RNA–Protein interactions for RNA: ENST00000588156.5

PIK3C3-208, Transcript of phosphatidylinositol 3-kinase catalytic subunit type 3, humanhuman

TSL 2

Gene PIK3C3, Length 733 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PIK3C3-208ENST00000588156 AEBP2Q6ZN18 517 aaPredicted RBP33.35■■■□□ 2.93
PIK3C3-208ENST00000588156 CHIC1Q5VXU3 224 aa31.58■■■□□ 2.65
PIK3C3-208ENST00000588156 SENP3Q9H4L4 574 aaPredicted RBP28.38■■■□□ 2.13
PIK3C3-208ENST00000588156 PHF23Q9BUL5 403 aaPredicted RBP28.06■■■□□ 2.08
PIK3C3-208ENST00000588156 FOXD1Q16676 465 aa26.52■■□□□ 1.84
PIK3C3-208ENST00000588156 PLPPR3Q6T4P5 718 aa25.2■■□□□ 1.62
PIK3C3-208ENST00000588156 PPP6R1Q9UPN7 881 aa24.79■■□□□ 1.56
PIK3C3-208ENST00000588156 PIAS4Q8N2W9 510 aaPredicted RBP24.78■■□□□ 1.56
PIK3C3-208ENST00000588156 MSH5O43196 834 aa24.77■■□□□ 1.56
PIK3C3-208ENST00000588156 ADRA2BP18089 450 aa24.72■■□□□ 1.55
PIK3C3-208ENST00000588156 POTEDQ86YR6 584 aa24.31■■□□□ 1.48
PIK3C3-208ENST00000588156 MAPK8IP2Q13387 824 aaPredicted RBP22.74■■□□□ 1.23
PIK3C3-208ENST00000588156 SCAF1Q9H7N4 1312 aaKnown RBP22.52■■□□□ 1.2
PIK3C3-208ENST00000588156 DMRT2Q9Y5R5 561 aa22.51■■□□□ 1.19
PIK3C3-208ENST00000588156 PPP4R3CPQ6ZMV5 832 aa22.12■■□□□ 1.13
PIK3C3-208ENST00000588156 DCAF8L1A6NGE4 600 aa21.69■■□□□ 1.06
PIK3C3-208ENST00000588156 CNKSR2Q8WXI2 1034 aa21.68■■□□□ 1.06
PIK3C3-208ENST00000588156 HOXD11P31277 338 aaPredicted RBP21.65■■□□□ 1.06
PIK3C3-208ENST00000588156 RNF216Q9NWF9 866 aaPredicted RBP21.49■■□□□ 1.03
PIK3C3-208ENST00000588156 CACNB1Q02641 598 aaPredicted RBP21.35■■□□□ 1.01
PIK3C3-208ENST00000588156 NCBP3Q53F19 620 aaKnown RBP21.21■□□□□ 0.99
PIK3C3-208ENST00000588156 RNF39Q9H2S5 420 aa21.15■□□□□ 0.98
PIK3C3-208ENST00000588156 NPM3O75607 178 aaKnown RBP20.96■□□□□ 0.95
PIK3C3-208ENST00000588156 DNAJC5BQ9UF47 199 aa20.82■□□□□ 0.92
PIK3C3-208ENST00000588156 C1QBPQ07021 282 aaKnown RBP20.81■□□□□ 0.92
PIK3C3-208ENST00000588156 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.69■□□□□ 0.9
PIK3C3-208ENST00000588156 KCNA4P22459 653 aa20.55■□□□□ 0.88
PIK3C3-208ENST00000588156 U3KPZ7 1027 aaPredicted RBP20.25■□□□□ 0.83
PIK3C3-208ENST00000588156 SLC4A2P04920 1241 aa20.03■□□□□ 0.8
PIK3C3-208ENST00000588156 SPINK5Q9NQ38 1064 aaPredicted RBP20■□□□□ 0.79
PIK3C3-208ENST00000588156 CAPN15O75808 1086 aa19.96■□□□□ 0.79
PIK3C3-208ENST00000588156 DSG3P32926 999 aa19.82■□□□□ 0.76
PIK3C3-208ENST00000588156 TRHP20396 242 aaPredicted RBP19.65■□□□□ 0.74
PIK3C3-208ENST00000588156 APLP2Q06481 763 aa19.59■□□□□ 0.73
PIK3C3-208ENST00000588156 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.57■□□□□ 0.72
PIK3C3-208ENST00000588156 HNRNPUL2Q1KMD3 747 aaKnown RBP19.57■□□□□ 0.72
PIK3C3-208ENST00000588156 ABCB7O75027 752 aa19.53■□□□□ 0.72
PIK3C3-208ENST00000588156 ZNF219Q9P2Y4 722 aaPredicted RBP19.52■□□□□ 0.72
PIK3C3-208ENST00000588156 SAMD1Q6SPF0 538 aaPredicted RBP19.48■□□□□ 0.71
PIK3C3-208ENST00000588156 SLC4A1APQ9BWU0 796 aaKnown RBP19.37■□□□□ 0.69
PIK3C3-208ENST00000588156 MYCNP04198 464 aaPredicted RBP19.35■□□□□ 0.69
PIK3C3-208ENST00000588156 FOXD4L1Q9NU39 408 aa19.14■□□□□ 0.65
PIK3C3-208ENST00000588156 POLA2Q14181 598 aa19.08■□□□□ 0.64
PIK3C3-208ENST00000588156 POTEHQ6S545 545 aa19.04■□□□□ 0.64
PIK3C3-208ENST00000588156 ATF5Q9Y2D1 282 aaPredicted RBP18.99■□□□□ 0.63
PIK3C3-208ENST00000588156 ZBTB22O15209 634 aa18.9■□□□□ 0.62
PIK3C3-208ENST00000588156 RBM42Q9BTD8 480 aaKnown RBP18.86■□□□□ 0.61
PIK3C3-208ENST00000588156 ZBTB12Q9Y330 459 aaPredicted RBP18.6■□□□□ 0.57
PIK3C3-208ENST00000588156 CHRDL2Q6WN34 429 aa18.51■□□□□ 0.55
PIK3C3-208ENST00000588156 ATXN8OSP0DMR3 200 aa18.49■□□□□ 0.55
PIK3C3-208ENST00000588156 OSCARQ8IYS5 282 aa18.49■□□□□ 0.55
PIK3C3-208ENST00000588156 AKT1S1Q96B36 256 aa18.43■□□□□ 0.54
PIK3C3-208ENST00000588156 REM2Q8IYK8 340 aaPredicted RBP18.3■□□□□ 0.52
PIK3C3-208ENST00000588156 FBLN2P98095 1184 aa18.18■□□□□ 0.5
PIK3C3-208ENST00000588156 PITPNM1O00562 1244 aa18.12■□□□□ 0.49
PIK3C3-208ENST00000588156 MKRN4PQ13434 485 aaPredicted RBP18.08■□□□□ 0.48
PIK3C3-208ENST00000588156 PIP4P2Q8N4L2 257 aa18.08■□□□□ 0.48
PIK3C3-208ENST00000588156 SPDYE2BA6NHP3 402 aa18.05■□□□□ 0.48
PIK3C3-208ENST00000588156 SPDYE6P0CI01 402 aa18.05■□□□□ 0.48
PIK3C3-208ENST00000588156 SPDYE2Q495Y8 402 aa18.05■□□□□ 0.48
PIK3C3-208ENST00000588156 CSRNP3Q8WYN3 585 aa17.97■□□□□ 0.47
PIK3C3-208ENST00000588156 FXR2P51116 673 aaKnown RBP eCLIP17.93■□□□□ 0.46
PIK3C3-208ENST00000588156 ZNF692Q9BU19 519 aaPredicted RBP17.88■□□□□ 0.45
PIK3C3-208ENST00000588156 CLEC11AQ9Y240 323 aa17.82■□□□□ 0.44
PIK3C3-208ENST00000588156 SP7Q8TDD2 431 aaPredicted RBP17.81■□□□□ 0.44
PIK3C3-208ENST00000588156 SSUH2Q9Y2M2 353 aa17.81■□□□□ 0.44
PIK3C3-208ENST00000588156 HAX1O00165 279 aa17.78■□□□□ 0.44
PIK3C3-208ENST00000588156 EHMT2Q96KQ7 1210 aa17.78■□□□□ 0.44
PIK3C3-208ENST00000588156 SPDYE1Q8NFV5 336 aaPredicted RBP17.76■□□□□ 0.43
PIK3C3-208ENST00000588156 PRKAR2AP13861 404 aaKnown RBP17.65■□□□□ 0.42
PIK3C3-208ENST00000588156 PABPN1Q86U42 306 aaKnown RBP eCLIP17.63■□□□□ 0.41
PIK3C3-208ENST00000588156 EVX2Q03828 476 aa17.58■□□□□ 0.4
PIK3C3-208ENST00000588156 CHADLQ6NUI6 762 aa17.5■□□□□ 0.39
PIK3C3-208ENST00000588156 PRR29P0C7W0 189 aa17.47■□□□□ 0.39
PIK3C3-208ENST00000588156 C19orf67A6NJJ6 358 aa17.36■□□□□ 0.37
PIK3C3-208ENST00000588156 SPDYE4A6NLX3 237 aa17.2■□□□□ 0.34
PIK3C3-208ENST00000588156 FARP1Q9Y4F1 1045 aaPredicted RBP17.17■□□□□ 0.34
PIK3C3-208ENST00000588156 GABBR2O75899 941 aa17.14■□□□□ 0.33
PIK3C3-208ENST00000588156 CD44P16070 742 aaKnown RBP17.09■□□□□ 0.33
PIK3C3-208ENST00000588156 STAG3Q9UJ98 1225 aa17.06■□□□□ 0.32
PIK3C3-208ENST00000588156 CREBZFQ9NS37 354 aa17.03■□□□□ 0.32
PIK3C3-208ENST00000588156 ZRANB1Q9UGI0 708 aa16.86■□□□□ 0.29
PIK3C3-208ENST00000588156 POTEIP0CG38 1075 aa16.8■□□□□ 0.28
PIK3C3-208ENST00000588156 ZNF579Q8NAF0 562 aaKnown RBP16.78■□□□□ 0.28
PIK3C3-208ENST00000588156 CLCN6P51797 869 aa16.73■□□□□ 0.27
PIK3C3-208ENST00000588156 LHX8Q68G74 356 aa16.72■□□□□ 0.27
PIK3C3-208ENST00000588156 MNX1P50219 401 aaPredicted RBP16.71■□□□□ 0.27
PIK3C3-208ENST00000588156 PROM2Q8N271 834 aa16.71■□□□□ 0.27
PIK3C3-208ENST00000588156 NPM1P06748 294 aaKnown RBP eCLIP16.67■□□□□ 0.26
PIK3C3-208ENST00000588156 DCBLD2Q96PD2 775 aa16.67■□□□□ 0.26
PIK3C3-208ENST00000588156 PAK3O75914 559 aaPredicted RBP16.66■□□□□ 0.26
PIK3C3-208ENST00000588156 GALR2O43603 387 aaPredicted RBP16.64■□□□□ 0.25
PIK3C3-208ENST00000588156 PHF12Q96QT6 1004 aa16.64■□□□□ 0.25
PIK3C3-208ENST00000588156 TSPYL2Q9H2G4 693 aaPredicted RBP16.46■□□□□ 0.23
PIK3C3-208ENST00000588156 MIER1Q8N108 512 aa16.43■□□□□ 0.22
PIK3C3-208ENST00000588156 MS4A3Q96HJ5 214 aa16.39■□□□□ 0.21
PIK3C3-208ENST00000588156 PLEKHG5O94827 1062 aa16.36■□□□□ 0.21
PIK3C3-208ENST00000588156 FKBP8Q14318 412 aa16.34■□□□□ 0.21
PIK3C3-208ENST00000588156 PELP1Q8IZL8 1130 aaKnown RBP16.33■□□□□ 0.2
PIK3C3-208ENST00000588156 CCDC61Q9Y6R9 512 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 84.4 ms