RNA–Protein interactions for RNA: ENST00000588071.5

CCDC130-208, Transcript of coiled-coil domain containing 130, humanhuman

TSL 5

Gene CCDC130, Length 1,157 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC130-208ENST00000588071 RGPD5Q99666 1765 aa18.93■□□□□ 0.62
CCDC130-208ENST00000588071 HSP90AB2PQ58FF8 381 aa18.93■□□□□ 0.62
CCDC130-208ENST00000588071 SMG6Q86US8 1419 aaKnown RBP18.92■□□□□ 0.62
CCDC130-208ENST00000588071 FAM83GA6ND36 823 aa18.92■□□□□ 0.62
CCDC130-208ENST00000588071 DIAPH1O60610 1272 aaKnown RBP18.92■□□□□ 0.62
CCDC130-208ENST00000588071 LTV1Q96GA3 475 aaPredicted RBP18.92■□□□□ 0.62
CCDC130-208ENST00000588071 RTL1A6NKG5 1358 aa18.92■□□□□ 0.62
CCDC130-208ENST00000588071 CDK12Q9NYV4 1490 aaPredicted RBP18.91■□□□□ 0.62
CCDC130-208ENST00000588071 NUDCQ9Y266 331 aa18.91■□□□□ 0.62
CCDC130-208ENST00000588071 MEX3CQ5U5Q3 659 aaKnown RBP18.9■□□□□ 0.62
CCDC130-208ENST00000588071 AXIN2Q9Y2T1 843 aa18.9■□□□□ 0.62
CCDC130-208ENST00000588071 COL18A1P39060 1754 aa18.9■□□□□ 0.62
CCDC130-208ENST00000588071 INSRP06213 1382 aa18.9■□□□□ 0.62
CCDC130-208ENST00000588071 EVA1CP58658 441 aa18.89■□□□□ 0.61
CCDC130-208ENST00000588071 WDR43Q15061 677 aaKnown RBP eCLIP18.88■□□□□ 0.61
CCDC130-208ENST00000588071 COL14A1Q05707 1796 aaKnown RBP18.88■□□□□ 0.61
CCDC130-208ENST00000588071 U2SURPO15042 1029 aaKnown RBP18.87■□□□□ 0.61
CCDC130-208ENST00000588071 CSB-PGBD3P0DP91 1061 aa18.87■□□□□ 0.61
CCDC130-208ENST00000588071 IL13P35225 146 aa18.87■□□□□ 0.61
CCDC130-208ENST00000588071 BLMP54132 1417 aaPredicted RBP18.87■□□□□ 0.61
CCDC130-208ENST00000588071 EIF4A2Q14240 407 aaKnown RBP18.87■□□□□ 0.61
CCDC130-208ENST00000588071 NGLY1Q96IV0 654 aa18.87■□□□□ 0.61
CCDC130-208ENST00000588071 FAM9BQ8IZU0 186 aa18.86■□□□□ 0.61
CCDC130-208ENST00000588071 ANKRD24Q8TF21 1146 aa18.86■□□□□ 0.61
CCDC130-208ENST00000588071 C8orf37Q96NL8 207 aa18.86■□□□□ 0.61
CCDC130-208ENST00000588071 BTG4Q9NY30 223 aa18.86■□□□□ 0.61
CCDC130-208ENST00000588071 ABCC6O95255 1503 aa18.85■□□□□ 0.61
CCDC130-208ENST00000588071 PNISRQ8TF01 805 aaKnown RBP18.85■□□□□ 0.61
CCDC130-208ENST00000588071 COL3A1P02461 1466 aaPredicted RBP18.84■□□□□ 0.61
CCDC130-208ENST00000588071 U2AF1L5P0DN76 240 aaPredicted RBP18.84■□□□□ 0.61
CCDC130-208ENST00000588071 U2AF1Q01081 240 aaKnown RBP eCLIP18.84■□□□□ 0.61
CCDC130-208ENST00000588071 STRN4Q9NRL3 753 aa18.84■□□□□ 0.61
CCDC130-208ENST00000588071 LMO7Q8WWI1 1683 aa18.83■□□□□ 0.61
CCDC130-208ENST00000588071 CAMTA1Q9Y6Y1 1673 aa18.83■□□□□ 0.61
CCDC130-208ENST00000588071 LRP6O75581 1613 aa18.83■□□□□ 0.61
CCDC130-208ENST00000588071 RGPD2P0DJD1 1756 aa18.83■□□□□ 0.6
CCDC130-208ENST00000588071 PLCH1Q4KWH8 1693 aa18.82■□□□□ 0.6
CCDC130-208ENST00000588071 ERBB3P21860 1342 aa18.81■□□□□ 0.6
CCDC130-208ENST00000588071 TOM1L2Q6ZVM7 507 aa18.81■□□□□ 0.6
CCDC130-208ENST00000588071 EYA1Q99502 592 aa18.81■□□□□ 0.6
CCDC130-208ENST00000588071 NLRP2Q9NX02 1062 aa18.81■□□□□ 0.6
CCDC130-208ENST00000588071 ADAMTS8Q9UP79 889 aa18.8■□□□□ 0.6
CCDC130-208ENST00000588071 NWD2Q9ULI1 1742 aa18.8■□□□□ 0.6
CCDC130-208ENST00000588071 COL5A2P05997 1499 aaPredicted RBP18.79■□□□□ 0.6
CCDC130-208ENST00000588071 WDR17Q8IZU2 1322 aa18.78■□□□□ 0.6
CCDC130-208ENST00000588071 HMOX1P09601 288 aa18.78■□□□□ 0.6
CCDC130-208ENST00000588071 NBPF6Q5VWK0 638 aa18.78■□□□□ 0.6
CCDC130-208ENST00000588071 SULT6B1Q6IMI4 303 aa18.78■□□□□ 0.6
CCDC130-208ENST00000588071 LARP1Q6PKG0 1096 aaKnown RBP18.78■□□□□ 0.6
CCDC130-208ENST00000588071 FNBP4Q8N3X1 1017 aaPredicted RBP18.78■□□□□ 0.6
CCDC130-208ENST00000588071 NBPF4Q96M43 638 aa18.78■□□□□ 0.6
CCDC130-208ENST00000588071 PNNQ9H307 717 aaKnown RBP18.78■□□□□ 0.6
CCDC130-208ENST00000588071 FAM208AQ9UK61 1670 aaKnown RBP18.77■□□□□ 0.6
CCDC130-208ENST00000588071 ILDR1Q86SU0 546 aaPredicted RBP18.77■□□□□ 0.6
CCDC130-208ENST00000588071 UNC5CLQ8IV45 518 aa18.77■□□□□ 0.6
CCDC130-208ENST00000588071 USHBP1Q8N6Y0 703 aa18.77■□□□□ 0.6
CCDC130-208ENST00000588071 USP21Q9UK80 565 aa18.77■□□□□ 0.6
CCDC130-208ENST00000588071 SLIT2O94813 1529 aa18.77■□□□□ 0.6
CCDC130-208ENST00000588071 FCHSD2O94868 740 aa18.76■□□□□ 0.59
CCDC130-208ENST00000588071 RGPD1P0DJD0 1748 aa18.76■□□□□ 0.59
CCDC130-208ENST00000588071 IGSF1Q8N6C5 1336 aa18.75■□□□□ 0.59
CCDC130-208ENST00000588071 NEFMP07197 916 aa18.75■□□□□ 0.59
CCDC130-208ENST00000588071 CCDC9Q9Y3X0 531 aaKnown RBP18.75■□□□□ 0.59
CCDC130-208ENST00000588071 AFF2P51816 1311 aa18.74■□□□□ 0.59
CCDC130-208ENST00000588071 NRAPQ86VF7 1730 aa18.74■□□□□ 0.59
CCDC130-208ENST00000588071 AEBP1Q8IUX7 1158 aa18.74■□□□□ 0.59
CCDC130-208ENST00000588071 CARD10Q9BWT7 1032 aa18.74■□□□□ 0.59
CCDC130-208ENST00000588071 USP35Q9P2H5 1018 aa18.74■□□□□ 0.59
CCDC130-208ENST00000588071 CCDC146Q8IYE0 955 aa18.73■□□□□ 0.59
CCDC130-208ENST00000588071 CRB1P82279 1406 aa18.73■□□□□ 0.59
CCDC130-208ENST00000588071 PRKAR2BP31323 418 aa18.72■□□□□ 0.59
CCDC130-208ENST00000588071 RUNDC1Q96C34 613 aa18.72■□□□□ 0.59
CCDC130-208ENST00000588071 RSPH6AQ9H0K4 717 aa18.72■□□□□ 0.59
CCDC130-208ENST00000588071 BCL9LQ86UU0 1499 aa18.71■□□□□ 0.59
CCDC130-208ENST00000588071 VPS72Q15906 364 aa18.7■□□□□ 0.58
CCDC130-208ENST00000588071 RAPGEF4Q8WZA2 1011 aa18.7■□□□□ 0.58
CCDC130-208ENST00000588071 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.7■□□□□ 0.58
CCDC130-208ENST00000588071 MAPK8IP3Q9UPT6 1336 aa18.7■□□□□ 0.58
CCDC130-208ENST00000588071 TRPC5Q9UL62 973 aaPredicted RBP18.69■□□□□ 0.58
CCDC130-208ENST00000588071 KDRP35968 1356 aa18.68■□□□□ 0.58
CCDC130-208ENST00000588071 TATP17735 454 aaPredicted RBP18.68■□□□□ 0.58
CCDC130-208ENST00000588071 ZNF772Q68DY9 489 aaPredicted RBP18.68■□□□□ 0.58
CCDC130-208ENST00000588071 TCP11L2Q8N4U5 519 aa18.68■□□□□ 0.58
CCDC130-208ENST00000588071 PLEKHF1Q96S99 279 aa18.68■□□□□ 0.58
CCDC130-208ENST00000588071 QTRT2Q9H974 415 aaKnown RBP18.68■□□□□ 0.58
CCDC130-208ENST00000588071 SPATA31A1Q5TZJ5 1347 aa18.68■□□□□ 0.58
CCDC130-208ENST00000588071 SPATA31A5Q5VU36 1347 aa18.68■□□□□ 0.58
CCDC130-208ENST00000588071 SPATA31A7Q8IWB4 1347 aa18.68■□□□□ 0.58
CCDC130-208ENST00000588071 THRAP3Q9Y2W1 955 aaKnown RBP18.67■□□□□ 0.58
CCDC130-208ENST00000588071 IL2RBP14784 551 aa18.66■□□□□ 0.58
CCDC130-208ENST00000588071 PHACTR3Q96KR7 559 aa18.66■□□□□ 0.58
CCDC130-208ENST00000588071 NCAPD2Q15021 1401 aa18.66■□□□□ 0.58
CCDC130-208ENST00000588071 PLEKHO1Q53GL0 409 aaPredicted RBP18.65■□□□□ 0.58
CCDC130-208ENST00000588071 PHF23Q9BUL5 403 aaPredicted RBP18.65■□□□□ 0.58
CCDC130-208ENST00000588071 SENP3-EIF4A1A0A087X0R7 540 aa18.64■□□□□ 0.57
CCDC130-208ENST00000588071 APAF1O14727 1248 aa18.64■□□□□ 0.57
CCDC130-208ENST00000588071 GJD4Q96KN9 370 aaPredicted RBP18.64■□□□□ 0.57
CCDC130-208ENST00000588071 NEUROD2Q15784 382 aa18.63■□□□□ 0.57
CCDC130-208ENST00000588071 AMOTQ4VCS5 1084 aa18.63■□□□□ 0.57
CCDC130-208ENST00000588071 YTHDC1Q96MU7 727 aaKnown RBP18.63■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms