RNA–Protein interactions for RNA: ENST00000588867.1

NPC1-207, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 5

Gene NPC1, Length 2,000 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-207ENST00000588867 KIF24Q5T7B8 1368 aa19.31■□□□□ 0.68
NPC1-207ENST00000588867 SENP3-EIF4A1A0A087X0R7 540 aa19.3■□□□□ 0.68
NPC1-207ENST00000588867 HNRNPUQ00839 825 aaKnown RBP eCLIP19.3■□□□□ 0.68
NPC1-207ENST00000588867 EIF4A2Q14240 407 aaKnown RBP19.3■□□□□ 0.68
NPC1-207ENST00000588867 LTV1Q96GA3 475 aaPredicted RBP19.3■□□□□ 0.68
NPC1-207ENST00000588867 CRYBG1Q9Y4K1 1723 aa19.3■□□□□ 0.68
NPC1-207ENST00000588867 RTL1A6NKG5 1358 aa19.29■□□□□ 0.68
NPC1-207ENST00000588867 CHRNA2Q15822 529 aa19.29■□□□□ 0.68
NPC1-207ENST00000588867 CCDC146Q8IYE0 955 aa19.29■□□□□ 0.68
NPC1-207ENST00000588867 KIAA0232Q92628 1395 aa19.28■□□□□ 0.68
NPC1-207ENST00000588867 PRDM11Q9NQV5 511 aa19.27■□□□□ 0.67
NPC1-207ENST00000588867 AXIN2Q9Y2T1 843 aa19.27■□□□□ 0.67
NPC1-207ENST00000588867 HMOX1P09601 288 aa19.26■□□□□ 0.67
NPC1-207ENST00000588867 ABCA3Q99758 1704 aa19.25■□□□□ 0.67
NPC1-207ENST00000588867 CPDO75976 1380 aa19.25■□□□□ 0.67
NPC1-207ENST00000588867 HSPA1LP34931 641 aa19.24■□□□□ 0.67
NPC1-207ENST00000588867 COL22A1Q8NFW1 1626 aaPredicted RBP19.24■□□□□ 0.67
NPC1-207ENST00000588867 NUTM2BA6NNL0 878 aaPredicted RBP19.24■□□□□ 0.67
NPC1-207ENST00000588867 NUTM2EB1AL46 878 aaPredicted RBP19.24■□□□□ 0.67
NPC1-207ENST00000588867 NUTM2AQ8IVF1 878 aaPredicted RBP19.24■□□□□ 0.67
NPC1-207ENST00000588867 ANKRD24Q8TF21 1146 aa19.23■□□□□ 0.67
NPC1-207ENST00000588867 BLMP54132 1417 aaPredicted RBP19.23■□□□□ 0.67
NPC1-207ENST00000588867 RGPD5Q99666 1765 aa19.23■□□□□ 0.67
NPC1-207ENST00000588867 FCHSD2O94868 740 aa19.22■□□□□ 0.67
NPC1-207ENST00000588867 SULT6B1Q6IMI4 303 aa19.22■□□□□ 0.67
NPC1-207ENST00000588867 EYA1Q99502 592 aa19.22■□□□□ 0.67
NPC1-207ENST00000588867 SALL2Q9Y467 1007 aaPredicted RBP19.22■□□□□ 0.67
NPC1-207ENST00000588867 RUNDC1Q96C34 613 aa19.22■□□□□ 0.67
NPC1-207ENST00000588867 PNNQ9H307 717 aaKnown RBP19.22■□□□□ 0.67
NPC1-207ENST00000588867 FAM83GA6ND36 823 aa19.2■□□□□ 0.66
NPC1-207ENST00000588867 ADAMTS2O95450 1211 aa19.2■□□□□ 0.66
NPC1-207ENST00000588867 JCADQ9P266 1359 aa19.2■□□□□ 0.66
NPC1-207ENST00000588867 COL18A1P39060 1754 aa19.2■□□□□ 0.66
NPC1-207ENST00000588867 APAF1O14727 1248 aa19.2■□□□□ 0.66
NPC1-207ENST00000588867 PRKAR2BP31323 418 aa19.2■□□□□ 0.66
NPC1-207ENST00000588867 AEBP1Q8IUX7 1158 aa19.2■□□□□ 0.66
NPC1-207ENST00000588867 RSPH6AQ9H0K4 717 aa19.2■□□□□ 0.66
NPC1-207ENST00000588867 CSB-PGBD3P0DP91 1061 aa19.19■□□□□ 0.66
NPC1-207ENST00000588867 NEFMP07197 916 aa19.18■□□□□ 0.66
NPC1-207ENST00000588867 NBPF6Q5VWK0 638 aa19.18■□□□□ 0.66
NPC1-207ENST00000588867 NBPF4Q96M43 638 aa19.18■□□□□ 0.66
NPC1-207ENST00000588867 MAPK8IP3Q9UPT6 1336 aa19.18■□□□□ 0.66
NPC1-207ENST00000588867 USHBP1Q8N6Y0 703 aa19.18■□□□□ 0.66
NPC1-207ENST00000588867 PLEKHF1Q96S99 279 aa19.18■□□□□ 0.66
NPC1-207ENST00000588867 ERBB3P21860 1342 aa19.18■□□□□ 0.66
NPC1-207ENST00000588867 IGSF1Q8N6C5 1336 aa19.18■□□□□ 0.66
NPC1-207ENST00000588867 RGPD1P0DJD0 1748 aa19.17■□□□□ 0.66
NPC1-207ENST00000588867 NEUROD2Q15784 382 aa19.17■□□□□ 0.66
NPC1-207ENST00000588867 TCP11L2Q8N4U5 519 aa19.17■□□□□ 0.66
NPC1-207ENST00000588867 NLRP2Q9NX02 1062 aa19.16■□□□□ 0.66
NPC1-207ENST00000588867 RGPD2P0DJD1 1756 aa19.15■□□□□ 0.66
NPC1-207ENST00000588867 EVA1CP58658 441 aa19.15■□□□□ 0.66
NPC1-207ENST00000588867 RRP7AQ9Y3A4 280 aaKnown RBP19.15■□□□□ 0.66
NPC1-207ENST00000588867 CAMTA1Q9Y6Y1 1673 aa19.15■□□□□ 0.66
NPC1-207ENST00000588867 ABCC6O95255 1503 aa19.15■□□□□ 0.66
NPC1-207ENST00000588867 STRN4Q9NRL3 753 aa19.15■□□□□ 0.66
NPC1-207ENST00000588867 BTG4Q9NY30 223 aa19.15■□□□□ 0.66
NPC1-207ENST00000588867 PHACTR3Q96KR7 559 aa19.14■□□□□ 0.65
NPC1-207ENST00000588867 ZBED9Q6R2W3 1325 aa19.14■□□□□ 0.65
NPC1-207ENST00000588867 LMO7Q8WWI1 1683 aa19.13■□□□□ 0.65
NPC1-207ENST00000588867 SPATA31A6Q5VVP1 1343 aa19.12■□□□□ 0.65
NPC1-207ENST00000588867 TOM1L2Q6ZVM7 507 aa19.12■□□□□ 0.65
NPC1-207ENST00000588867 KDRP35968 1356 aa19.11■□□□□ 0.65
NPC1-207ENST00000588867 COL14A1Q05707 1796 aaKnown RBP19.11■□□□□ 0.65
NPC1-207ENST00000588867 COL5A2P05997 1499 aaPredicted RBP19.11■□□□□ 0.65
NPC1-207ENST00000588867 WDR17Q8IZU2 1322 aa19.1■□□□□ 0.65
NPC1-207ENST00000588867 CENPBP07199 599 aaPredicted RBP19.1■□□□□ 0.65
NPC1-207ENST00000588867 TMPOP42166 694 aaKnown RBP19.1■□□□□ 0.65
NPC1-207ENST00000588867 RIPK4P57078 832 aa19.09■□□□□ 0.65
NPC1-207ENST00000588867 LARP1Q6PKG0 1096 aaKnown RBP19.09■□□□□ 0.65
NPC1-207ENST00000588867 C8orf37Q96NL8 207 aa19.08■□□□□ 0.64
NPC1-207ENST00000588867 NFE2L2Q16236 605 aa19.07■□□□□ 0.64
NPC1-207ENST00000588867 NGEFQ8N5V2 710 aa19.07■□□□□ 0.64
NPC1-207ENST00000588867 NGLY1Q96IV0 654 aa19.07■□□□□ 0.64
NPC1-207ENST00000588867 FAM208AQ9UK61 1670 aaKnown RBP19.07■□□□□ 0.64
NPC1-207ENST00000588867 MEX3CQ5U5Q3 659 aaKnown RBP19.07■□□□□ 0.64
NPC1-207ENST00000588867 USP35Q9P2H5 1018 aa19.06■□□□□ 0.64
NPC1-207ENST00000588867 RAPGEF4Q8WZA2 1011 aa19.05■□□□□ 0.64
NPC1-207ENST00000588867 PLCH1Q4KWH8 1693 aa19.05■□□□□ 0.64
NPC1-207ENST00000588867 MTHFSDQ2M296 383 aaKnown RBP19.05■□□□□ 0.64
NPC1-207ENST00000588867 WWC1Q8IX03 1113 aa19.05■□□□□ 0.64
NPC1-207ENST00000588867 LRP6O75581 1613 aa19.04■□□□□ 0.64
NPC1-207ENST00000588867 NCAPD2Q15021 1401 aa19.04■□□□□ 0.64
NPC1-207ENST00000588867 CARD10Q9BWT7 1032 aa19.04■□□□□ 0.64
NPC1-207ENST00000588867 FBXO41Q8TF61 875 aa19.03■□□□□ 0.64
NPC1-207ENST00000588867 TATP17735 454 aaPredicted RBP19.03■□□□□ 0.64
NPC1-207ENST00000588867 CRB1P82279 1406 aa19.02■□□□□ 0.64
NPC1-207ENST00000588867 CCDC27Q2M243 656 aa19.02■□□□□ 0.64
NPC1-207ENST00000588867 PLEKHO1Q53GL0 409 aaPredicted RBP19.02■□□□□ 0.64
NPC1-207ENST00000588867 GAS2L2Q8NHY3 880 aa19.02■□□□□ 0.64
NPC1-207ENST00000588867 TRIM35Q9UPQ4 493 aa19.02■□□□□ 0.64
NPC1-207ENST00000588867 NCBP3Q53F19 620 aaKnown RBP19.01■□□□□ 0.63
NPC1-207ENST00000588867 CDCA7LQ96GN5 454 aa19.01■□□□□ 0.63
NPC1-207ENST00000588867 ZNF521Q96K83 1311 aa19.01■□□□□ 0.63
NPC1-207ENST00000588867 DLG5Q8TDM6 1919 aa19■□□□□ 0.63
NPC1-207ENST00000588867 GOLGA2Q08379 1002 aa19■□□□□ 0.63
NPC1-207ENST00000588867 PDE3BQ13370 1112 aa19■□□□□ 0.63
NPC1-207ENST00000588867 PHF23Q9BUL5 403 aaPredicted RBP19■□□□□ 0.63
NPC1-207ENST00000588867 CCDC9Q9Y3X0 531 aaKnown RBP19■□□□□ 0.63
NPC1-207ENST00000588867 SLIT2O94813 1529 aa19■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms