RNA–Protein interactions for RNA: ENST00000588269.1

PRKCSH-207, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 5

Gene PRKCSH, Length 557 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-207ENST00000588269 ANKRD36BQ8N2N9 1353 aa16.35■□□□□ 0.21
PRKCSH-207ENST00000588269 DISP2A7MBM2 1401 aa16.35■□□□□ 0.21
PRKCSH-207ENST00000588269 CD163L1Q9NR16 1453 aa16.35■□□□□ 0.21
PRKCSH-207ENST00000588269 ABCC6O95255 1503 aa16.35■□□□□ 0.21
PRKCSH-207ENST00000588269 LMO7Q8WWI1 1683 aa16.34■□□□□ 0.21
PRKCSH-207ENST00000588269 APBA3O96018 575 aa16.34■□□□□ 0.21
PRKCSH-207ENST00000588269 USP54Q70EL1 1684 aa16.34■□□□□ 0.21
PRKCSH-207ENST00000588269 EIF4G2P78344 907 aaKnown RBP eCLIP16.33■□□□□ 0.2
PRKCSH-207ENST00000588269 FAM196AQ6ZSG2 479 aa16.33■□□□□ 0.2
PRKCSH-207ENST00000588269 SLC12A5Q9H2X9 1139 aa16.33■□□□□ 0.2
PRKCSH-207ENST00000588269 AATKQ6ZMQ8 1374 aa16.32■□□□□ 0.2
PRKCSH-207ENST00000588269 USP31Q70CQ4 1352 aa16.32■□□□□ 0.2
PRKCSH-207ENST00000588269 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.32■□□□□ 0.2
PRKCSH-207ENST00000588269 NUP188Q5SRE5 1749 aa16.31■□□□□ 0.2
PRKCSH-207ENST00000588269 RREB1Q92766 1687 aa16.3■□□□□ 0.2
PRKCSH-207ENST00000588269 PDE3BQ13370 1112 aa16.3■□□□□ 0.2
PRKCSH-207ENST00000588269 BARGINQ6ZT62 677 aa16.3■□□□□ 0.2
PRKCSH-207ENST00000588269 COL5A2P05997 1499 aaPredicted RBP16.29■□□□□ 0.2
PRKCSH-207ENST00000588269 TCP11L2Q8N4U5 519 aa16.29■□□□□ 0.2
PRKCSH-207ENST00000588269 NFAT5O94916 1531 aa16.29■□□□□ 0.2
PRKCSH-207ENST00000588269 OVOS2A0A0J9YW53 1432 aa16.28■□□□□ 0.2
PRKCSH-207ENST00000588269 CRB1P82279 1406 aa16.28■□□□□ 0.2
PRKCSH-207ENST00000588269 OVOS2Q6IE36 1432 aa16.28■□□□□ 0.2
PRKCSH-207ENST00000588269 SOX12O15370 315 aa16.27■□□□□ 0.2
PRKCSH-207ENST00000588269 PTF1AQ7RTS3 328 aa16.27■□□□□ 0.2
PRKCSH-207ENST00000588269 THRAP3Q9Y2W1 955 aaKnown RBP16.27■□□□□ 0.2
PRKCSH-207ENST00000588269 NME9Q86XW9 330 aa16.26■□□□□ 0.19
PRKCSH-207ENST00000588269 COG3Q96JB2 828 aa16.26■□□□□ 0.19
PRKCSH-207ENST00000588269 PARP4Q9UKK3 1724 aaKnown RBP16.25■□□□□ 0.19
PRKCSH-207ENST00000588269 ARHGEF25Q86VW2 580 aa16.25■□□□□ 0.19
PRKCSH-207ENST00000588269 LRRC37A3O60309 1634 aa16.24■□□□□ 0.19
PRKCSH-207ENST00000588269 CSB-PGBD3P0DP91 1061 aa16.24■□□□□ 0.19
PRKCSH-207ENST00000588269 MYOM1P52179 1685 aa16.24■□□□□ 0.19
PRKCSH-207ENST00000588269 PEAK1Q9H792 1746 aa16.23■□□□□ 0.19
PRKCSH-207ENST00000588269 HSPA5P11021 654 aaKnown RBP16.23■□□□□ 0.19
PRKCSH-207ENST00000588269 TOM1L2Q6ZVM7 507 aa16.23■□□□□ 0.19
PRKCSH-207ENST00000588269 COL18A1P39060 1754 aa16.23■□□□□ 0.19
PRKCSH-207ENST00000588269 RGPD5Q99666 1765 aa16.23■□□□□ 0.19
PRKCSH-207ENST00000588269 WDR17Q8IZU2 1322 aa16.22■□□□□ 0.19
PRKCSH-207ENST00000588269 SBF2Q86WG5 1849 aa16.22■□□□□ 0.19
PRKCSH-207ENST00000588269 AXIN2Q9Y2T1 843 aa16.22■□□□□ 0.19
PRKCSH-207ENST00000588269 NSD3Q9BZ95 1437 aa16.21■□□□□ 0.19
PRKCSH-207ENST00000588269 POLR3GLQ9BT43 218 aa16.21■□□□□ 0.19
PRKCSH-207ENST00000588269 CDCA7Q9BWT1 371 aaPredicted RBP16.21■□□□□ 0.19
PRKCSH-207ENST00000588269 PARD3Q8TEW0 1356 aa16.21■□□□□ 0.19
PRKCSH-207ENST00000588269 KIF20BQ96Q89 1820 aa16.21■□□□□ 0.19
PRKCSH-207ENST00000588269 LTN1O94822 1766 aa16.21■□□□□ 0.18
PRKCSH-207ENST00000588269 C11orf95C9JLR9 678 aaPredicted RBP16.2■□□□□ 0.18
PRKCSH-207ENST00000588269 ANO8Q9HCE9 1232 aaPredicted RBP16.2■□□□□ 0.18
PRKCSH-207ENST00000588269 RTL1A6NKG5 1358 aa16.2■□□□□ 0.18
PRKCSH-207ENST00000588269 CCDC7Q96M83 1385 aa16.2■□□□□ 0.18
PRKCSH-207ENST00000588269 WNK3Q9BYP7 1800 aa16.19■□□□□ 0.18
PRKCSH-207ENST00000588269 PDGFDQ9GZP0 370 aaPredicted RBP16.19■□□□□ 0.18
PRKCSH-207ENST00000588269 CGNL1Q0VF96 1302 aa16.19■□□□□ 0.18
PRKCSH-207ENST00000588269 NBPF14Q5TI25 921 aa16.18■□□□□ 0.18
PRKCSH-207ENST00000588269 OVOS2A0A0G2JMS6 1433 aa16.18■□□□□ 0.18
PRKCSH-207ENST00000588269 SMG6Q86US8 1419 aaKnown RBP16.18■□□□□ 0.18
PRKCSH-207ENST00000588269 ERBB3P21860 1342 aa16.18■□□□□ 0.18
PRKCSH-207ENST00000588269 FAM208AQ9UK61 1670 aaKnown RBP16.18■□□□□ 0.18
PRKCSH-207ENST00000588269 DDB1Q16531 1140 aa16.17■□□□□ 0.18
PRKCSH-207ENST00000588269 AMPHP49418 695 aa16.16■□□□□ 0.18
PRKCSH-207ENST00000588269 MARCH10Q8NA82 808 aaPredicted RBP16.16■□□□□ 0.18
PRKCSH-207ENST00000588269 CARD10Q9BWT7 1032 aa16.16■□□□□ 0.18
PRKCSH-207ENST00000588269 KIF24Q5T7B8 1368 aa16.15■□□□□ 0.18
PRKCSH-207ENST00000588269 FYB1O15117 783 aa16.14■□□□□ 0.17
PRKCSH-207ENST00000588269 PROM2Q8N271 834 aa16.14■□□□□ 0.17
PRKCSH-207ENST00000588269 GGNBP2Q9H3C7 697 aa16.14■□□□□ 0.17
PRKCSH-207ENST00000588269 PPP1R1BQ9UD71 204 aaPredicted RBP16.14■□□□□ 0.17
PRKCSH-207ENST00000588269 NSD2O96028 1365 aa16.13■□□□□ 0.17
PRKCSH-207ENST00000588269 KCNQ2O43526 872 aa16.13■□□□□ 0.17
PRKCSH-207ENST00000588269 ANKRD24Q8TF21 1146 aa16.13■□□□□ 0.17
PRKCSH-207ENST00000588269 IP6K1Q92551 441 aa16.13■□□□□ 0.17
PRKCSH-207ENST00000588269 SPON1Q9HCB6 807 aa16.13■□□□□ 0.17
PRKCSH-207ENST00000588269 NLRP2Q9NX02 1062 aa16.13■□□□□ 0.17
PRKCSH-207ENST00000588269 MAP3K19Q56UN5 1328 aa16.13■□□□□ 0.17
PRKCSH-207ENST00000588269 CASZ1Q86V15 1759 aa16.13■□□□□ 0.17
PRKCSH-207ENST00000588269 FLT4P35916 1363 aa16.12■□□□□ 0.17
PRKCSH-207ENST00000588269 RGPD3A6NKT7 1758 aaPredicted RBP16.11■□□□□ 0.17
PRKCSH-207ENST00000588269 RGPD4Q7Z3J3 1758 aa16.11■□□□□ 0.17
PRKCSH-207ENST00000588269 ZBTB7AO95365 584 aa16.11■□□□□ 0.17
PRKCSH-207ENST00000588269 YY1P25490 414 aa16.11■□□□□ 0.17
PRKCSH-207ENST00000588269 TNS2Q63HR2 1409 aa16.11■□□□□ 0.17
PRKCSH-207ENST00000588269 HOXC9P31274 260 aa16.1■□□□□ 0.17
PRKCSH-207ENST00000588269 BCL11BQ9C0K0 894 aaPredicted RBP16.1■□□□□ 0.17
PRKCSH-207ENST00000588269 PLSCR1O15162 318 aa16.09■□□□□ 0.17
PRKCSH-207ENST00000588269 CARD14Q9BXL6 1004 aa16.09■□□□□ 0.17
PRKCSH-207ENST00000588269 ANKRD26Q9UPS8 1709 aa16.08■□□□□ 0.17
PRKCSH-207ENST00000588269 IL2RBP14784 551 aa16.08■□□□□ 0.16
PRKCSH-207ENST00000588269 ACSBG1Q96GR2 724 aa16.08■□□□□ 0.16
PRKCSH-207ENST00000588269 ATF5Q9Y2D1 282 aaPredicted RBP16.08■□□□□ 0.16
PRKCSH-207ENST00000588269 EXOC5O00471 708 aa16.07■□□□□ 0.16
PRKCSH-207ENST00000588269 RRS1Q15050 365 aaKnown RBP16.07■□□□□ 0.16
PRKCSH-207ENST00000588269 KNSTRNQ9Y448 316 aa16.07■□□□□ 0.16
PRKCSH-207ENST00000588269 INSRP06213 1382 aa16.06■□□□□ 0.16
PRKCSH-207ENST00000588269 KIF7Q2M1P5 1343 aa16.06■□□□□ 0.16
PRKCSH-207ENST00000588269 TXNRD1Q16881 649 aa16.06■□□□□ 0.16
PRKCSH-207ENST00000588269 LTV1Q96GA3 475 aaPredicted RBP16.06■□□□□ 0.16
PRKCSH-207ENST00000588269 PANK3Q9H999 370 aa16.06■□□□□ 0.16
PRKCSH-207ENST00000588269 BCL9O00512 1426 aa16.05■□□□□ 0.16
PRKCSH-207ENST00000588269 PTGER2P43116 358 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms