RNA–Protein interactions for RNA: ENST00000589532.5

LSM7-205, Transcript of LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated, human

TSL 3

Gene LSM7, Length 539 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LSM7-205	ENST00000589532	PSD	A5PKW4	1024 aa	Predicted RBP	33.87	■■■■□ 3.01
LSM7-205	ENST00000589532	PDE3B	Q13370	1112 aa		33.87	■■■■□ 3.01
LSM7-205	ENST00000589532	EZH2	Q15910	746 aa	Known RBP	33.87	■■■■□ 3.01
LSM7-205	ENST00000589532	ARHGEF25	Q86VW2	580 aa		33.87	■■■■□ 3.01
LSM7-205	ENST00000589532	AXIN2	Q9Y2T1	843 aa		33.87	■■■■□ 3.01
LSM7-205	ENST00000589532	WDR17	Q8IZU2	1322 aa		33.85	■■■■□ 3.01
LSM7-205	ENST00000589532	USP31	Q70CQ4	1352 aa		33.85	■■■■□ 3.01
LSM7-205	ENST00000589532	SBF2	Q86WG5	1849 aa		33.84	■■■■□ 3.01
LSM7-205	ENST00000589532	ZBTB7C	A1YPR0	619 aa		33.84	■■■■□ 3.01
LSM7-205	ENST00000589532	KCNH5	Q8NCM2	988 aa		33.84	■■■■□ 3.01
LSM7-205	ENST00000589532	OVOS2	A0A0G2JMS6	1433 aa		33.83	■■■■□ 3.01
LSM7-205	ENST00000589532	OVOS2	A0A0J9YW53	1432 aa		33.83	■■■■□ 3.01
LSM7-205	ENST00000589532	OVOS2	Q6IE36	1432 aa		33.83	■■■■□ 3.01
LSM7-205	ENST00000589532	RGPD3	A6NKT7	1758 aa	Predicted RBP	33.83	■■■■□ 3.01
LSM7-205	ENST00000589532	RGPD4	Q7Z3J3	1758 aa		33.83	■■■■□ 3.01
LSM7-205	ENST00000589532	APBA3	O96018	575 aa		33.78	■■■■□ 3
LSM7-205	ENST00000589532	TOM1L2	Q6ZVM7	507 aa		33.77	■■■■□ 3
LSM7-205	ENST00000589532	PCGF6	Q9BYE7	350 aa		33.77	■■■■□ 3
LSM7-205	ENST00000589532	LTN1	O94822	1766 aa		33.77	■■■■□ 3
LSM7-205	ENST00000589532	R3HDM1	Q15032	1099 aa	Known RBP	33.76	■■■□□ 2.99
LSM7-205	ENST00000589532	EDC4	Q6P2E9	1401 aa	Known RBP	33.76	■■■□□ 2.99
LSM7-205	ENST00000589532		A0A1W2PP64	1363 aa		33.74	■■■□□ 2.99
LSM7-205	ENST00000589532	BCL9	O00512	1426 aa		33.74	■■■□□ 2.99
LSM7-205	ENST00000589532	SOX12	O15370	315 aa		33.73	■■■□□ 2.99
LSM7-205	ENST00000589532	C11orf95	C9JLR9	678 aa	Predicted RBP	33.72	■■■□□ 2.99
LSM7-205	ENST00000589532	PUS7	Q96PZ0	661 aa	Known RBP	33.72	■■■□□ 2.99
LSM7-205	ENST00000589532	TESK2	Q96S53	571 aa		33.72	■■■□□ 2.99
LSM7-205	ENST00000589532	DDB1	Q16531	1140 aa		33.71	■■■□□ 2.99
LSM7-205	ENST00000589532	NME9	Q86XW9	330 aa		33.71	■■■□□ 2.99
LSM7-205	ENST00000589532	CARD10	Q9BWT7	1032 aa		33.71	■■■□□ 2.99
LSM7-205	ENST00000589532	SUGP2	Q8IX01	1082 aa	Known RBP eCLIP	33.7	■■■□□ 2.99
LSM7-205	ENST00000589532	SLC12A5	Q9H2X9	1139 aa		33.7	■■■□□ 2.99
LSM7-205	ENST00000589532	CDCA7	Q9BWT1	371 aa	Predicted RBP	33.68	■■■□□ 2.98
LSM7-205	ENST00000589532	CCDC7	Q96M83	1385 aa		33.67	■■■□□ 2.98
LSM7-205	ENST00000589532	TNS2	Q63HR2	1409 aa		33.67	■■■□□ 2.98
LSM7-205	ENST00000589532	TMC1	Q8TDI8	760 aa		33.66	■■■□□ 2.98
LSM7-205	ENST00000589532	NINL	Q9Y2I6	1382 aa		33.65	■■■□□ 2.98
LSM7-205	ENST00000589532	ERBB3	P21860	1342 aa		33.65	■■■□□ 2.98
LSM7-205	ENST00000589532	HDGFL2	Q7Z4V5	671 aa	Predicted RBP	33.65	■■■□□ 2.98
LSM7-205	ENST00000589532	MARCH10	Q8NA82	808 aa	Predicted RBP	33.65	■■■□□ 2.98
LSM7-205	ENST00000589532	ST20-MTHFS	A0A0A6YYL1	179 aa		33.61	■■■□□ 2.97
LSM7-205	ENST00000589532	CSB-PGBD3	P0DP91	1061 aa		33.61	■■■□□ 2.97
LSM7-205	ENST00000589532	TERF2IP	Q9NYB0	399 aa		33.61	■■■□□ 2.97
LSM7-205	ENST00000589532	PTF1A	Q7RTS3	328 aa		33.6	■■■□□ 2.97
LSM7-205	ENST00000589532	NHS	Q6T4R5	1651 aa		33.58	■■■□□ 2.97
LSM7-205	ENST00000589532	PLSCR1	O15162	318 aa		33.57	■■■□□ 2.96
LSM7-205	ENST00000589532	BCL11B	Q9C0K0	894 aa	Predicted RBP	33.57	■■■□□ 2.96
LSM7-205	ENST00000589532	FAM208A	Q9UK61	1670 aa	Known RBP	33.57	■■■□□ 2.96
LSM7-205	ENST00000589532	CASZ1	Q86V15	1759 aa		33.54	■■■□□ 2.96
LSM7-205	ENST00000589532	ANKRD36B	Q8N2N9	1353 aa		33.51	■■■□□ 2.96
LSM7-205	ENST00000589532	USP47	Q96K76	1375 aa		33.51	■■■□□ 2.96
LSM7-205	ENST00000589532	NBPF14	Q5TI25	921 aa		33.51	■■■□□ 2.95
LSM7-205	ENST00000589532	ANKRD24	Q8TF21	1146 aa		33.49	■■■□□ 2.95
LSM7-205	ENST00000589532	ANO8	Q9HCE9	1232 aa	Predicted RBP	33.49	■■■□□ 2.95
LSM7-205	ENST00000589532	EXOC5	O00471	708 aa		33.48	■■■□□ 2.95
LSM7-205	ENST00000589532	SLC24A1	O60721	1099 aa		33.47	■■■□□ 2.95
LSM7-205	ENST00000589532	PROM2	Q8N271	834 aa		33.47	■■■□□ 2.95
LSM7-205	ENST00000589532	NLRP2	Q9NX02	1062 aa		33.46	■■■□□ 2.95
LSM7-205	ENST00000589532	MYOM1	P52179	1685 aa		33.45	■■■□□ 2.94
LSM7-205	ENST00000589532	IP6K1	Q92551	441 aa		33.44	■■■□□ 2.94
LSM7-205	ENST00000589532	IL2RB	P14784	551 aa		33.43	■■■□□ 2.94
LSM7-205	ENST00000589532	PAPPA	Q13219	1627 aa		33.42	■■■□□ 2.94
LSM7-205	ENST00000589532	MAP3K19	Q56UN5	1328 aa		33.41	■■■□□ 2.94
LSM7-205	ENST00000589532	BTAF1	O14981	1849 aa		33.41	■■■□□ 2.94
LSM7-205	ENST00000589532	SHANK3	Q9BYB0	1731 aa		33.4	■■■□□ 2.94
LSM7-205	ENST00000589532	KIF20B	Q96Q89	1820 aa		33.39	■■■□□ 2.94
LSM7-205	ENST00000589532	RGPD2	P0DJD1	1756 aa		33.39	■■■□□ 2.94
LSM7-205	ENST00000589532	KCNQ2	O43526	872 aa		33.39	■■■□□ 2.94
LSM7-205	ENST00000589532	COG3	Q96JB2	828 aa		33.38	■■■□□ 2.93
LSM7-205	ENST00000589532	TMF1	P82094	1093 aa		33.37	■■■□□ 2.93
LSM7-205	ENST00000589532	RTL1	A6NKG5	1358 aa		33.36	■■■□□ 2.93
LSM7-205	ENST00000589532	TXNRD1	Q16881	649 aa		33.36	■■■□□ 2.93
LSM7-205	ENST00000589532	HOXC9	P31274	260 aa		33.35	■■■□□ 2.93
LSM7-205	ENST00000589532	FBLN1	P23142	703 aa		33.33	■■■□□ 2.93
LSM7-205	ENST00000589532	SPON1	Q9HCB6	807 aa		33.32	■■■□□ 2.92
LSM7-205	ENST00000589532	ACSBG1	Q96GR2	724 aa		33.31	■■■□□ 2.92
LSM7-205	ENST00000589532	MEGF6	O75095	1541 aa		33.3	■■■□□ 2.92
LSM7-205	ENST00000589532	FYB1	O15117	783 aa		33.3	■■■□□ 2.92
LSM7-205	ENST00000589532	PDGFD	Q9GZP0	370 aa	Predicted RBP	33.3	■■■□□ 2.92
LSM7-205	ENST00000589532	DOT1L	Q8TEK3	1739 aa		33.29	■■■□□ 2.92
LSM7-205	ENST00000589532	CLSPN	Q9HAW4	1339 aa		33.28	■■■□□ 2.92
LSM7-205	ENST00000589532	LTV1	Q96GA3	475 aa	Predicted RBP	33.28	■■■□□ 2.92
LSM7-205	ENST00000589532	TIMELESS	Q9UNS1	1208 aa		33.27	■■■□□ 2.92
LSM7-205	ENST00000589532	GGNBP2	Q9H3C7	697 aa		33.26	■■■□□ 2.91
LSM7-205	ENST00000589532	AMPH	P49418	695 aa		33.24	■■■□□ 2.91
LSM7-205	ENST00000589532	SLC15A2	Q16348	729 aa		33.24	■■■□□ 2.91
LSM7-205	ENST00000589532	ANKRD26	Q9UPS8	1709 aa		33.24	■■■□□ 2.91
LSM7-205	ENST00000589532	RRS1	Q15050	365 aa	Known RBP	33.23	■■■□□ 2.91
LSM7-205	ENST00000589532	CDCA8	Q53HL2	280 aa		33.22	■■■□□ 2.91
LSM7-205	ENST00000589532	STK32B	Q9NY57	414 aa		33.22	■■■□□ 2.91
LSM7-205	ENST00000589532	CCER1	Q8TC90	406 aa	Predicted RBP	33.2	■■■□□ 2.91
LSM7-205	ENST00000589532	NSD2	O96028	1365 aa		33.2	■■■□□ 2.9
LSM7-205	ENST00000589532	NSD3	Q9BZ95	1437 aa		33.19	■■■□□ 2.9
LSM7-205	ENST00000589532	LY75	O60449	1722 aa		33.19	■■■□□ 2.9
LSM7-205	ENST00000589532	QSER1	Q2KHR3	1735 aa		33.19	■■■□□ 2.9
LSM7-205	ENST00000589532	PTGER2	P43116	358 aa		33.19	■■■□□ 2.9
LSM7-205	ENST00000589532	KIF24	Q5T7B8	1368 aa		33.19	■■■□□ 2.9
LSM7-205	ENST00000589532	CARD14	Q9BXL6	1004 aa		33.18	■■■□□ 2.9
LSM7-205	ENST00000589532	PPP1R1B	Q9UD71	204 aa	Predicted RBP	33.17	■■■□□ 2.9
LSM7-205	ENST00000589532	INSR	P06213	1382 aa		33.17	■■■□□ 2.9

Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms