RNA–Protein interactions for RNA: ENST00000588917.2

CIRBP-220, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 1,087 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-220ENST00000588917 TNNT2P45379 298 aaPredicted RBP26.55■■□□□ 1.84
CIRBP-220ENST00000588917 EP400Q96L91 3159 aa26.55■■□□□ 1.84
CIRBP-220ENST00000588917 KIF24Q5T7B8 1368 aa26.55■■□□□ 1.84
CIRBP-220ENST00000588917 EVA1CP58658 441 aa26.54■■□□□ 1.84
CIRBP-220ENST00000588917 IP6K1Q92551 441 aa26.54■■□□□ 1.84
CIRBP-220ENST00000588917 MAP3K19Q56UN5 1328 aa26.54■■□□□ 1.84
CIRBP-220ENST00000588917 TNKS1BP1Q9C0C2 1729 aaKnown RBP26.53■■□□□ 1.84
CIRBP-220ENST00000588917 COL14A1Q05707 1796 aaKnown RBP26.53■■□□□ 1.84
CIRBP-220ENST00000588917 CNGB1Q14028 1251 aaPredicted RBP26.53■■□□□ 1.84
CIRBP-220ENST00000588917 VPS72Q15906 364 aa26.53■■□□□ 1.84
CIRBP-220ENST00000588917 ANKRD26Q9UPS8 1709 aa26.53■■□□□ 1.84
CIRBP-220ENST00000588917 FBLN1P23142 703 aa26.52■■□□□ 1.84
CIRBP-220ENST00000588917 RRS1Q15050 365 aaKnown RBP26.52■■□□□ 1.84
CIRBP-220ENST00000588917 POLKQ9UBT6 870 aa26.51■■□□□ 1.83
CIRBP-220ENST00000588917 SRCAPQ6ZRS2 3230 aa26.5■■□□□ 1.83
CIRBP-220ENST00000588917 RALBP1Q15311 655 aa26.5■■□□□ 1.83
CIRBP-220ENST00000588917 GLI3P10071 1580 aa26.5■■□□□ 1.83
CIRBP-220ENST00000588917 ABCC6O95255 1503 aa26.49■■□□□ 1.83
CIRBP-220ENST00000588917 RTL1A6NKG5 1358 aa26.49■■□□□ 1.83
CIRBP-220ENST00000588917 AXIN2Q9Y2T1 843 aa26.49■■□□□ 1.83
CIRBP-220ENST00000588917 PPM1GO15355 546 aaPredicted RBP26.48■■□□□ 1.83
CIRBP-220ENST00000588917 HOXC9P31274 260 aa26.48■■□□□ 1.83
CIRBP-220ENST00000588917 SEPT12Q8IYM1 358 aa26.48■■□□□ 1.83
CIRBP-220ENST00000588917 CCDC9Q9Y3X0 531 aaKnown RBP26.48■■□□□ 1.83
CIRBP-220ENST00000588917 ONECUT3O60422 494 aaPredicted RBP26.47■■□□□ 1.83
CIRBP-220ENST00000588917 BLMP54132 1417 aaPredicted RBP26.47■■□□□ 1.83
CIRBP-220ENST00000588917 FLT4P35916 1363 aa26.46■■□□□ 1.83
CIRBP-220ENST00000588917 EMILIN1Q9Y6C2 1016 aa26.46■■□□□ 1.83
CIRBP-220ENST00000588917 STRN4Q9NRL3 753 aa26.45■■□□□ 1.82
CIRBP-220ENST00000588917 NWD2Q9ULI1 1742 aa26.45■■□□□ 1.82
CIRBP-220ENST00000588917 CAMTA1Q9Y6Y1 1673 aa26.44■■□□□ 1.82
CIRBP-220ENST00000588917 INSRP06213 1382 aa26.43■■□□□ 1.82
CIRBP-220ENST00000588917 LMO7Q8WWI1 1683 aa26.42■■□□□ 1.82
CIRBP-220ENST00000588917 CSB-PGBD3P0DP91 1061 aa26.42■■□□□ 1.82
CIRBP-220ENST00000588917 MTHFSP49914 203 aa26.42■■□□□ 1.82
CIRBP-220ENST00000588917 LTN1O94822 1766 aa26.42■■□□□ 1.82
CIRBP-220ENST00000588917 PARD3Q8TEW0 1356 aa26.42■■□□□ 1.82
CIRBP-220ENST00000588917 PLCH1Q4KWH8 1693 aa26.41■■□□□ 1.82
CIRBP-220ENST00000588917 COL18A1P39060 1754 aa26.41■■□□□ 1.82
CIRBP-220ENST00000588917 HSP90AB2PQ58FF8 381 aa26.41■■□□□ 1.82
CIRBP-220ENST00000588917 ANKRD24Q8TF21 1146 aa26.41■■□□□ 1.82
CIRBP-220ENST00000588917 WDR17Q8IZU2 1322 aa26.4■■□□□ 1.82
CIRBP-220ENST00000588917 PPP2R1AP30153 589 aa26.4■■□□□ 1.82
CIRBP-220ENST00000588917 KRT27Q7Z3Y8 459 aa26.4■■□□□ 1.82
CIRBP-220ENST00000588917 COL5A2P05997 1499 aaPredicted RBP26.4■■□□□ 1.82
CIRBP-220ENST00000588917 SF3B2Q13435 895 aaKnown RBP26.39■■□□□ 1.82
CIRBP-220ENST00000588917 TOM1L2Q6ZVM7 507 aa26.39■■□□□ 1.82
CIRBP-220ENST00000588917 PRKRIP1Q9H875 184 aaPredicted RBP26.39■■□□□ 1.82
CIRBP-220ENST00000588917 SMG6Q86US8 1419 aaKnown RBP26.39■■□□□ 1.81
CIRBP-220ENST00000588917 ERBB3P21860 1342 aa26.39■■□□□ 1.81
CIRBP-220ENST00000588917 MAP2P11137 1827 aaKnown RBP26.38■■□□□ 1.81
CIRBP-220ENST00000588917 ANP32CO43423 234 aa26.38■■□□□ 1.81
CIRBP-220ENST00000588917 LARP1Q6PKG0 1096 aaKnown RBP26.38■■□□□ 1.81
CIRBP-220ENST00000588917 CFAP53Q96M91 514 aa26.38■■□□□ 1.81
CIRBP-220ENST00000588917 LTV1Q96GA3 475 aaPredicted RBP26.37■■□□□ 1.81
CIRBP-220ENST00000588917 THRAP3Q9Y2W1 955 aaKnown RBP26.36■■□□□ 1.81
CIRBP-220ENST00000588917 SPATA31A5Q5VU36 1347 aa26.36■■□□□ 1.81
CIRBP-220ENST00000588917 SPATA31A7Q8IWB4 1347 aa26.36■■□□□ 1.81
CIRBP-220ENST00000588917 A0A0G2JS52 829 aa26.35■■□□□ 1.81
CIRBP-220ENST00000588917 CRB1P82279 1406 aa26.35■■□□□ 1.81
CIRBP-220ENST00000588917 MYT1Q01538 1121 aa26.35■■□□□ 1.81
CIRBP-220ENST00000588917 CARD10Q9BWT7 1032 aa26.35■■□□□ 1.81
CIRBP-220ENST00000588917 DEFB132Q7Z7B7 95 aa26.34■■□□□ 1.81
CIRBP-220ENST00000588917 NLRP2Q9NX02 1062 aa26.34■■□□□ 1.81
CIRBP-220ENST00000588917 SPATA31A1Q5TZJ5 1347 aa26.34■■□□□ 1.81
CIRBP-220ENST00000588917 MYBBP1AQ9BQG0 1328 aaKnown RBP26.34■■□□□ 1.81
CIRBP-220ENST00000588917 FAM98CQ17RN3 349 aaKnown RBP26.33■■□□□ 1.81
CIRBP-220ENST00000588917 NRAPQ86VF7 1730 aa26.33■■□□□ 1.81
CIRBP-220ENST00000588917 BRWD3Q6RI45 1802 aa26.32■■□□□ 1.8
CIRBP-220ENST00000588917 TCP11L2Q8N4U5 519 aa26.32■■□□□ 1.8
CIRBP-220ENST00000588917 PEAK1Q9H792 1746 aa26.31■■□□□ 1.8
CIRBP-220ENST00000588917 DIAPH1O60610 1272 aaKnown RBP26.3■■□□□ 1.8
CIRBP-220ENST00000588917 EIF4A2Q14240 407 aaKnown RBP26.3■■□□□ 1.8
CIRBP-220ENST00000588917 USP35Q9P2H5 1018 aa26.3■■□□□ 1.8
CIRBP-220ENST00000588917 BARGINQ6ZT62 677 aa26.29■■□□□ 1.8
CIRBP-220ENST00000588917 RGPD5Q99666 1765 aa26.28■■□□□ 1.8
CIRBP-220ENST00000588917 CDCA7Q9BWT1 371 aaPredicted RBP26.28■■□□□ 1.8
CIRBP-220ENST00000588917 NBPF6Q5VWK0 638 aa26.27■■□□□ 1.8
CIRBP-220ENST00000588917 NBPF4Q96M43 638 aa26.27■■□□□ 1.8
CIRBP-220ENST00000588917 NUDCQ9Y266 331 aa26.27■■□□□ 1.8
CIRBP-220ENST00000588917 IL13P35225 146 aa26.26■■□□□ 1.79
CIRBP-220ENST00000588917 DIEXFQ68CQ4 756 aaKnown RBP26.24■■□□□ 1.79
CIRBP-220ENST00000588917 EYA1Q99502 592 aa26.24■■□□□ 1.79
CIRBP-220ENST00000588917 FAM208AQ9UK61 1670 aaKnown RBP26.23■■□□□ 1.79
CIRBP-220ENST00000588917 BAG6P46379 1132 aa26.23■■□□□ 1.79
CIRBP-220ENST00000588917 IL2RBP14784 551 aa26.2■■□□□ 1.78
CIRBP-220ENST00000588917 RAPGEF4Q8WZA2 1011 aa26.2■■□□□ 1.78
CIRBP-220ENST00000588917 IGSF1Q8N6C5 1336 aa26.18■■□□□ 1.78
CIRBP-220ENST00000588917 U2SURPO15042 1029 aaKnown RBP26.17■■□□□ 1.78
CIRBP-220ENST00000588917 FAM182BQ5T319 152 aa26.17■■□□□ 1.78
CIRBP-220ENST00000588917 EXOC5O00471 708 aa26.16■■□□□ 1.78
CIRBP-220ENST00000588917 TATP17735 454 aaPredicted RBP26.16■■□□□ 1.78
CIRBP-220ENST00000588917 USHBP1Q8N6Y0 703 aa26.16■■□□□ 1.78
CIRBP-220ENST00000588917 SULT6B1Q6IMI4 303 aa26.15■■□□□ 1.78
CIRBP-220ENST00000588917 COL3A1P02461 1466 aaPredicted RBP26.15■■□□□ 1.78
CIRBP-220ENST00000588917 DDB1Q16531 1140 aa26.14■■□□□ 1.78
CIRBP-220ENST00000588917 NCAPD2Q15021 1401 aa26.14■■□□□ 1.77
CIRBP-220ENST00000588917 EN1Q05925 392 aaPredicted RBP26.13■■□□□ 1.77
CIRBP-220ENST00000588917 PDE3BQ13370 1112 aa26.12■■□□□ 1.77
CIRBP-220ENST00000588917 PNNQ9H307 717 aaKnown RBP26.12■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms