RNA–Protein interactions for RNA: ENST00000589417.1

H3F3B-207, Transcript of H3 histone family member 3B, humanhuman

TSL 2

Gene H3F3B, Length 575 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-207ENST00000589417 FAM98CQ17RN3 349 aaKnown RBP24.35■■□□□ 1.49
H3F3B-207ENST00000589417 MYOM1P52179 1685 aa24.34■■□□□ 1.49
H3F3B-207ENST00000589417 SOX12O15370 315 aa24.33■■□□□ 1.49
H3F3B-207ENST00000589417 TCP11L2Q8N4U5 519 aa24.32■■□□□ 1.48
H3F3B-207ENST00000589417 CRB1P82279 1406 aa24.32■■□□□ 1.48
H3F3B-207ENST00000589417 WDR17Q8IZU2 1322 aa24.32■■□□□ 1.48
H3F3B-207ENST00000589417 ZBTB7CA1YPR0 619 aa24.31■■□□□ 1.48
H3F3B-207ENST00000589417 NSD3Q9BZ95 1437 aa24.29■■□□□ 1.48
H3F3B-207ENST00000589417 KRT27Q7Z3Y8 459 aa24.29■■□□□ 1.48
H3F3B-207ENST00000589417 GGNBP2Q9H3C7 697 aa24.29■■□□□ 1.48
H3F3B-207ENST00000589417 THSD7AQ9UPZ6 1657 aa24.27■■□□□ 1.48
H3F3B-207ENST00000589417 CCDC125Q86Z20 511 aa24.27■■□□□ 1.48
H3F3B-207ENST00000589417 IP6K1Q92551 441 aa24.27■■□□□ 1.48
H3F3B-207ENST00000589417 CARD10Q9BWT7 1032 aa24.27■■□□□ 1.48
H3F3B-207ENST00000589417 POLR3GLQ9BT43 218 aa24.26■■□□□ 1.47
H3F3B-207ENST00000589417 PANK3Q9H999 370 aa24.26■■□□□ 1.47
H3F3B-207ENST00000589417 CGNL1Q0VF96 1302 aa24.26■■□□□ 1.47
H3F3B-207ENST00000589417 KIF7Q2M1P5 1343 aa24.26■■□□□ 1.47
H3F3B-207ENST00000589417 TOM1L2Q6ZVM7 507 aa24.25■■□□□ 1.47
H3F3B-207ENST00000589417 USP35Q9P2H5 1018 aa24.25■■□□□ 1.47
H3F3B-207ENST00000589417 ERBB3P21860 1342 aa24.25■■□□□ 1.47
H3F3B-207ENST00000589417 MAP3K19Q56UN5 1328 aa24.25■■□□□ 1.47
H3F3B-207ENST00000589417 BLMP54132 1417 aaPredicted RBP24.25■■□□□ 1.47
H3F3B-207ENST00000589417 EP400Q96L91 3159 aa24.24■■□□□ 1.47
H3F3B-207ENST00000589417 A0A0G2JS52 829 aa24.22■■□□□ 1.47
H3F3B-207ENST00000589417 MYT1Q01538 1121 aa24.22■■□□□ 1.47
H3F3B-207ENST00000589417 CDCA7Q9BWT1 371 aaPredicted RBP24.22■■□□□ 1.47
H3F3B-207ENST00000589417 KIF24Q5T7B8 1368 aa24.21■■□□□ 1.47
H3F3B-207ENST00000589417 FBLN1P23142 703 aa24.21■■□□□ 1.47
H3F3B-207ENST00000589417 RTL1A6NKG5 1358 aa24.2■■□□□ 1.46
H3F3B-207ENST00000589417 CCDC7Q96M83 1385 aa24.2■■□□□ 1.46
H3F3B-207ENST00000589417 BRWD3Q6RI45 1802 aa24.2■■□□□ 1.46
H3F3B-207ENST00000589417 CSB-PGBD3P0DP91 1061 aa24.2■■□□□ 1.46
H3F3B-207ENST00000589417 HOXC9P31274 260 aa24.2■■□□□ 1.46
H3F3B-207ENST00000589417 ANKRD24Q8TF21 1146 aa24.19■■□□□ 1.46
H3F3B-207ENST00000589417 AMPHP49418 695 aa24.18■■□□□ 1.46
H3F3B-207ENST00000589417 DISP2A7MBM2 1401 aa24.17■■□□□ 1.46
H3F3B-207ENST00000589417 NSD2O96028 1365 aa24.16■■□□□ 1.46
H3F3B-207ENST00000589417 LTN1O94822 1766 aa24.16■■□□□ 1.46
H3F3B-207ENST00000589417 RRS1Q15050 365 aaKnown RBP24.16■■□□□ 1.46
H3F3B-207ENST00000589417 KIF20BQ96Q89 1820 aa24.15■■□□□ 1.46
H3F3B-207ENST00000589417 PDE3BQ13370 1112 aa24.15■■□□□ 1.46
H3F3B-207ENST00000589417 WASHC2AQ641Q2 1341 aa24.14■■□□□ 1.46
H3F3B-207ENST00000589417 RGPD5Q99666 1765 aa24.14■■□□□ 1.46
H3F3B-207ENST00000589417 FAM196AQ6ZSG2 479 aa24.14■■□□□ 1.45
H3F3B-207ENST00000589417 PER1O15534 1290 aaPredicted RBP24.13■■□□□ 1.45
H3F3B-207ENST00000589417 NLRP2Q9NX02 1062 aa24.13■■□□□ 1.45
H3F3B-207ENST00000589417 INSRP06213 1382 aa24.13■■□□□ 1.45
H3F3B-207ENST00000589417 PARP4Q9UKK3 1724 aaKnown RBP24.13■■□□□ 1.45
H3F3B-207ENST00000589417 KNSTRNQ9Y448 316 aa24.12■■□□□ 1.45
H3F3B-207ENST00000589417 DDB1Q16531 1140 aa24.11■■□□□ 1.45
H3F3B-207ENST00000589417 FLT4P35916 1363 aa24.11■■□□□ 1.45
H3F3B-207ENST00000589417 AMER1Q5JTC6 1135 aaPredicted RBP24.1■■□□□ 1.45
H3F3B-207ENST00000589417 HSP90AB2PQ58FF8 381 aa24.09■■□□□ 1.45
H3F3B-207ENST00000589417 FAM182BQ5T319 152 aa24.09■■□□□ 1.45
H3F3B-207ENST00000589417 POLKQ9UBT6 870 aa24.09■■□□□ 1.45
H3F3B-207ENST00000589417 EMILIN1Q9Y6C2 1016 aa24.08■■□□□ 1.45
H3F3B-207ENST00000589417 BCL9O00512 1426 aa24.08■■□□□ 1.44
H3F3B-207ENST00000589417 EXOC5O00471 708 aa24.07■■□□□ 1.44
H3F3B-207ENST00000589417 IL2RBP14784 551 aa24.07■■□□□ 1.44
H3F3B-207ENST00000589417 LTV1Q96GA3 475 aaPredicted RBP24.06■■□□□ 1.44
H3F3B-207ENST00000589417 SF3B2Q13435 895 aaKnown RBP24.05■■□□□ 1.44
H3F3B-207ENST00000589417 LRRC37A3O60309 1634 aa24.04■■□□□ 1.44
H3F3B-207ENST00000589417 NBPF6Q5VWK0 638 aa24.04■■□□□ 1.44
H3F3B-207ENST00000589417 MARCH10Q8NA82 808 aaPredicted RBP24.04■■□□□ 1.44
H3F3B-207ENST00000589417 NBPF4Q96M43 638 aa24.04■■□□□ 1.44
H3F3B-207ENST00000589417 FAM208AQ9UK61 1670 aaKnown RBP24.04■■□□□ 1.44
H3F3B-207ENST00000589417 PEAK1Q9H792 1746 aa24.04■■□□□ 1.44
H3F3B-207ENST00000589417 NPC1L1Q9UHC9 1359 aa24.03■■□□□ 1.44
H3F3B-207ENST00000589417 SMG6Q86US8 1419 aaKnown RBP24.03■■□□□ 1.44
H3F3B-207ENST00000589417 MORC1Q86VD1 984 aa24.03■■□□□ 1.44
H3F3B-207ENST00000589417 ANKRD26Q9UPS8 1709 aa24.03■■□□□ 1.44
H3F3B-207ENST00000589417 OVOS2A0A0G2JMS6 1433 aa24.02■■□□□ 1.44
H3F3B-207ENST00000589417 TNS2Q63HR2 1409 aa24.02■■□□□ 1.44
H3F3B-207ENST00000589417 WNK3Q9BYP7 1800 aa24.02■■□□□ 1.44
H3F3B-207ENST00000589417 TRIM37O94972 964 aa23.99■■□□□ 1.43
H3F3B-207ENST00000589417 BAG6P46379 1132 aa23.99■■□□□ 1.43
H3F3B-207ENST00000589417 DEFB132Q7Z7B7 95 aa23.99■■□□□ 1.43
H3F3B-207ENST00000589417 TNNT2P45379 298 aaPredicted RBP23.98■■□□□ 1.43
H3F3B-207ENST00000589417 NCAPD2Q15021 1401 aa23.98■■□□□ 1.43
H3F3B-207ENST00000589417 PPM1GO15355 546 aaPredicted RBP23.97■■□□□ 1.43
H3F3B-207ENST00000589417 RGPD1P0DJD0 1748 aa23.95■■□□□ 1.42
H3F3B-207ENST00000589417 MAP2P11137 1827 aaKnown RBP23.94■■□□□ 1.42
H3F3B-207ENST00000589417 ZEB1P37275 1124 aaPredicted RBP23.94■■□□□ 1.42
H3F3B-207ENST00000589417 BCL11BQ9C0K0 894 aaPredicted RBP23.94■■□□□ 1.42
H3F3B-207ENST00000589417 EYA1Q99502 592 aa23.93■■□□□ 1.42
H3F3B-207ENST00000589417 PARD3Q8TEW0 1356 aa23.92■■□□□ 1.42
H3F3B-207ENST00000589417 EIF4A2Q14240 407 aaKnown RBP23.92■■□□□ 1.42
H3F3B-207ENST00000589417 ZCRB1Q8TBF4 217 aaKnown RBP23.92■■□□□ 1.42
H3F3B-207ENST00000589417 RAPGEF4Q8WZA2 1011 aa23.92■■□□□ 1.42
H3F3B-207ENST00000589417 CAMKK2Q96RR4 588 aa23.92■■□□□ 1.42
H3F3B-207ENST00000589417 MEGF6O75095 1541 aa23.92■■□□□ 1.42
H3F3B-207ENST00000589417 APBA3O96018 575 aa23.91■■□□□ 1.42
H3F3B-207ENST00000589417 EN1Q05925 392 aaPredicted RBP23.91■■□□□ 1.42
H3F3B-207ENST00000589417 USHBP1Q8N6Y0 703 aa23.91■■□□□ 1.42
H3F3B-207ENST00000589417 TNS1Q9HBL0 1735 aaKnown RBP23.9■■□□□ 1.42
H3F3B-207ENST00000589417 PLEKHG2Q9H7P9 1386 aa23.9■■□□□ 1.42
H3F3B-207ENST00000589417 PLSCR1O15162 318 aa23.89■■□□□ 1.41
H3F3B-207ENST00000589417 TATP17735 454 aaPredicted RBP23.89■■□□□ 1.41
H3F3B-207ENST00000589417 CC2D1BQ5T0F9 858 aaKnown RBP23.89■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms