RNA–Protein interactions for RNA: ENST00000588156.5

PIK3C3-208, Transcript of phosphatidylinositol 3-kinase catalytic subunit type 3, human

TSL 2

Gene PIK3C3, Length 733 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PIK3C3-208	ENST00000588156	LRRN4	Q8WUT4	740 aa		11.24	□□□□□ -0.61
PIK3C3-208	ENST00000588156	GPKOW	Q92917	476 aa	Predicted RBP eCLIP	11.24	□□□□□ -0.61
PIK3C3-208	ENST00000588156	RSPH6A	Q9H0K4	717 aa		11.24	□□□□□ -0.61
PIK3C3-208	ENST00000588156	ARHGAP9	Q9BRR9	750 aa		11.23	□□□□□ -0.61
PIK3C3-208	ENST00000588156	KRT76	Q01546	638 aa		11.22	□□□□□ -0.61
PIK3C3-208	ENST00000588156	PTS	Q03393	145 aa		11.22	□□□□□ -0.61
PIK3C3-208	ENST00000588156	PGPEP1	Q9NXJ5	209 aa		11.22	□□□□□ -0.61
PIK3C3-208	ENST00000588156	FBXO31	Q5XUX0	539 aa	Predicted RBP	11.21	□□□□□ -0.61
PIK3C3-208	ENST00000588156	PDXDC2P	Q6P474	469 aa		11.2	□□□□□ -0.62
PIK3C3-208	ENST00000588156		Q6ZVU0	165 aa		11.2	□□□□□ -0.62
PIK3C3-208	ENST00000588156	SLC10A4	Q96EP9	437 aa		11.2	□□□□□ -0.62
PIK3C3-208	ENST00000588156	CNTNAP3B	Q96NU0	1288 aa		11.2	□□□□□ -0.62
PIK3C3-208	ENST00000588156	KCTD15	Q96SI1	283 aa	Predicted RBP	11.2	□□□□□ -0.62
PIK3C3-208	ENST00000588156	CNTNAP3	Q9BZ76	1288 aa		11.2	□□□□□ -0.62
PIK3C3-208	ENST00000588156	FKBPL	Q9UIM3	349 aa		11.2	□□□□□ -0.62
PIK3C3-208	ENST00000588156	NR6A1	Q15406	480 aa		11.19	□□□□□ -0.62
PIK3C3-208	ENST00000588156	ZBTB33	Q86T24	672 aa		11.19	□□□□□ -0.62
PIK3C3-208	ENST00000588156	SPINT1	O43278	529 aa		11.18	□□□□□ -0.62
PIK3C3-208	ENST00000588156	AGBL1	Q96MI9	1066 aa		11.18	□□□□□ -0.62
PIK3C3-208	ENST00000588156	CCDC155	Q8N6L0	562 aa		11.17	□□□□□ -0.62
PIK3C3-208	ENST00000588156	RELB	Q01201	579 aa		11.16	□□□□□ -0.62
PIK3C3-208	ENST00000588156	INTS6L	Q5JSJ4	861 aa	Known RBP	11.16	□□□□□ -0.62
PIK3C3-208	ENST00000588156	ATP1B4	Q9UN42	357 aa	Predicted RBP	11.16	□□□□□ -0.62
PIK3C3-208	ENST00000588156	PROCA1	Q8NCQ7	364 aa	Predicted RBP	11.15	□□□□□ -0.62
PIK3C3-208	ENST00000588156	OCSTAMP	Q9BR26	566 aa		11.15	□□□□□ -0.62
PIK3C3-208	ENST00000588156	COL25A1	Q9BXS0	654 aa	Predicted RBP	11.15	□□□□□ -0.62
PIK3C3-208	ENST00000588156	CTSO	P43234	321 aa	Predicted RBP	11.14	□□□□□ -0.63
PIK3C3-208	ENST00000588156	DHX9	Q08211	1270 aa	Known RBP	11.14	□□□□□ -0.63
PIK3C3-208	ENST00000588156	CDV3	Q9UKY7	258 aa	Known RBP	11.14	□□□□□ -0.63
PIK3C3-208	ENST00000588156	KCNMA1	Q12791	1236 aa		11.13	□□□□□ -0.63
PIK3C3-208	ENST00000588156	SKIV2L	Q15477	1246 aa	Known RBP	11.13	□□□□□ -0.63
PIK3C3-208	ENST00000588156	INSM2	Q96T92	566 aa	Predicted RBP	11.13	□□□□□ -0.63
PIK3C3-208	ENST00000588156	SLC35F4	A4IF30	521 aa		11.12	□□□□□ -0.63
PIK3C3-208	ENST00000588156	GSK3A	P49840	483 aa		11.12	□□□□□ -0.63
PIK3C3-208	ENST00000588156	RAB15	P59190	212 aa		11.12	□□□□□ -0.63
PIK3C3-208	ENST00000588156	RNFT1	Q5M7Z0	435 aa		11.12	□□□□□ -0.63
PIK3C3-208	ENST00000588156	ADAM32	Q8TC27	787 aa		11.12	□□□□□ -0.63
PIK3C3-208	ENST00000588156	TMPRSS4	Q9NRS4	437 aa		11.12	□□□□□ -0.63
PIK3C3-208	ENST00000588156	CDC14C	A4D256	554 aa		11.11	□□□□□ -0.63
PIK3C3-208	ENST00000588156	AP1G2	O75843	785 aa		11.11	□□□□□ -0.63
PIK3C3-208	ENST00000588156	PTK2	Q05397	1052 aa		11.11	□□□□□ -0.63
PIK3C3-208	ENST00000588156	KCTD17	Q8N5Z5	321 aa		11.11	□□□□□ -0.63
PIK3C3-208	ENST00000588156	EPS8L1	Q8TE68	723 aa		11.11	□□□□□ -0.63
PIK3C3-208	ENST00000588156	NANOS1	Q8WY41	292 aa	Known RBP	11.11	□□□□□ -0.63
PIK3C3-208	ENST00000588156	ZNF395	Q9H8N7	513 aa	Predicted RBP	11.11	□□□□□ -0.63
PIK3C3-208	ENST00000588156	GPBP1L1	Q9HC44	474 aa	Predicted RBP	11.11	□□□□□ -0.63
PIK3C3-208	ENST00000588156	POLM	Q9NP87	494 aa	Predicted RBP	11.11	□□□□□ -0.63
PIK3C3-208	ENST00000588156	ZC3H4	Q9UPT8	1303 aa	Known RBP	11.1	□□□□□ -0.63
PIK3C3-208	ENST00000588156	SH3D19	Q5HYK7	790 aa		11.1	□□□□□ -0.63
PIK3C3-208	ENST00000588156	VWA5B2	Q8N398	1253 aa		11.1	□□□□□ -0.63
PIK3C3-208	ENST00000588156	ADAMTS8	Q9UP79	889 aa		11.1	□□□□□ -0.63
PIK3C3-208	ENST00000588156	GNL3	Q9BVP2	549 aa	Known RBP eCLIP	11.09	□□□□□ -0.63
PIK3C3-208	ENST00000588156	ITGA6	P23229	1130 aa		11.08	□□□□□ -0.64
PIK3C3-208	ENST00000588156	FAM117A	Q9C073	453 aa		11.08	□□□□□ -0.64
PIK3C3-208	ENST00000588156	ZNF385C	Q66K41	422 aa	Predicted RBP	11.07	□□□□□ -0.64
PIK3C3-208	ENST00000588156	PPP2R2D	Q66LE6	453 aa		11.07	□□□□□ -0.64
PIK3C3-208	ENST00000588156	SVOP	Q8N4V2	548 aa		11.07	□□□□□ -0.64
PIK3C3-208	ENST00000588156	ZNF784	Q8NCA9	323 aa	Predicted RBP	11.07	□□□□□ -0.64
PIK3C3-208	ENST00000588156	KDM4C	Q9H3R0	1056 aa		11.07	□□□□□ -0.64
PIK3C3-208	ENST00000588156	RNF217	Q8TC41	542 aa		11.06	□□□□□ -0.64
PIK3C3-208	ENST00000588156	WHAMM	Q8TF30	809 aa		11.06	□□□□□ -0.64
PIK3C3-208	ENST00000588156	HMX1	Q9NP08	348 aa	Predicted RBP	11.06	□□□□□ -0.64
PIK3C3-208	ENST00000588156	SV2A	Q7L0J3	742 aa		11.05	□□□□□ -0.64
PIK3C3-208	ENST00000588156	TMEM151A	Q8N4L1	468 aa		11.05	□□□□□ -0.64
PIK3C3-208	ENST00000588156	GPSM3	Q9Y4H4	160 aa		11.05	□□□□□ -0.64
PIK3C3-208	ENST00000588156	GDF11	O95390	407 aa		11.04	□□□□□ -0.64
PIK3C3-208	ENST00000588156	ADD1	P35611	737 aa	Known RBP	11.04	□□□□□ -0.64
PIK3C3-208	ENST00000588156	RASSF7	Q02833	373 aa		11.04	□□□□□ -0.64
PIK3C3-208	ENST00000588156	NBPF20	Q3BBV1	942 aa		11.04	□□□□□ -0.64
PIK3C3-208	ENST00000588156	LOC100996750	A0A140TA64	210 aa		11.03	□□□□□ -0.64
PIK3C3-208	ENST00000588156	ERVH48-1	M5A8F1	160 aa		11.03	□□□□□ -0.64
PIK3C3-208	ENST00000588156	DZIP3	Q86Y13	1208 aa	Known RBP	11.03	□□□□□ -0.64
PIK3C3-208	ENST00000588156	KRTAP4-6	Q9BYQ5	205 aa		11.03	□□□□□ -0.64
PIK3C3-208	ENST00000588156	SENP3-EIF4A1	A0A087X0R7	540 aa		11.02	□□□□□ -0.65
PIK3C3-208	ENST00000588156	ADH1A	P07327	375 aa		11.02	□□□□□ -0.65
PIK3C3-208	ENST00000588156	USP17L8	P0C7I0	530 aa		11.02	□□□□□ -0.65
PIK3C3-208	ENST00000588156	SUZ12	Q15022	739 aa	Known RBP	11.02	□□□□□ -0.65
PIK3C3-208	ENST00000588156	FOXD4L5	Q5VV16	416 aa	Predicted RBP	11.02	□□□□□ -0.65
PIK3C3-208	ENST00000588156	DDRGK1	Q96HY6	314 aa		11.02	□□□□□ -0.65
PIK3C3-208	ENST00000588156	LILRA1	O75019	489 aa		11.01	□□□□□ -0.65
PIK3C3-208	ENST00000588156	RNF225	M0QZC1	329 aa	Predicted RBP	11	□□□□□ -0.65
PIK3C3-208	ENST00000588156	KDF1	Q8NAX2	398 aa	Predicted RBP	11	□□□□□ -0.65
PIK3C3-208	ENST00000588156	SLURP2	P0DP57	97 aa		10.99	□□□□□ -0.65
PIK3C3-208	ENST00000588156	PTGIR	P43119	386 aa		10.99	□□□□□ -0.65
PIK3C3-208	ENST00000588156	PNMA1	Q8ND90	353 aa		10.99	□□□□□ -0.65
PIK3C3-208	ENST00000588156	CYLD	Q9NQC7	956 aa		10.98	□□□□□ -0.65
PIK3C3-208	ENST00000588156	ARHGEF15	O94989	841 aa		10.97	□□□□□ -0.65
PIK3C3-208	ENST00000588156	CUEDC1	Q9NWM3	386 aa	Predicted RBP	10.97	□□□□□ -0.65
PIK3C3-208	ENST00000588156	ESPN	B1AK53	854 aa		10.96	□□□□□ -0.65
PIK3C3-208	ENST00000588156	LYSMD3	Q7Z3D4	306 aa		10.96	□□□□□ -0.65
PIK3C3-208	ENST00000588156	ADAMTS2	O95450	1211 aa		10.95	□□□□□ -0.66
PIK3C3-208	ENST00000588156	RHOQ	P17081	205 aa		10.95	□□□□□ -0.66
PIK3C3-208	ENST00000588156	IRS1	P35568	1242 aa		10.95	□□□□□ -0.66
PIK3C3-208	ENST00000588156	RFC5	P40937	340 aa		10.95	□□□□□ -0.66
PIK3C3-208	ENST00000588156	PRICKLE2	Q7Z3G6	844 aa		10.95	□□□□□ -0.66
PIK3C3-208	ENST00000588156	LYPD4	Q6UWN0	246 aa		10.94	□□□□□ -0.66
PIK3C3-208	ENST00000588156	MARS	P56192	900 aa	Known RBP	10.93	□□□□□ -0.66
PIK3C3-208	ENST00000588156	GAS6	Q14393	721 aa		10.92	□□□□□ -0.66
PIK3C3-208	ENST00000588156	TRIM34	Q9BYJ4	488 aa		10.92	□□□□□ -0.66
PIK3C3-208	ENST00000588156	GIGYF1	O75420	1035 aa	Predicted RBP	10.9	□□□□□ -0.66

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