RNA–Protein interactions for RNA: ENST00000589050.1

RPRD1A-208, Transcript of regulation of nuclear pre-mRNA domain containing 1A, humanhuman

TSL 1 (best)

Gene RPRD1A, Length 1,022 nt, Biotype non stop decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1A-208ENST00000589050 PRKRIP1Q9H875 184 aaPredicted RBP20.93■□□□□ 0.94
RPRD1A-208ENST00000589050 AXIN2Q9Y2T1 843 aa20.93■□□□□ 0.94
RPRD1A-208ENST00000589050 FLT4P35916 1363 aa20.93■□□□□ 0.94
RPRD1A-208ENST00000589050 KIF24Q5T7B8 1368 aa20.93■□□□□ 0.94
RPRD1A-208ENST00000589050 SMG6Q86US8 1419 aaKnown RBP20.93■□□□□ 0.94
RPRD1A-208ENST00000589050 LMO7Q8WWI1 1683 aa20.93■□□□□ 0.94
RPRD1A-208ENST00000589050 ANP32CO43423 234 aa20.92■□□□□ 0.94
RPRD1A-208ENST00000589050 MTHFSP49914 203 aa20.92■□□□□ 0.94
RPRD1A-208ENST00000589050 PLCH1Q4KWH8 1693 aa20.92■□□□□ 0.94
RPRD1A-208ENST00000589050 CAMTA1Q9Y6Y1 1673 aa20.92■□□□□ 0.94
RPRD1A-208ENST00000589050 PEAK1Q9H792 1746 aa20.91■□□□□ 0.94
RPRD1A-208ENST00000589050 USP21Q9UK80 565 aa20.91■□□□□ 0.94
RPRD1A-208ENST00000589050 COL18A1P39060 1754 aa20.9■□□□□ 0.94
RPRD1A-208ENST00000589050 BLMP54132 1417 aaPredicted RBP20.9■□□□□ 0.94
RPRD1A-208ENST00000589050 BCL9LQ86UU0 1499 aa20.89■□□□□ 0.94
RPRD1A-208ENST00000589050 EVA1CP58658 441 aa20.89■□□□□ 0.93
RPRD1A-208ENST00000589050 HSP90AB2PQ58FF8 381 aa20.89■□□□□ 0.93
RPRD1A-208ENST00000589050 DIEXFQ68CQ4 756 aaKnown RBP20.89■□□□□ 0.93
RPRD1A-208ENST00000589050 UNC5CLQ8IV45 518 aa20.89■□□□□ 0.93
RPRD1A-208ENST00000589050 STRN4Q9NRL3 753 aa20.89■□□□□ 0.93
RPRD1A-208ENST00000589050 COL5A2P05997 1499 aaPredicted RBP20.88■□□□□ 0.93
RPRD1A-208ENST00000589050 CDK12Q9NYV4 1490 aaPredicted RBP20.88■□□□□ 0.93
RPRD1A-208ENST00000589050 INSRP06213 1382 aa20.88■□□□□ 0.93
RPRD1A-208ENST00000589050 MYBBP1AQ9BQG0 1328 aaKnown RBP20.88■□□□□ 0.93
RPRD1A-208ENST00000589050 ANKRD24Q8TF21 1146 aa20.88■□□□□ 0.93
RPRD1A-208ENST00000589050 LTV1Q96GA3 475 aaPredicted RBP20.88■□□□□ 0.93
RPRD1A-208ENST00000589050 NWD2Q9ULI1 1742 aa20.87■□□□□ 0.93
RPRD1A-208ENST00000589050 MAP2P11137 1827 aaKnown RBP20.87■□□□□ 0.93
RPRD1A-208ENST00000589050 CSB-PGBD3P0DP91 1061 aa20.86■□□□□ 0.93
RPRD1A-208ENST00000589050 ZNF772Q68DY9 489 aaPredicted RBP20.86■□□□□ 0.93
RPRD1A-208ENST00000589050 ERBB3P21860 1342 aa20.85■□□□□ 0.93
RPRD1A-208ENST00000589050 NRAPQ86VF7 1730 aa20.85■□□□□ 0.93
RPRD1A-208ENST00000589050 LARP1Q6PKG0 1096 aaKnown RBP20.84■□□□□ 0.93
RPRD1A-208ENST00000589050 CFAP53Q96M91 514 aa20.84■□□□□ 0.93
RPRD1A-208ENST00000589050 WDR17Q8IZU2 1322 aa20.83■□□□□ 0.93
RPRD1A-208ENST00000589050 CCDC9Q9Y3X0 531 aaKnown RBP20.83■□□□□ 0.93
RPRD1A-208ENST00000589050 EIF4A2Q14240 407 aaKnown RBP20.82■□□□□ 0.92
RPRD1A-208ENST00000589050 VPS72Q15906 364 aa20.82■□□□□ 0.92
RPRD1A-208ENST00000589050 TOM1L2Q6ZVM7 507 aa20.82■□□□□ 0.92
RPRD1A-208ENST00000589050 QTRT2Q9H974 415 aaKnown RBP20.82■□□□□ 0.92
RPRD1A-208ENST00000589050 RGS17Q9UGC6 210 aaPredicted RBP20.82■□□□□ 0.92
RPRD1A-208ENST00000589050 TRPC5Q9UL62 973 aaPredicted RBP20.82■□□□□ 0.92
RPRD1A-208ENST00000589050 RGPD5Q99666 1765 aa20.82■□□□□ 0.92
RPRD1A-208ENST00000589050 TNKS1BP1Q9C0C2 1729 aaKnown RBP20.81■□□□□ 0.92
RPRD1A-208ENST00000589050 ATRNO75882 1429 aa20.81■□□□□ 0.92
RPRD1A-208ENST00000589050 NLRP2Q9NX02 1062 aa20.81■□□□□ 0.92
RPRD1A-208ENST00000589050 CRB1P82279 1406 aa20.8■□□□□ 0.92
RPRD1A-208ENST00000589050 DIAPH1O60610 1272 aaKnown RBP20.79■□□□□ 0.92
RPRD1A-208ENST00000589050 COL3A1P02461 1466 aaPredicted RBP20.79■□□□□ 0.92
RPRD1A-208ENST00000589050 IL13P35225 146 aa20.78■□□□□ 0.92
RPRD1A-208ENST00000589050 USP35Q9P2H5 1018 aa20.78■□□□□ 0.92
RPRD1A-208ENST00000589050 SPATA31A5Q5VU36 1347 aa20.78■□□□□ 0.92
RPRD1A-208ENST00000589050 SPATA31A7Q8IWB4 1347 aa20.78■□□□□ 0.92
RPRD1A-208ENST00000589050 NBPF6Q5VWK0 638 aa20.77■□□□□ 0.92
RPRD1A-208ENST00000589050 NBPF4Q96M43 638 aa20.77■□□□□ 0.92
RPRD1A-208ENST00000589050 CARD10Q9BWT7 1032 aa20.77■□□□□ 0.92
RPRD1A-208ENST00000589050 SPATA31A1Q5TZJ5 1347 aa20.77■□□□□ 0.91
RPRD1A-208ENST00000589050 GJD4Q96KN9 370 aaPredicted RBP20.76■□□□□ 0.91
RPRD1A-208ENST00000589050 FAM208AQ9UK61 1670 aaKnown RBP20.75■□□□□ 0.91
RPRD1A-208ENST00000589050 POTEAQ6S8J7 498 aa20.75■□□□□ 0.91
RPRD1A-208ENST00000589050 EYA1Q99502 592 aa20.75■□□□□ 0.91
RPRD1A-208ENST00000589050 TCP11L2Q8N4U5 519 aa20.74■□□□□ 0.91
RPRD1A-208ENST00000589050 USHBP1Q8N6Y0 703 aa20.74■□□□□ 0.91
RPRD1A-208ENST00000589050 NUDCQ9Y266 331 aa20.73■□□□□ 0.91
RPRD1A-208ENST00000589050 U2SURPO15042 1029 aaKnown RBP20.72■□□□□ 0.91
RPRD1A-208ENST00000589050 RBM6P78332 1123 aaKnown RBP20.72■□□□□ 0.91
RPRD1A-208ENST00000589050 THRAP3Q9Y2W1 955 aaKnown RBP20.72■□□□□ 0.91
RPRD1A-208ENST00000589050 IGSF1Q8N6C5 1336 aa20.72■□□□□ 0.91
RPRD1A-208ENST00000589050 GLI3P10071 1580 aa20.72■□□□□ 0.91
RPRD1A-208ENST00000589050 RXRBP28702 533 aa20.71■□□□□ 0.91
RPRD1A-208ENST00000589050 FAM98CQ17RN3 349 aaKnown RBP20.7■□□□□ 0.9
RPRD1A-208ENST00000589050 CCDC184Q52MB2 194 aa20.7■□□□□ 0.9
RPRD1A-208ENST00000589050 BARGINQ6ZT62 677 aa20.69■□□□□ 0.9
RPRD1A-208ENST00000589050 MIER1Q8N108 512 aa20.69■□□□□ 0.9
RPRD1A-208ENST00000589050 MRS2Q9HD23 443 aa20.69■□□□□ 0.9
RPRD1A-208ENST00000589050 RGPD2P0DJD1 1756 aa20.69■□□□□ 0.9
RPRD1A-208ENST00000589050 NCAPD2Q15021 1401 aa20.69■□□□□ 0.9
RPRD1A-208ENST00000589050 RGPD1P0DJD0 1748 aa20.68■□□□□ 0.9
RPRD1A-208ENST00000589050 SULT6B1Q6IMI4 303 aa20.68■□□□□ 0.9
RPRD1A-208ENST00000589050 A0A0G2JS52 829 aa20.67■□□□□ 0.9
RPRD1A-208ENST00000589050 HMOX1P09601 288 aa20.67■□□□□ 0.9
RPRD1A-208ENST00000589050 U2AF1L5P0DN76 240 aaPredicted RBP20.67■□□□□ 0.9
RPRD1A-208ENST00000589050 IL2RBP14784 551 aa20.67■□□□□ 0.9
RPRD1A-208ENST00000589050 U2AF1Q01081 240 aaKnown RBP eCLIP20.67■□□□□ 0.91e-6■■■□□ 15.4
RPRD1A-208ENST00000589050 MYT1Q01538 1121 aa20.67■□□□□ 0.9
RPRD1A-208ENST00000589050 AEBP1Q8IUX7 1158 aa20.67■□□□□ 0.9
RPRD1A-208ENST00000589050 RAPGEF4Q8WZA2 1011 aa20.66■□□□□ 0.9
RPRD1A-208ENST00000589050 DISP2A7MBM2 1401 aa20.65■□□□□ 0.9
RPRD1A-208ENST00000589050 WDR43Q15061 677 aaKnown RBP eCLIP20.65■□□□□ 0.9
RPRD1A-208ENST00000589050 CDCA7Q9BWT1 371 aaPredicted RBP20.65■□□□□ 0.9
RPRD1A-208ENST00000589050 KDRP35968 1356 aa20.64■□□□□ 0.89
RPRD1A-208ENST00000589050 ONECUT3O60422 494 aaPredicted RBP20.64■□□□□ 0.89
RPRD1A-208ENST00000589050 TATP17735 454 aaPredicted RBP20.64■□□□□ 0.89
RPRD1A-208ENST00000589050 MEGF6O75095 1541 aa20.63■□□□□ 0.89
RPRD1A-208ENST00000589050 CCER2I3L3R5 266 aa20.63■□□□□ 0.89
RPRD1A-208ENST00000589050 SEPT12Q8IYM1 358 aa20.63■□□□□ 0.89
RPRD1A-208ENST00000589050 THSD7AQ9UPZ6 1657 aa20.61■□□□□ 0.89
RPRD1A-208ENST00000589050 OVOS2A0A0G2JMS6 1433 aa20.61■□□□□ 0.89
RPRD1A-208ENST00000589050 RGS12O14924 1447 aa20.61■□□□□ 0.89
RPRD1A-208ENST00000589050 WNK3Q9BYP7 1800 aa20.6■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms