RNA–Protein interactions for RNA: ENST00000588913.5

DNMT1-215, Transcript of DNA methyltransferase 1, humanhuman

TSL 5

Gene DNMT1, Length 1,775 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-215ENST00000588913 GJD4Q96KN9 370 aaPredicted RBP24.19■■□□□ 1.46
DNMT1-215ENST00000588913 COL5A2P05997 1499 aaPredicted RBP24.19■■□□□ 1.46
DNMT1-215ENST00000588913 KCNH5Q8NCM2 988 aa24.19■■□□□ 1.46
DNMT1-215ENST00000588913 AATKQ6ZMQ8 1374 aa24.19■■□□□ 1.46
DNMT1-215ENST00000588913 STRN4Q9NRL3 753 aa24.17■■□□□ 1.46
DNMT1-215ENST00000588913 COG3Q96JB2 828 aa24.16■■□□□ 1.46
DNMT1-215ENST00000588913 ANKRD26Q9UPS8 1709 aa24.16■■□□□ 1.46
DNMT1-215ENST00000588913 CDK12Q9NYV4 1490 aaPredicted RBP24.16■■□□□ 1.46
DNMT1-215ENST00000588913 LARP1Q6PKG0 1096 aaKnown RBP24.16■■□□□ 1.46
DNMT1-215ENST00000588913 BRWD3Q6RI45 1802 aa24.15■■□□□ 1.46
DNMT1-215ENST00000588913 PEAK1Q9H792 1746 aa24.15■■□□□ 1.46
DNMT1-215ENST00000588913 SPATA31A5Q5VU36 1347 aa24.14■■□□□ 1.45
DNMT1-215ENST00000588913 SPATA31A7Q8IWB4 1347 aa24.14■■□□□ 1.45
DNMT1-215ENST00000588913 CCDC9Q9Y3X0 531 aaKnown RBP24.14■■□□□ 1.45
DNMT1-215ENST00000588913 MAP3K19Q56UN5 1328 aa24.12■■□□□ 1.45
DNMT1-215ENST00000588913 RRS1Q15050 365 aaKnown RBP24.11■■□□□ 1.45
DNMT1-215ENST00000588913 SPATA31A1Q5TZJ5 1347 aa24.1■■□□□ 1.45
DNMT1-215ENST00000588913 ABCC6O95255 1503 aa24.1■■□□□ 1.45
DNMT1-215ENST00000588913 PER1O15534 1290 aaPredicted RBP24.1■■□□□ 1.45
DNMT1-215ENST00000588913 CGNL1Q0VF96 1302 aa24.1■■□□□ 1.45
DNMT1-215ENST00000588913 THSD7AQ9UPZ6 1657 aa24.09■■□□□ 1.45
DNMT1-215ENST00000588913 EP400Q96L91 3159 aa24.09■■□□□ 1.45
DNMT1-215ENST00000588913 FAM98CQ17RN3 349 aaKnown RBP24.08■■□□□ 1.45
DNMT1-215ENST00000588913 EVA1CP58658 441 aa24.08■■□□□ 1.44
DNMT1-215ENST00000588913 USP35Q9P2H5 1018 aa24.08■■□□□ 1.44
DNMT1-215ENST00000588913 MIER1Q8N108 512 aa24.07■■□□□ 1.44
DNMT1-215ENST00000588913 RGPD2P0DJD1 1756 aa24.06■■□□□ 1.44
DNMT1-215ENST00000588913 AMER1Q5JTC6 1135 aaPredicted RBP24.06■■□□□ 1.44
DNMT1-215ENST00000588913 MAP2P11137 1827 aaKnown RBP24.06■■□□□ 1.44
DNMT1-215ENST00000588913 SOCS7O14512 581 aa24.06■■□□□ 1.44
DNMT1-215ENST00000588913 ONECUT3O60422 494 aaPredicted RBP24.06■■□□□ 1.44
DNMT1-215ENST00000588913 WNK3Q9BYP7 1800 aa24.05■■□□□ 1.44
DNMT1-215ENST00000588913 WDR17Q8IZU2 1322 aa24.05■■□□□ 1.44
DNMT1-215ENST00000588913 CRB1P82279 1406 aa24.04■■□□□ 1.44
DNMT1-215ENST00000588913 SEPT12Q8IYM1 358 aa24.04■■□□□ 1.44
DNMT1-215ENST00000588913 EMILIN1Q9Y6C2 1016 aa24.04■■□□□ 1.44
DNMT1-215ENST00000588913 IP6K1Q92551 441 aa24.03■■□□□ 1.44
DNMT1-215ENST00000588913 HOXC9P31274 260 aa24.03■■□□□ 1.44
DNMT1-215ENST00000588913 TNNT2P45379 298 aaPredicted RBP24.03■■□□□ 1.44
DNMT1-215ENST00000588913 ERBB3P21860 1342 aa24.03■■□□□ 1.44
DNMT1-215ENST00000588913 ANKRD24Q8TF21 1146 aa24.01■■□□□ 1.43
DNMT1-215ENST00000588913 KNSTRNQ9Y448 316 aa24.01■■□□□ 1.43
DNMT1-215ENST00000588913 TOM1L2Q6ZVM7 507 aa24■■□□□ 1.43
DNMT1-215ENST00000588913 LTV1Q96GA3 475 aaPredicted RBP24■■□□□ 1.43
DNMT1-215ENST00000588913 BLMP54132 1417 aaPredicted RBP24■■□□□ 1.43
DNMT1-215ENST00000588913 AMPHP49418 695 aa23.98■■□□□ 1.43
DNMT1-215ENST00000588913 MYT1Q01538 1121 aa23.98■■□□□ 1.43
DNMT1-215ENST00000588913 HSP90AB2PQ58FF8 381 aa23.98■■□□□ 1.43
DNMT1-215ENST00000588913 NSD2O96028 1365 aa23.98■■□□□ 1.43
DNMT1-215ENST00000588913 TCP11L2Q8N4U5 519 aa23.98■■□□□ 1.43
DNMT1-215ENST00000588913 POLKQ9UBT6 870 aa23.98■■□□□ 1.43
DNMT1-215ENST00000588913 FAM208AQ9UK61 1670 aaKnown RBP23.98■■□□□ 1.43
DNMT1-215ENST00000588913 RTL1A6NKG5 1358 aa23.97■■□□□ 1.43
DNMT1-215ENST00000588913 PARP4Q9UKK3 1724 aaKnown RBP23.97■■□□□ 1.43
DNMT1-215ENST00000588913 CSB-PGBD3P0DP91 1061 aa23.97■■□□□ 1.43
DNMT1-215ENST00000588913 LRRC37A3O60309 1634 aa23.96■■□□□ 1.43
DNMT1-215ENST00000588913 CNGB1Q14028 1251 aaPredicted RBP23.96■■□□□ 1.43
DNMT1-215ENST00000588913 CC2D1BQ5T0F9 858 aaKnown RBP23.96■■□□□ 1.43
DNMT1-215ENST00000588913 FAM182BQ5T319 152 aa23.96■■□□□ 1.43
DNMT1-215ENST00000588913 BARGINQ6ZT62 677 aa23.96■■□□□ 1.43
DNMT1-215ENST00000588913 DISP2A7MBM2 1401 aa23.95■■□□□ 1.43
DNMT1-215ENST00000588913 A0A0G2JS52 829 aa23.95■■□□□ 1.42
DNMT1-215ENST00000588913 CARD10Q9BWT7 1032 aa23.95■■□□□ 1.42
DNMT1-215ENST00000588913 FLT4P35916 1363 aa23.94■■□□□ 1.42
DNMT1-215ENST00000588913 MORC1Q86VD1 984 aa23.93■■□□□ 1.42
DNMT1-215ENST00000588913 NLRP2Q9NX02 1062 aa23.93■■□□□ 1.42
DNMT1-215ENST00000588913 INSRP06213 1382 aa23.93■■□□□ 1.42
DNMT1-215ENST00000588913 PPM1GO15355 546 aaPredicted RBP23.92■■□□□ 1.42
DNMT1-215ENST00000588913 SMG6Q86US8 1419 aaKnown RBP23.91■■□□□ 1.42
DNMT1-215ENST00000588913 UPF1Q92900 1129 aaKnown RBP eCLIP23.91■■□□□ 1.42
DNMT1-215ENST00000588913 THRAP3Q9Y2W1 955 aaKnown RBP23.91■■□□□ 1.42
DNMT1-215ENST00000588913 NBPF6Q5VWK0 638 aa23.9■■□□□ 1.42
DNMT1-215ENST00000588913 KRT27Q7Z3Y8 459 aa23.9■■□□□ 1.42
DNMT1-215ENST00000588913 NBPF4Q96M43 638 aa23.9■■□□□ 1.42
DNMT1-215ENST00000588913 KIF24Q5T7B8 1368 aa23.89■■□□□ 1.42
DNMT1-215ENST00000588913 USHBP1Q8N6Y0 703 aa23.89■■□□□ 1.42
DNMT1-215ENST00000588913 NPC1L1Q9UHC9 1359 aa23.89■■□□□ 1.41
DNMT1-215ENST00000588913 YTHDC1Q96MU7 727 aaKnown RBP23.88■■□□□ 1.41
DNMT1-215ENST00000588913 DDX10Q13206 875 aaKnown RBP23.86■■□□□ 1.41
DNMT1-215ENST00000588913 MEGF6O75095 1541 aa23.85■■□□□ 1.41
DNMT1-215ENST00000588913 SHANK3Q9BYB0 1731 aa23.84■■□□□ 1.41
DNMT1-215ENST00000588913 EIF4A2Q14240 407 aaKnown RBP23.83■■□□□ 1.4
DNMT1-215ENST00000588913 NCAPD2Q15021 1401 aa23.81■■□□□ 1.4
DNMT1-215ENST00000588913 MARCH10Q8NA82 808 aaPredicted RBP23.8■■□□□ 1.4
DNMT1-215ENST00000588913 TNS2Q63HR2 1409 aa23.8■■□□□ 1.4
DNMT1-215ENST00000588913 MTHFSP49914 203 aa23.8■■□□□ 1.4
DNMT1-215ENST00000588913 DDB1Q16531 1140 aa23.8■■□□□ 1.4
DNMT1-215ENST00000588913 EYA1Q99502 592 aa23.8■■□□□ 1.4
DNMT1-215ENST00000588913 RGPD1P0DJD0 1748 aa23.79■■□□□ 1.4
DNMT1-215ENST00000588913 IL2RBP14784 551 aa23.79■■□□□ 1.4
DNMT1-215ENST00000588913 SBF2Q86WG5 1849 aa23.78■■□□□ 1.4
DNMT1-215ENST00000588913 TNS1Q9HBL0 1735 aaKnown RBP23.78■■□□□ 1.4
DNMT1-215ENST00000588913 PDE3BQ13370 1112 aa23.78■■□□□ 1.4
DNMT1-215ENST00000588913 COL3A1P02461 1466 aaPredicted RBP23.77■■□□□ 1.4
DNMT1-215ENST00000588913 CDCA7Q9BWT1 371 aaPredicted RBP23.75■■□□□ 1.39
DNMT1-215ENST00000588913 OVOS2A0A0G2JMS6 1433 aa23.75■■□□□ 1.39
DNMT1-215ENST00000588913 PTF1AQ7RTS3 328 aa23.75■■□□□ 1.39
DNMT1-215ENST00000588913 IL13P35225 146 aa23.73■■□□□ 1.39
DNMT1-215ENST00000588913 EXOC5O00471 708 aa23.73■■□□□ 1.39
DNMT1-215ENST00000588913 PARD3Q8TEW0 1356 aa23.72■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms