKCSH-210ENST00000589990 NHSQ6T4R5 1651 aa18.62■□□□□ 0.57
PRKCSH-210ENST00000589990 CARD10Q9BWT7 1032 aa18.61■□□□□ 0.57
PRKCSH-210ENST00000589990 CEP350Q5VT06 3117 aa18.61■□□□□ 0.57
PRKCSH-210ENST00000589990 CSB-PGBD3P0DP91 1061 aa18.6■□□□□ 0.57
PRKCSH-210ENST00000589990 ZNF827Q17R98 1081 aa18.6■□□□□ 0.57
PRKCSH-210ENST00000589990 ARXQ96QS3 562 aa18.6■□□□□ 0.57
PRKCSH-210ENST00000589990 CDCA7Q9BWT1 371 aaPredicted RBP18.6■□□□□ 0.57
PRKCSH-210ENST00000589990 TNS2Q63HR2 1409 aa18.59■□□□□ 0.57
PRKCSH-210ENST00000589990 EXOC5O00471 708 aa18.59■□□□□ 0.57
PRKCSH-210ENST00000589990 TRPM1Q7Z4N2 1603 aa18.59■□□□□ 0.57
PRKCSH-210ENST00000589990 NFAT5O94916 1531 aa18.59■□□□□ 0.57
PRKCSH-210ENST00000589990 TTC21BQ7Z4L5 1316 aa18.57■□□□□ 0.56
PRKCSH-210ENST00000589990 BTAF1O14981 1849 aa18.57■□□□□ 0.56
PRKCSH-210ENST00000589990 LRRC4BQ9NT99 713 aa18.56■□□□□ 0.56
PRKCSH-210ENST00000589990 MAP3K5Q99683 1374 aa18.55■□□□□ 0.56
PRKCSH-210ENST00000589990 ABCC6O95255 1503 aa18.54■□□□□ 0.56
PRKCSH-210ENST00000589990 GPR162Q16538 588 aa18.53■□□□□ 0.56
PRKCSH-210ENST00000589990 KLHL34Q8N239 644 aa18.53■□□□□ 0.56
PRKCSH-210ENST00000589990 CCDC7Q96M83 1385 aa18.53■□□□□ 0.56
PRKCSH-210ENST00000589990 SHANK3Q9BYB0 1731 aa18.52■□□□□ 0.56
PRKCSH-210ENST00000589990 KCNH5Q8NCM2 988 aa18.52■□□□□ 0.56
PRKCSH-210ENST00000589990 TUBGCP6Q96RT7 1819 aa18.51■□□□□ 0.55
PRKCSH-210ENST00000589990 KAT6BQ8WYB5 2073 aa18.5■□□□□ 0.55
PRKCSH-210ENST00000589990 KCNQ4P56696 695 aa18.5■□□□□ 0.55
PRKCSH-210ENST00000589990 IFFO2Q5TF58 517 aa18.5■□□□□ 0.55
PRKCSH-210ENST00000589990 PELP1Q8IZL8 1130 aaKnown RBP18.5■□□□□ 0.55
PRKCSH-210ENST00000589990 NLGN2Q8NFZ4 835 aa18.5■□□□□ 0.55
PRKCSH-210ENST00000589990 GIGYF1O75420 1035 aaPredicted RBP18.49■□□□□ 0.55
PRKCSH-210ENST00000589990 AKT1S1Q96B36 256 aa18.49■□□□□ 0.55
PRKCSH-210ENST00000589990 COL24A1Q17RW2 1714 aa18.49■□□□□ 0.55
PRKCSH-210ENST00000589990 NLRP2Q9NX02 1062 aa18.48■□□□□ 0.55
PRKCSH-210ENST00000589990 ERBB3P21860 1342 aa18.48■□□□□ 0.55
PRKCSH-210ENST00000589990 EVC2Q86UK5 1308 aa18.48■□□□□ 0.55
PRKCSH-210ENST00000589990 LTN1O94822 1766 aa18.47■□□□□ 0.55
PRKCSH-210ENST00000589990 PNPLA7Q6ZV29 1317 aa18.47■□□□□ 0.55
PRKCSH-210ENST00000589990 TTC21AQ8NDW8 1320 aa18.47■□□□□ 0.55
PRKCSH-210ENST00000589990 QSER1Q2KHR3 1735 aa18.46■□□□□ 0.55
PRKCSH-210ENST00000589990 MON2Q7Z3U7 1717 aa18.46■□□□□ 0.55
PRKCSH-210ENST00000589990 ZNF692Q9BU19 519 aaPredicted RBP18.46■□□□□ 0.55
PRKCSH-210ENST00000589990 KTN1Q86UP2 1357 aaKnown RBP18.45■□□□□ 0.54
PRKCSH-210ENST00000589990 IL2RBP14784 551 aa18.45■□□□□ 0.54
PRKCSH-210ENST00000589990 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.45■□□□□ 0.54
PRKCSH-210ENST00000589990 YBX3P16989 372 aaKnown RBP eCLIP18.44■□□□□ 0.54
PRKCSH-210ENST00000589990 NME9Q86XW9 330 aa18.44■□□□□ 0.54
PRKCSH-210ENST00000589990 USP54Q70EL1 1684 aa18.42■□□□□ 0.54
PRKCSH-210ENST00000589990 ANKRD24Q8TF21 1146 aa18.42■□□□□ 0.54
PRKCSH-210ENST00000589990 CD163L1Q9NR16 1453 aa18.41■□□□□ 0.54
PRKCSH-210ENST00000589990 POLD1P28340 1107 aa18.41■□□□□ 0.54
PRKCSH-210ENST00000589990 L3MBTL2Q969R5 705 aa18.41■□□□□ 0.54
PRKCSH-210ENST00000589990 USP31Q70CQ4 1352 aa18.41■□□□□ 0.54
PRKCSH-210ENST00000589990 DDX54Q8TDD1 881 aaKnown RBP18.4■□□□□ 0.54
PRKCSH-210ENST00000589990 SLC16A10Q8TF71 515 aa18.4■□□□□ 0.54
PRKCSH-210ENST00000589990 SBNO2Q9Y2G9 1366 aa18.4■□□□□ 0.54
PRKCSH-210ENST00000589990 TFCP2L1Q9NZI6 479 aa18.39■□□□□ 0.53
PRKCSH-210ENST00000589990 DOT1LQ8TEK3 1739 aa18.39■□□□□ 0.53
PRKCSH-210ENST00000589990 LY75O60449 1722 aa18.38■□□□□ 0.53
PRKCSH-210ENST00000589990 NSD2O96028 1365 aa18.38■□□□□ 0.53
PRKCSH-210ENST00000589990 SLC27A3Q5K4L6 730 aa18.37■□□□□ 0.53
PRKCSH-210ENST00000589990 PRIM1P49642 420 aaKnown RBP18.36■□□□□ 0.53
PRKCSH-210ENST00000589990 SYTL4Q96C24 671 aaPredicted RBP18.36■□□□□ 0.53
PRKCSH-210ENST00000589990 ATP10DQ9P241 1426 aa18.36■□□□□ 0.53
PRKCSH-210ENST00000589990 MSL1Q68DK7 614 aa18.35■□□□□ 0.53
PRKCSH-210ENST00000589990 LTV1Q96GA3 475 aaPredicted RBP18.35■□□□□ 0.53
PRKCSH-210ENST00000589990 ROCK2O75116 1388 aaKnown RBP18.34■□□□□ 0.53
PRKCSH-210ENST00000589990 COL23A1Q86Y22 540 aaPredicted RBP18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms