RNA–Protein interactions for RNA: ENST00000588780.5

CAPNS1-205, Transcript of calpain small subunit 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CAPNS1, Length 1,035 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPNS1-205ENST00000588780 PROM2Q8N271 834 aa31.65■■■□□ 2.66
CAPNS1-205ENST00000588780 MARCH10Q8NA82 808 aaPredicted RBP31.65■■■□□ 2.66
CAPNS1-205ENST00000588780 MYOM1P52179 1685 aa31.64■■■□□ 2.66
CAPNS1-205ENST00000588780 SENP3-EIF4A1A0A087X0R7 540 aa31.64■■■□□ 2.66
CAPNS1-205ENST00000588780 CSB-PGBD3P0DP91 1061 aa31.64■■■□□ 2.66
CAPNS1-205ENST00000588780 CDCA7Q9BWT1 371 aaPredicted RBP31.64■■■□□ 2.66
CAPNS1-205ENST00000588780 FHDC1Q9C0D6 1143 aaPredicted RBP31.64■■■□□ 2.66
CAPNS1-205ENST00000588780 TXNRD1Q16881 649 aa31.63■■■□□ 2.65
CAPNS1-205ENST00000588780 BRD4O60885 1362 aaPredicted RBP31.62■■■□□ 2.65
CAPNS1-205ENST00000588780 SYT17Q9BSW7 474 aa31.62■■■□□ 2.65
CAPNS1-205ENST00000588780 WDR17Q8IZU2 1322 aa31.61■■■□□ 2.65
CAPNS1-205ENST00000588780 CABP1Q9NZU7 370 aa31.61■■■□□ 2.65
CAPNS1-205ENST00000588780 SLC15A2Q16348 729 aa31.6■■■□□ 2.65
CAPNS1-205ENST00000588780 CENPJQ9HC77 1338 aaPredicted RBP31.59■■■□□ 2.65
CAPNS1-205ENST00000588780 SOX12O15370 315 aa31.59■■■□□ 2.65
CAPNS1-205ENST00000588780 NBPF1Q3BBV0 1214 aa31.58■■■□□ 2.65
CAPNS1-205ENST00000588780 AXIN2Q9Y2T1 843 aa31.58■■■□□ 2.65
CAPNS1-205ENST00000588780 EXOC5O00471 708 aa31.57■■■□□ 2.64
CAPNS1-205ENST00000588780 MTFR1LQ9H019 292 aa31.57■■■□□ 2.64
CAPNS1-205ENST00000588780 USP6P35125 1406 aa31.57■■■□□ 2.64
CAPNS1-205ENST00000588780 AKAP12Q02952 1782 aa31.56■■■□□ 2.64
CAPNS1-205ENST00000588780 SLIT3O75094 1523 aa31.54■■■□□ 2.64
CAPNS1-205ENST00000588780 CARD10Q9BWT7 1032 aa31.52■■■□□ 2.64
CAPNS1-205ENST00000588780 BCL9O00512 1426 aa31.51■■■□□ 2.64
CAPNS1-205ENST00000588780 C1QTNF8P60827 252 aa31.51■■■□□ 2.63
CAPNS1-205ENST00000588780 CPSF1Q10570 1443 aaKnown RBP31.5■■■□□ 2.63
CAPNS1-205ENST00000588780 KIAA1210Q9ULL0 1709 aa31.5■■■□□ 2.63
CAPNS1-205ENST00000588780 WNK3Q9BYP7 1800 aa31.5■■■□□ 2.63
CAPNS1-205ENST00000588780 KCNH5Q8NCM2 988 aa31.5■■■□□ 2.63
CAPNS1-205ENST00000588780 ARXQ96QS3 562 aa31.5■■■□□ 2.63
CAPNS1-205ENST00000588780 ARHGEF25Q86VW2 580 aa31.48■■■□□ 2.63
CAPNS1-205ENST00000588780 ACSBG1Q96GR2 724 aa31.47■■■□□ 2.63
CAPNS1-205ENST00000588780 COL18A1P39060 1754 aa31.47■■■□□ 2.63
CAPNS1-205ENST00000588780 CHD4Q14839 1912 aa31.46■■■□□ 2.63
CAPNS1-205ENST00000588780 GPR162Q16538 588 aa31.46■■■□□ 2.63
CAPNS1-205ENST00000588780 KLHL34Q8N239 644 aa31.45■■■□□ 2.63
CAPNS1-205ENST00000588780 PIK3C2AO00443 1686 aa31.44■■■□□ 2.62
CAPNS1-205ENST00000588780 SGIP1Q9BQI5 828 aa31.43■■■□□ 2.62
CAPNS1-205ENST00000588780 CCDC7Q96M83 1385 aa31.43■■■□□ 2.62
CAPNS1-205ENST00000588780 QRICH2Q9H0J4 1663 aa31.42■■■□□ 2.62
CAPNS1-205ENST00000588780 RGPD5Q99666 1765 aa31.41■■■□□ 2.62
CAPNS1-205ENST00000588780 PELP1Q8IZL8 1130 aaKnown RBP31.41■■■□□ 2.62
CAPNS1-205ENST00000588780 TTC21BQ7Z4L5 1316 aa31.41■■■□□ 2.62
CAPNS1-205ENST00000588780 EVC2Q86UK5 1308 aa31.41■■■□□ 2.62
CAPNS1-205ENST00000588780 ZNF692Q9BU19 519 aaPredicted RBP31.39■■■□□ 2.62
CAPNS1-205ENST00000588780 TNS2Q63HR2 1409 aa31.39■■■□□ 2.62
CAPNS1-205ENST00000588780 GIGYF1O75420 1035 aaPredicted RBP31.36■■■□□ 2.61
CAPNS1-205ENST00000588780 NLRP2Q9NX02 1062 aa31.36■■■□□ 2.61
CAPNS1-205ENST00000588780 UTRNP46939 3433 aa31.36■■■□□ 2.61
CAPNS1-205ENST00000588780 TTC21AQ8NDW8 1320 aa31.34■■■□□ 2.61
CAPNS1-205ENST00000588780 KAT6BQ8WYB5 2073 aa31.34■■■□□ 2.61
CAPNS1-205ENST00000588780 NHSQ6T4R5 1651 aa31.32■■■□□ 2.6
CAPNS1-205ENST00000588780 POLD1P28340 1107 aa31.32■■■□□ 2.6
CAPNS1-205ENST00000588780 ZNF827Q17R98 1081 aa31.32■■■□□ 2.6
CAPNS1-205ENST00000588780 MAP3K5Q99683 1374 aa31.31■■■□□ 2.6
CAPNS1-205ENST00000588780 IL2RBP14784 551 aa31.29■■■□□ 2.6
CAPNS1-205ENST00000588780 TRPM1Q7Z4N2 1603 aa31.28■■■□□ 2.6
CAPNS1-205ENST00000588780 KTN1Q86UP2 1357 aaKnown RBP31.28■■■□□ 2.6
CAPNS1-205ENST00000588780 SUGP2Q8IX01 1082 aaKnown RBP eCLIP31.26■■■□□ 2.59
CAPNS1-205ENST00000588780 NFAT5O94916 1531 aa31.25■■■□□ 2.59
CAPNS1-205ENST00000588780 ABCC6O95255 1503 aa31.25■■■□□ 2.59
CAPNS1-205ENST00000588780 IFFO2Q5TF58 517 aa31.25■■■□□ 2.59
CAPNS1-205ENST00000588780 LRRC4BQ9NT99 713 aa31.25■■■□□ 2.59
CAPNS1-205ENST00000588780 SLC16A10Q8TF71 515 aa31.24■■■□□ 2.59
CAPNS1-205ENST00000588780 BTAF1O14981 1849 aa31.24■■■□□ 2.59
CAPNS1-205ENST00000588780 PAPPAQ13219 1627 aa31.24■■■□□ 2.59
CAPNS1-205ENST00000588780 ERBB3P21860 1342 aa31.23■■■□□ 2.59
CAPNS1-205ENST00000588780 TFCP2L1Q9NZI6 479 aa31.22■■■□□ 2.59
CAPNS1-205ENST00000588780 ANKRD24Q8TF21 1146 aa31.2■■■□□ 2.59
CAPNS1-205ENST00000588780 DDX54Q8TDD1 881 aaKnown RBP31.19■■■□□ 2.58
CAPNS1-205ENST00000588780 AKT1S1Q96B36 256 aa31.19■■■□□ 2.58
CAPNS1-205ENST00000588780 SLC27A3Q5K4L6 730 aa31.18■■■□□ 2.58
CAPNS1-205ENST00000588780 SYTL4Q96C24 671 aaPredicted RBP31.18■■■□□ 2.58
CAPNS1-205ENST00000588780 NLGN2Q8NFZ4 835 aa31.16■■■□□ 2.58
CAPNS1-205ENST00000588780 MSH5O43196 834 aa31.15■■■□□ 2.58
CAPNS1-205ENST00000588780 NME9Q86XW9 330 aa31.15■■■□□ 2.58
CAPNS1-205ENST00000588780 PNPLA7Q6ZV29 1317 aa31.15■■■□□ 2.58
CAPNS1-205ENST00000588780 KCNQ4P56696 695 aa31.14■■■□□ 2.58
CAPNS1-205ENST00000588780 L3MBTL2Q969R5 705 aa31.14■■■□□ 2.58
CAPNS1-205ENST00000588780 ROCK2O75116 1388 aaKnown RBP31.14■■■□□ 2.58
CAPNS1-205ENST00000588780 GRIN3BO60391 1043 aa31.11■■■□□ 2.57
CAPNS1-205ENST00000588780 TMC1Q8TDI8 760 aa31.11■■■□□ 2.57
CAPNS1-205ENST00000588780 LTV1Q96GA3 475 aaPredicted RBP31.1■■■□□ 2.57
CAPNS1-205ENST00000588780 USP31Q70CQ4 1352 aa31.09■■■□□ 2.57
CAPNS1-205ENST00000588780 LTN1O94822 1766 aa31.08■■■□□ 2.57
CAPNS1-205ENST00000588780 PRIM1P49642 420 aaKnown RBP31.07■■■□□ 2.56
CAPNS1-205ENST00000588780 HDGFL2Q7Z4V5 671 aaPredicted RBP31.07■■■□□ 2.56
CAPNS1-205ENST00000588780 MON2Q7Z3U7 1717 aa31.05■■■□□ 2.56
CAPNS1-205ENST00000588780 YBX3P16989 372 aaKnown RBP eCLIP31.05■■■□□ 2.564e-7■■■□□ 18.5
CAPNS1-205ENST00000588780 SHANK3Q9BYB0 1731 aa31.04■■■□□ 2.56
CAPNS1-205ENST00000588780 QSER1Q2KHR3 1735 aa31.04■■■□□ 2.56
CAPNS1-205ENST00000588780 CCNL1Q9UK58 526 aaPredicted RBP31.02■■■□□ 2.56
CAPNS1-205ENST00000588780 MSL1Q68DK7 614 aa31■■■□□ 2.55
CAPNS1-205ENST00000588780 SBNO2Q9Y2G9 1366 aa31■■■□□ 2.55
CAPNS1-205ENST00000588780 ANKRD36BQ8N2N9 1353 aa30.99■■■□□ 2.55
CAPNS1-205ENST00000588780 IP6K1Q92551 441 aa30.98■■■□□ 2.55
CAPNS1-205ENST00000588780 GPBP1L1Q9HC44 474 aaPredicted RBP30.98■■■□□ 2.55
CAPNS1-205ENST00000588780 TUBGCP6Q96RT7 1819 aa30.98■■■□□ 2.55
CAPNS1-205ENST00000588780 ATP10DQ9P241 1426 aa30.98■■■□□ 2.55
CAPNS1-205ENST00000588780 NEUROD1Q13562 356 aa30.97■■■□□ 2.55
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms