RNA–Protein interactions for RNA: ENST00000589253.1

TOMM40-204, Transcript of translocase of outer mitochondrial membrane 40, humanhuman

TSL 3

Gene TOMM40, Length 207 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOMM40-204ENST00000589253 TOM1L2Q6ZVM7 507 aa16.47■□□□□ 0.23
TOMM40-204ENST00000589253 USP47Q96K76 1375 aa16.47■□□□□ 0.23
TOMM40-204ENST00000589253 LRRC37A3O60309 1634 aa16.46■□□□□ 0.23
TOMM40-204ENST00000589253 BCL11BQ9C0K0 894 aaPredicted RBP16.46■□□□□ 0.23
TOMM40-204ENST00000589253 NLRP6P59044 892 aa16.45■□□□□ 0.22
TOMM40-204ENST00000589253 AATKQ6ZMQ8 1374 aa16.45■□□□□ 0.22
TOMM40-204ENST00000589253 PEAK1Q9H792 1746 aa16.45■□□□□ 0.22
TOMM40-204ENST00000589253 CDCA7Q9BWT1 371 aaPredicted RBP16.44■□□□□ 0.22
TOMM40-204ENST00000589253 SBNO2Q9Y2G9 1366 aa16.43■□□□□ 0.22
TOMM40-204ENST00000589253 CABP2Q9NPB3 220 aa16.43■□□□□ 0.22
TOMM40-204ENST00000589253 SBF2Q86WG5 1849 aa16.42■□□□□ 0.22
TOMM40-204ENST00000589253 AKAP12Q02952 1782 aa16.42■□□□□ 0.22
TOMM40-204ENST00000589253 CASZ1Q86V15 1759 aa16.42■□□□□ 0.22
TOMM40-204ENST00000589253 USP6P35125 1406 aa16.42■□□□□ 0.22
TOMM40-204ENST00000589253 SLIT3O75094 1523 aa16.41■□□□□ 0.22
TOMM40-204ENST00000589253 ZBTB7AO95365 584 aa16.41■□□□□ 0.22
TOMM40-204ENST00000589253 CSB-PGBD3P0DP91 1061 aa16.41■□□□□ 0.22
TOMM40-204ENST00000589253 ANO8Q9HCE9 1232 aaPredicted RBP16.41■□□□□ 0.22
TOMM40-204ENST00000589253 STK32BQ9NY57 414 aa16.41■□□□□ 0.22
TOMM40-204ENST00000589253 WDR17Q8IZU2 1322 aa16.41■□□□□ 0.22
TOMM40-204ENST00000589253 WNK3Q9BYP7 1800 aa16.4■□□□□ 0.22
TOMM40-204ENST00000589253 ST20-MTHFSA0A0A6YYL1 179 aa16.4■□□□□ 0.22
TOMM40-204ENST00000589253 TESK2Q96S53 571 aa16.4■□□□□ 0.22
TOMM40-204ENST00000589253 CABP1Q9NZU7 370 aa16.39■□□□□ 0.21
TOMM40-204ENST00000589253 BCL9O00512 1426 aa16.38■□□□□ 0.21
TOMM40-204ENST00000589253 CPSF1Q10570 1443 aaKnown RBP16.38■□□□□ 0.21
TOMM40-204ENST00000589253 MYOM1P52179 1685 aa16.38■□□□□ 0.21
TOMM40-204ENST00000589253 KCNH5Q8NCM2 988 aa16.38■□□□□ 0.21
TOMM40-204ENST00000589253 MARCH10Q8NA82 808 aaPredicted RBP16.37■□□□□ 0.21
TOMM40-204ENST00000589253 ATF5Q9Y2D1 282 aaPredicted RBP16.37■□□□□ 0.21
TOMM40-204ENST00000589253 PIK3C2AO00443 1686 aa16.37■□□□□ 0.21
TOMM40-204ENST00000589253 EXOC5O00471 708 aa16.36■□□□□ 0.21
TOMM40-204ENST00000589253 TXNRD1Q16881 649 aa16.36■□□□□ 0.21
TOMM40-204ENST00000589253 EVC2Q86UK5 1308 aa16.36■□□□□ 0.21
TOMM40-204ENST00000589253 SOX12O15370 315 aa16.35■□□□□ 0.21
TOMM40-204ENST00000589253 HSPA5P11021 654 aaKnown RBP16.35■□□□□ 0.21
TOMM40-204ENST00000589253 SLC15A2Q16348 729 aa16.35■□□□□ 0.21
TOMM40-204ENST00000589253 CARD10Q9BWT7 1032 aa16.35■□□□□ 0.21
TOMM40-204ENST00000589253 PDGFDQ9GZP0 370 aaPredicted RBP16.35■□□□□ 0.21
TOMM40-204ENST00000589253 COL18A1P39060 1754 aa16.34■□□□□ 0.21
TOMM40-204ENST00000589253 PTGER2P43116 358 aa16.34■□□□□ 0.21
TOMM40-204ENST00000589253 PTF1AQ7RTS3 328 aa16.34■□□□□ 0.21
TOMM40-204ENST00000589253 ZNF784Q8NCA9 323 aaPredicted RBP16.34■□□□□ 0.21
TOMM40-204ENST00000589253 MTFR1LQ9H019 292 aa16.34■□□□□ 0.21
TOMM40-204ENST00000589253 AXIN2Q9Y2T1 843 aa16.34■□□□□ 0.21
TOMM40-204ENST00000589253 ARHGEF25Q86VW2 580 aa16.33■□□□□ 0.2
TOMM40-204ENST00000589253 PROM2Q8N271 834 aa16.33■□□□□ 0.2
TOMM40-204ENST00000589253 ZNF692Q9BU19 519 aaPredicted RBP16.33■□□□□ 0.2
TOMM40-204ENST00000589253 FHDC1Q9C0D6 1143 aaPredicted RBP16.33■□□□□ 0.2
TOMM40-204ENST00000589253 CCDC7Q96M83 1385 aa16.33■□□□□ 0.2
TOMM40-204ENST00000589253 MON2Q7Z3U7 1717 aa16.33■□□□□ 0.2
TOMM40-204ENST00000589253 TTC21AQ8NDW8 1320 aa16.32■□□□□ 0.2
TOMM40-204ENST00000589253 SYT17Q9BSW7 474 aa16.32■□□□□ 0.2
TOMM40-204ENST00000589253 TNS2Q63HR2 1409 aa16.31■□□□□ 0.2
TOMM40-204ENST00000589253 EIF4G2P78344 907 aaKnown RBP eCLIP16.31■□□□□ 0.2
TOMM40-204ENST00000589253 TTC21BQ7Z4L5 1316 aa16.3■□□□□ 0.2
TOMM40-204ENST00000589253 RGPD5Q99666 1765 aa16.3■□□□□ 0.2
TOMM40-204ENST00000589253 ABCC6O95255 1503 aa16.29■□□□□ 0.2
TOMM40-204ENST00000589253 SENP3-EIF4A1A0A087X0R7 540 aa16.29■□□□□ 0.2
TOMM40-204ENST00000589253 NHSQ6T4R5 1651 aa16.29■□□□□ 0.2
TOMM40-204ENST00000589253 ARXQ96QS3 562 aa16.28■□□□□ 0.2
TOMM40-204ENST00000589253 CD163L1Q9NR16 1453 aa16.28■□□□□ 0.2
TOMM40-204ENST00000589253 ACSBG1Q96GR2 724 aa16.27■□□□□ 0.2
TOMM40-204ENST00000589253 CHD4Q14839 1912 aa16.27■□□□□ 0.19
TOMM40-204ENST00000589253 KTN1Q86UP2 1357 aaKnown RBP16.26■□□□□ 0.19
TOMM40-204ENST00000589253 NFAT5O94916 1531 aa16.26■□□□□ 0.19
TOMM40-204ENST00000589253 TMF1P82094 1093 aa16.25■□□□□ 0.19
TOMM40-204ENST00000589253 NLRP2Q9NX02 1062 aa16.25■□□□□ 0.19
TOMM40-204ENST00000589253 IL2RBP14784 551 aa16.24■□□□□ 0.19
TOMM40-204ENST00000589253 ZEB1P37275 1124 aaPredicted RBP16.24■□□□□ 0.19
TOMM40-204ENST00000589253 C1QTNF8P60827 252 aa16.24■□□□□ 0.19
TOMM40-204ENST00000589253 GPR162Q16538 588 aa16.24■□□□□ 0.19
TOMM40-204ENST00000589253 PUS7Q96PZ0 661 aaKnown RBP16.24■□□□□ 0.19
TOMM40-204ENST00000589253 SGIP1Q9BQI5 828 aa16.24■□□□□ 0.19
TOMM40-204ENST00000589253 MAP3K5Q99683 1374 aa16.24■□□□□ 0.19
TOMM40-204ENST00000589253 UTRNP46939 3433 aa16.23■□□□□ 0.19
TOMM40-204ENST00000589253 KLHL34Q8N239 644 aa16.23■□□□□ 0.19
TOMM40-204ENST00000589253 ERBB3P21860 1342 aa16.22■□□□□ 0.19
TOMM40-204ENST00000589253 POLD1P28340 1107 aa16.22■□□□□ 0.19
TOMM40-204ENST00000589253 PAPPAQ13219 1627 aa16.22■□□□□ 0.19
TOMM40-204ENST00000589253 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.21■□□□□ 0.19
TOMM40-204ENST00000589253 BTAF1O14981 1849 aa16.21■□□□□ 0.19
TOMM40-204ENST00000589253 SLC24A1O60721 1099 aa16.2■□□□□ 0.18
TOMM40-204ENST00000589253 PELP1Q8IZL8 1130 aaKnown RBP16.2■□□□□ 0.18
TOMM40-204ENST00000589253 SLC12A5Q9H2X9 1139 aa16.2■□□□□ 0.18
TOMM40-204ENST00000589253 USP54Q70EL1 1684 aa16.2■□□□□ 0.18
TOMM40-204ENST00000589253 KIF20BQ96Q89 1820 aa16.19■□□□□ 0.18
TOMM40-204ENST00000589253 LTN1O94822 1766 aa16.19■□□□□ 0.18
TOMM40-204ENST00000589253 A0A1W2PP64 1363 aa16.19■□□□□ 0.18
TOMM40-204ENST00000589253 GIGYF1O75420 1035 aaPredicted RBP16.19■□□□□ 0.18
TOMM40-204ENST00000589253 ANKRD24Q8TF21 1146 aa16.19■□□□□ 0.18
TOMM40-204ENST00000589253 SLC16A10Q8TF71 515 aa16.19■□□□□ 0.18
TOMM40-204ENST00000589253 ZNF827Q17R98 1081 aa16.18■□□□□ 0.18
TOMM40-204ENST00000589253 SLC27A3Q5K4L6 730 aa16.18■□□□□ 0.18
TOMM40-204ENST00000589253 KIF7Q2M1P5 1343 aa16.18■□□□□ 0.18
TOMM40-204ENST00000589253 USP31Q70CQ4 1352 aa16.17■□□□□ 0.18
TOMM40-204ENST00000589253 HDGFL2Q7Z4V5 671 aaPredicted RBP16.17■□□□□ 0.18
TOMM40-204ENST00000589253 TMC1Q8TDI8 760 aa16.16■□□□□ 0.18
TOMM40-204ENST00000589253 TFCP2L1Q9NZI6 479 aa16.16■□□□□ 0.18
TOMM40-204ENST00000589253 ANKRD36BQ8N2N9 1353 aa16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms