RNA–Protein interactions for RNA: ENST00000589343.1

PPP6R1-205, Transcript of protein phosphatase 6 regulatory subunit 1, humanhuman

TSL 2

Gene PPP6R1, Length 904 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP6R1-205ENST00000589343 CHRNA2Q15822 529 aa17.94■□□□□ 0.46
PPP6R1-205ENST00000589343 BLMP54132 1417 aaPredicted RBP17.94■□□□□ 0.46
PPP6R1-205ENST00000589343 CDK12Q9NYV4 1490 aaPredicted RBP17.94■□□□□ 0.46
PPP6R1-205ENST00000589343 HSP90AB2PQ58FF8 381 aa17.93■□□□□ 0.46
PPP6R1-205ENST00000589343 MEX3CQ5U5Q3 659 aaKnown RBP17.93■□□□□ 0.46
PPP6R1-205ENST00000589343 DIAPH1O60610 1272 aaKnown RBP17.92■□□□□ 0.46
PPP6R1-205ENST00000589343 NUDCQ9Y266 331 aa17.92■□□□□ 0.46
PPP6R1-205ENST00000589343 NGLY1Q96IV0 654 aa17.91■□□□□ 0.46
PPP6R1-205ENST00000589343 MRS2Q9HD23 443 aa17.91■□□□□ 0.46
PPP6R1-205ENST00000589343 AXIN2Q9Y2T1 843 aa17.91■□□□□ 0.46
PPP6R1-205ENST00000589343 LTN1O94822 1766 aa17.9■□□□□ 0.46
PPP6R1-205ENST00000589343 EVA1CP58658 441 aa17.9■□□□□ 0.46
PPP6R1-205ENST00000589343 ILDR1Q86SU0 546 aaPredicted RBP17.9■□□□□ 0.46
PPP6R1-205ENST00000589343 C8orf37Q96NL8 207 aa17.9■□□□□ 0.46
PPP6R1-205ENST00000589343 COL14A1Q05707 1796 aaKnown RBP17.89■□□□□ 0.45
PPP6R1-205ENST00000589343 FNBP4Q8N3X1 1017 aaPredicted RBP17.89■□□□□ 0.45
PPP6R1-205ENST00000589343 BTG4Q9NY30 223 aa17.89■□□□□ 0.45
PPP6R1-205ENST00000589343 LRP6O75581 1613 aa17.88■□□□□ 0.45
PPP6R1-205ENST00000589343 IL13P35225 146 aa17.88■□□□□ 0.45
PPP6R1-205ENST00000589343 EIF4A2Q14240 407 aaKnown RBP17.88■□□□□ 0.45
PPP6R1-205ENST00000589343 ANKRD24Q8TF21 1146 aa17.88■□□□□ 0.45
PPP6R1-205ENST00000589343 COL18A1P39060 1754 aa17.87■□□□□ 0.45
PPP6R1-205ENST00000589343 CSB-PGBD3P0DP91 1061 aa17.87■□□□□ 0.45
PPP6R1-205ENST00000589343 LTV1Q96GA3 475 aaPredicted RBP17.87■□□□□ 0.45
PPP6R1-205ENST00000589343 ERBB3P21860 1342 aa17.87■□□□□ 0.45
PPP6R1-205ENST00000589343 PEAK1Q9H792 1746 aa17.86■□□□□ 0.45
PPP6R1-205ENST00000589343 UNC5CLQ8IV45 518 aa17.86■□□□□ 0.45
PPP6R1-205ENST00000589343 SLIT2O94813 1529 aa17.86■□□□□ 0.45
PPP6R1-205ENST00000589343 CAMTA1Q9Y6Y1 1673 aa17.86■□□□□ 0.45
PPP6R1-205ENST00000589343 WDR17Q8IZU2 1322 aa17.85■□□□□ 0.45
PPP6R1-205ENST00000589343 LMO7Q8WWI1 1683 aa17.85■□□□□ 0.45
PPP6R1-205ENST00000589343 COL3A1P02461 1466 aaPredicted RBP17.84■□□□□ 0.45
PPP6R1-205ENST00000589343 COL5A2P05997 1499 aaPredicted RBP17.84■□□□□ 0.45
PPP6R1-205ENST00000589343 WDR43Q15061 677 aaKnown RBP eCLIP17.84■□□□□ 0.45
PPP6R1-205ENST00000589343 CCDC184Q52MB2 194 aa17.84■□□□□ 0.45
PPP6R1-205ENST00000589343 PNISRQ8TF01 805 aaKnown RBP17.83■□□□□ 0.44
PPP6R1-205ENST00000589343 STRN4Q9NRL3 753 aa17.83■□□□□ 0.44
PPP6R1-205ENST00000589343 NLRP2Q9NX02 1062 aa17.83■□□□□ 0.44
PPP6R1-205ENST00000589343 USP21Q9UK80 565 aa17.83■□□□□ 0.44
PPP6R1-205ENST00000589343 AFF2P51816 1311 aa17.82■□□□□ 0.44
PPP6R1-205ENST00000589343 U2SURPO15042 1029 aaKnown RBP17.82■□□□□ 0.44
PPP6R1-205ENST00000589343 TOM1L2Q6ZVM7 507 aa17.82■□□□□ 0.44
PPP6R1-205ENST00000589343 EYA1Q99502 592 aa17.82■□□□□ 0.44
PPP6R1-205ENST00000589343 CARD10Q9BWT7 1032 aa17.82■□□□□ 0.44
PPP6R1-205ENST00000589343 PNNQ9H307 717 aaKnown RBP17.82■□□□□ 0.44
PPP6R1-205ENST00000589343 NWD2Q9ULI1 1742 aa17.81■□□□□ 0.44
PPP6R1-205ENST00000589343 U2AF1L5P0DN76 240 aaPredicted RBP17.81■□□□□ 0.44
PPP6R1-205ENST00000589343 U2AF1Q01081 240 aaKnown RBP eCLIP17.81■□□□□ 0.44
PPP6R1-205ENST00000589343 IGSF1Q8N6C5 1336 aa17.8■□□□□ 0.44
PPP6R1-205ENST00000589343 NBPF6Q5VWK0 638 aa17.8■□□□□ 0.44
PPP6R1-205ENST00000589343 ZNF772Q68DY9 489 aaPredicted RBP17.8■□□□□ 0.44
PPP6R1-205ENST00000589343 LARP1Q6PKG0 1096 aaKnown RBP17.8■□□□□ 0.44
PPP6R1-205ENST00000589343 NBPF4Q96M43 638 aa17.8■□□□□ 0.44
PPP6R1-205ENST00000589343 BCL9LQ86UU0 1499 aa17.8■□□□□ 0.44
PPP6R1-205ENST00000589343 RGPD5Q99666 1765 aa17.79■□□□□ 0.44
PPP6R1-205ENST00000589343 FCHSD2O94868 740 aa17.79■□□□□ 0.44
PPP6R1-205ENST00000589343 VPS72Q15906 364 aa17.79■□□□□ 0.44
PPP6R1-205ENST00000589343 CRB1P82279 1406 aa17.79■□□□□ 0.44
PPP6R1-205ENST00000589343 PLCH1Q4KWH8 1693 aa17.78■□□□□ 0.44
PPP6R1-205ENST00000589343 TRPC5Q9UL62 973 aaPredicted RBP17.78■□□□□ 0.44
PPP6R1-205ENST00000589343 THRAP3Q9Y2W1 955 aaKnown RBP17.78■□□□□ 0.44
PPP6R1-205ENST00000589343 SULT6B1Q6IMI4 303 aa17.77■□□□□ 0.44
PPP6R1-205ENST00000589343 ADAMTS8Q9UP79 889 aa17.77■□□□□ 0.44
PPP6R1-205ENST00000589343 FAM208AQ9UK61 1670 aaKnown RBP17.77■□□□□ 0.43
PPP6R1-205ENST00000589343 SPATA31A5Q5VU36 1347 aa17.76■□□□□ 0.43
PPP6R1-205ENST00000589343 SPATA31A7Q8IWB4 1347 aa17.76■□□□□ 0.43
PPP6R1-205ENST00000589343 TCP11L2Q8N4U5 519 aa17.76■□□□□ 0.43
PPP6R1-205ENST00000589343 CCDC9Q9Y3X0 531 aaKnown RBP17.76■□□□□ 0.43
PPP6R1-205ENST00000589343 KDRP35968 1356 aa17.76■□□□□ 0.43
PPP6R1-205ENST00000589343 NCAPD2Q15021 1401 aa17.75■□□□□ 0.43
PPP6R1-205ENST00000589343 NEFMP07197 916 aa17.75■□□□□ 0.43
PPP6R1-205ENST00000589343 FAM9BQ8IZU0 186 aa17.75■□□□□ 0.43
PPP6R1-205ENST00000589343 CDCA7Q9BWT1 371 aaPredicted RBP17.75■□□□□ 0.43
PPP6R1-205ENST00000589343 NRAPQ86VF7 1730 aa17.75■□□□□ 0.43
PPP6R1-205ENST00000589343 SPATA31A1Q5TZJ5 1347 aa17.74■□□□□ 0.43
PPP6R1-205ENST00000589343 HMOX1P09601 288 aa17.74■□□□□ 0.43
PPP6R1-205ENST00000589343 RAPGEF4Q8WZA2 1011 aa17.74■□□□□ 0.43
PPP6R1-205ENST00000589343 RSPH6AQ9H0K4 717 aa17.74■□□□□ 0.43
PPP6R1-205ENST00000589343 QTRT2Q9H974 415 aaKnown RBP17.74■□□□□ 0.43
PPP6R1-205ENST00000589343 PLEKHG2Q9H7P9 1386 aa17.74■□□□□ 0.43
PPP6R1-205ENST00000589343 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.73■□□□□ 0.43
PPP6R1-205ENST00000589343 BARGINQ6ZT62 677 aa17.73■□□□□ 0.43
PPP6R1-205ENST00000589343 USHBP1Q8N6Y0 703 aa17.73■□□□□ 0.43
PPP6R1-205ENST00000589343 GJD4Q96KN9 370 aaPredicted RBP17.73■□□□□ 0.43
PPP6R1-205ENST00000589343 PHF23Q9BUL5 403 aaPredicted RBP17.73■□□□□ 0.43
PPP6R1-205ENST00000589343 ATRNO75882 1429 aa17.72■□□□□ 0.43
PPP6R1-205ENST00000589343 AEBP1Q8IUX7 1158 aa17.72■□□□□ 0.43
PPP6R1-205ENST00000589343 USP35Q9P2H5 1018 aa17.72■□□□□ 0.43
PPP6R1-205ENST00000589343 RGPD1P0DJD0 1748 aa17.72■□□□□ 0.43
PPP6R1-205ENST00000589343 IL2RBP14784 551 aa17.71■□□□□ 0.43
PPP6R1-205ENST00000589343 TATP17735 454 aaPredicted RBP17.71■□□□□ 0.43
PPP6R1-205ENST00000589343 PRKAR2BP31323 418 aa17.71■□□□□ 0.43
PPP6R1-205ENST00000589343 AMOTQ4VCS5 1084 aa17.7■□□□□ 0.42
PPP6R1-205ENST00000589343 RUNDC1Q96C34 613 aa17.7■□□□□ 0.42
PPP6R1-205ENST00000589343 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.7■□□□□ 0.42
PPP6R1-205ENST00000589343 MAPK8IP3Q9UPT6 1336 aa17.7■□□□□ 0.42
PPP6R1-205ENST00000589343 PLEKHO1Q53GL0 409 aaPredicted RBP17.69■□□□□ 0.42
PPP6R1-205ENST00000589343 PLEKHF1Q96S99 279 aa17.69■□□□□ 0.42
PPP6R1-205ENST00000589343 RBM6P78332 1123 aaKnown RBP17.68■□□□□ 0.42
PPP6R1-205ENST00000589343 RGPD2P0DJD1 1756 aa17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms