RNA–Protein interactions for RNA: ENST00000588692.5

DDX39A-208, Transcript of DExD-box helicase 39A, humanhuman

TSL 5

Gene DDX39A, Length 1,478 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-208ENST00000588692 RGPD1P0DJD0 1748 aa20.25■□□□□ 0.83
DDX39A-208ENST00000588692 PARP4Q9UKK3 1724 aaKnown RBP20.25■□□□□ 0.83
DDX39A-208ENST00000588692 SF3B2Q13435 895 aaKnown RBP20.25■□□□□ 0.83
DDX39A-208ENST00000588692 CDCA8Q53HL2 280 aa20.24■□□□□ 0.83
DDX39A-208ENST00000588692 NME9Q86XW9 330 aa20.24■□□□□ 0.83
DDX39A-208ENST00000588692 RGPD5Q99666 1765 aa20.24■□□□□ 0.83
DDX39A-208ENST00000588692 LTN1O94822 1766 aa20.24■□□□□ 0.83
DDX39A-208ENST00000588692 ANKRD36BQ8N2N9 1353 aa20.23■□□□□ 0.83
DDX39A-208ENST00000588692 WNK3Q9BYP7 1800 aa20.23■□□□□ 0.83
DDX39A-208ENST00000588692 SOX12O15370 315 aa20.23■□□□□ 0.83
DDX39A-208ENST00000588692 OVOS2A0A0J9YW53 1432 aa20.22■□□□□ 0.83
DDX39A-208ENST00000588692 OVOS2Q6IE36 1432 aa20.22■□□□□ 0.83
DDX39A-208ENST00000588692 WDR17Q8IZU2 1322 aa20.22■□□□□ 0.83
DDX39A-208ENST00000588692 ZRANB1Q9UGI0 708 aa20.21■□□□□ 0.83
DDX39A-208ENST00000588692 AXIN2Q9Y2T1 843 aa20.21■□□□□ 0.83
DDX39A-208ENST00000588692 TOM1L2Q6ZVM7 507 aa20.19■□□□□ 0.82
DDX39A-208ENST00000588692 TNS1Q9HBL0 1735 aaKnown RBP20.19■□□□□ 0.82
DDX39A-208ENST00000588692 PDE3BQ13370 1112 aa20.18■□□□□ 0.82
DDX39A-208ENST00000588692 MYOM1P52179 1685 aa20.18■□□□□ 0.82
DDX39A-208ENST00000588692 LRRC37A3O60309 1634 aa20.18■□□□□ 0.82
DDX39A-208ENST00000588692 FAM196AQ6ZSG2 479 aa20.18■□□□□ 0.82
DDX39A-208ENST00000588692 BAG6P46379 1132 aa20.17■□□□□ 0.82
DDX39A-208ENST00000588692 FAM182BQ5T319 152 aa20.17■□□□□ 0.82
DDX39A-208ENST00000588692 DEFB132Q7Z7B7 95 aa20.16■□□□□ 0.82
DDX39A-208ENST00000588692 CSB-PGBD3P0DP91 1061 aa20.15■□□□□ 0.82
DDX39A-208ENST00000588692 CDCA7Q9BWT1 371 aaPredicted RBP20.15■□□□□ 0.82
DDX39A-208ENST00000588692 CARD10Q9BWT7 1032 aa20.15■□□□□ 0.82
DDX39A-208ENST00000588692 DISP2A7MBM2 1401 aa20.15■□□□□ 0.82
DDX39A-208ENST00000588692 C11orf95C9JLR9 678 aaPredicted RBP20.14■□□□□ 0.81
DDX39A-208ENST00000588692 COG3Q96JB2 828 aa20.14■□□□□ 0.81
DDX39A-208ENST00000588692 KIF20BQ96Q89 1820 aa20.14■□□□□ 0.81
DDX39A-208ENST00000588692 CCDC7Q96M83 1385 aa20.13■□□□□ 0.81
DDX39A-208ENST00000588692 ERBB3P21860 1342 aa20.13■□□□□ 0.81
DDX39A-208ENST00000588692 FAM208AQ9UK61 1670 aaKnown RBP20.12■□□□□ 0.81
DDX39A-208ENST00000588692 PEAK1Q9H792 1746 aa20.12■□□□□ 0.81
DDX39A-208ENST00000588692 OVOS2A0A0G2JMS6 1433 aa20.11■□□□□ 0.81
DDX39A-208ENST00000588692 EIF4G2P78344 907 aaKnown RBP eCLIP20.11■□□□□ 0.81
DDX39A-208ENST00000588692 DDB1Q16531 1140 aa20.11■□□□□ 0.81
DDX39A-208ENST00000588692 TRIM37O94972 964 aa20.08■□□□□ 0.81
DDX39A-208ENST00000588692 FYB1O15117 783 aa20.07■□□□□ 0.8
DDX39A-208ENST00000588692 ANKRD24Q8TF21 1146 aa20.07■□□□□ 0.8
DDX39A-208ENST00000588692 IP6K1Q92551 441 aa20.07■□□□□ 0.8
DDX39A-208ENST00000588692 PARD3Q8TEW0 1356 aa20.07■□□□□ 0.8
DDX39A-208ENST00000588692 SBF2Q86WG5 1849 aa20.07■□□□□ 0.8
DDX39A-208ENST00000588692 RTL1A6NKG5 1358 aa20.06■□□□□ 0.8
DDX39A-208ENST00000588692 TNS2Q63HR2 1409 aa20.05■□□□□ 0.8
DDX39A-208ENST00000588692 NSD3Q9BZ95 1437 aa20.05■□□□□ 0.8
DDX39A-208ENST00000588692 MAP3K19Q56UN5 1328 aa20.05■□□□□ 0.8
DDX39A-208ENST00000588692 EN1Q05925 392 aaPredicted RBP20.05■□□□□ 0.8
DDX39A-208ENST00000588692 NLRP2Q9NX02 1062 aa20.05■□□□□ 0.8
DDX39A-208ENST00000588692 BCL9O00512 1426 aa20.05■□□□□ 0.8
DDX39A-208ENST00000588692 HSPA5P11021 654 aaKnown RBP20.05■□□□□ 0.8
DDX39A-208ENST00000588692 GGNBP2Q9H3C7 697 aa20.05■□□□□ 0.8
DDX39A-208ENST00000588692 RREB1Q92766 1687 aa20.04■□□□□ 0.8
DDX39A-208ENST00000588692 RGPD3A6NKT7 1758 aaPredicted RBP20.03■□□□□ 0.8
DDX39A-208ENST00000588692 RGPD4Q7Z3J3 1758 aa20.03■□□□□ 0.8
DDX39A-208ENST00000588692 APBA3O96018 575 aa20.03■□□□□ 0.8
DDX39A-208ENST00000588692 EXOC5O00471 708 aa20.02■□□□□ 0.8
DDX39A-208ENST00000588692 HOXC9P31274 260 aa20.02■□□□□ 0.8
DDX39A-208ENST00000588692 AMPHP49418 695 aa20.02■□□□□ 0.8
DDX39A-208ENST00000588692 CARD14Q9BXL6 1004 aa20.02■□□□□ 0.8
DDX39A-208ENST00000588692 IL2RBP14784 551 aa20.01■□□□□ 0.79
DDX39A-208ENST00000588692 MARCH10Q8NA82 808 aaPredicted RBP20.01■□□□□ 0.79
DDX39A-208ENST00000588692 CAMKK2Q96RR4 588 aa20.01■□□□□ 0.79
DDX39A-208ENST00000588692 KIF24Q5T7B8 1368 aa20■□□□□ 0.79
DDX39A-208ENST00000588692 EZH2Q15910 746 aaKnown RBP19.99■□□□□ 0.79
DDX39A-208ENST00000588692 CGNL1Q0VF96 1302 aa19.99■□□□□ 0.79
DDX39A-208ENST00000588692 ANKRD26Q9UPS8 1709 aa19.99■□□□□ 0.79
DDX39A-208ENST00000588692 NUP188Q5SRE5 1749 aa19.98■□□□□ 0.79
DDX39A-208ENST00000588692 SMG6Q86US8 1419 aaKnown RBP19.98■□□□□ 0.79
DDX39A-208ENST00000588692 FBLN1P23142 703 aa19.98■□□□□ 0.79
DDX39A-208ENST00000588692 RRS1Q15050 365 aaKnown RBP19.98■□□□□ 0.79
DDX39A-208ENST00000588692 LTV1Q96GA3 475 aaPredicted RBP19.98■□□□□ 0.79
DDX39A-208ENST00000588692 POLR3GLQ9BT43 218 aa19.98■□□□□ 0.79
DDX39A-208ENST00000588692 RGPD2P0DJD1 1756 aa19.97■□□□□ 0.79
DDX39A-208ENST00000588692 BCL11BQ9C0K0 894 aaPredicted RBP19.96■□□□□ 0.79
DDX39A-208ENST00000588692 FLT4P35916 1363 aa19.96■□□□□ 0.79
DDX39A-208ENST00000588692 NHSQ6T4R5 1651 aa19.96■□□□□ 0.79
DDX39A-208ENST00000588692 INSRP06213 1382 aa19.95■□□□□ 0.78
DDX39A-208ENST00000588692 LRP5O75197 1615 aa19.93■□□□□ 0.78
DDX39A-208ENST00000588692 PLSCR1O15162 318 aa19.92■□□□□ 0.78
DDX39A-208ENST00000588692 SRCAPQ6ZRS2 3230 aa19.92■□□□□ 0.78
DDX39A-208ENST00000588692 MAP2P11137 1827 aaKnown RBP19.91■□□□□ 0.78
DDX39A-208ENST00000588692 PSDA5PKW4 1024 aaPredicted RBP19.91■□□□□ 0.78
DDX39A-208ENST00000588692 NSD2O96028 1365 aa19.89■□□□□ 0.78
DDX39A-208ENST00000588692 R3HDM1Q15032 1099 aaKnown RBP19.89■□□□□ 0.77
DDX39A-208ENST00000588692 HSP90AB2PQ58FF8 381 aa19.89■□□□□ 0.77
DDX39A-208ENST00000588692 NBPF14Q5TI25 921 aa19.89■□□□□ 0.77
DDX39A-208ENST00000588692 PANK3Q9H999 370 aa19.89■□□□□ 0.77
DDX39A-208ENST00000588692 SHANK3Q9BYB0 1731 aa19.89■□□□□ 0.77
DDX39A-208ENST00000588692 MEGF6O75095 1541 aa19.89■□□□□ 0.77
DDX39A-208ENST00000588692 NBPF6Q5VWK0 638 aa19.88■□□□□ 0.77
DDX39A-208ENST00000588692 PTF1AQ7RTS3 328 aa19.88■□□□□ 0.77
DDX39A-208ENST00000588692 NBPF4Q96M43 638 aa19.88■□□□□ 0.77
DDX39A-208ENST00000588692 EMILIN1Q9Y6C2 1016 aa19.88■□□□□ 0.77
DDX39A-208ENST00000588692 BTAF1O14981 1849 aa19.86■□□□□ 0.77
DDX39A-208ENST00000588692 WASHC2AQ641Q2 1341 aa19.85■□□□□ 0.77
DDX39A-208ENST00000588692 RAPGEF4Q8WZA2 1011 aa19.85■□□□□ 0.77
DDX39A-208ENST00000588692 KCNQ2O43526 872 aa19.84■□□□□ 0.77
DDX39A-208ENST00000588692 NCAPD2Q15021 1401 aa19.84■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms