RNA–Protein interactions for RNA: ENST00000588021.5

RFX2-210, Transcript of regulatory factor X2, humanhuman

TSL 3

Gene RFX2, Length 1,314 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX2-210ENST00000588021 CAMTA1Q9Y6Y1 1673 aa21.73■■□□□ 1.07
RFX2-210ENST00000588021 STRN4Q9NRL3 753 aa21.72■■□□□ 1.07
RFX2-210ENST00000588021 CCDC9Q9Y3X0 531 aaKnown RBP21.72■■□□□ 1.07
RFX2-210ENST00000588021 COL18A1P39060 1754 aa21.72■■□□□ 1.07
RFX2-210ENST00000588021 ABCC6O95255 1503 aa21.71■■□□□ 1.07
RFX2-210ENST00000588021 FBLN1P23142 703 aa21.7■■□□□ 1.06
RFX2-210ENST00000588021 AMER1Q5JTC6 1135 aaPredicted RBP21.7■■□□□ 1.06
RFX2-210ENST00000588021 AMPHP49418 695 aa21.69■■□□□ 1.06
RFX2-210ENST00000588021 RRS1Q15050 365 aaKnown RBP21.69■■□□□ 1.06
RFX2-210ENST00000588021 AXIN2Q9Y2T1 843 aa21.69■■□□□ 1.06
RFX2-210ENST00000588021 MAP3K19Q56UN5 1328 aa21.69■■□□□ 1.06
RFX2-210ENST00000588021 RGPD5Q99666 1765 aa21.68■■□□□ 1.06
RFX2-210ENST00000588021 ONECUT3O60422 494 aaPredicted RBP21.68■■□□□ 1.06
RFX2-210ENST00000588021 MORC1Q86VD1 984 aa21.68■■□□□ 1.06
RFX2-210ENST00000588021 RGS12O14924 1447 aa21.68■■□□□ 1.06
RFX2-210ENST00000588021 COL5A2P05997 1499 aaPredicted RBP21.68■■□□□ 1.06
RFX2-210ENST00000588021 TNNT2P45379 298 aaPredicted RBP21.67■■□□□ 1.06
RFX2-210ENST00000588021 IP6K1Q92551 441 aa21.67■■□□□ 1.06
RFX2-210ENST00000588021 CC2D1BQ5T0F9 858 aaKnown RBP21.66■■□□□ 1.06
RFX2-210ENST00000588021 LARP1Q6PKG0 1096 aaKnown RBP21.65■■□□□ 1.06
RFX2-210ENST00000588021 NPC1L1Q9UHC9 1359 aa21.65■■□□□ 1.06
RFX2-210ENST00000588021 BLMP54132 1417 aaPredicted RBP21.64■■□□□ 1.06
RFX2-210ENST00000588021 ZNF316A6NFI3 1004 aaPredicted RBP21.64■■□□□ 1.05
RFX2-210ENST00000588021 CSB-PGBD3P0DP91 1061 aa21.64■■□□□ 1.05
RFX2-210ENST00000588021 HOXC9P31274 260 aa21.64■■□□□ 1.05
RFX2-210ENST00000588021 DDX10Q13206 875 aaKnown RBP21.64■■□□□ 1.05
RFX2-210ENST00000588021 MAP2P11137 1827 aaKnown RBP21.64■■□□□ 1.05
RFX2-210ENST00000588021 SPATA31A5Q5VU36 1347 aa21.64■■□□□ 1.05
RFX2-210ENST00000588021 SPATA31A7Q8IWB4 1347 aa21.64■■□□□ 1.05
RFX2-210ENST00000588021 RTL1A6NKG5 1358 aa21.64■■□□□ 1.05
RFX2-210ENST00000588021 GLI3P10071 1580 aa21.63■■□□□ 1.05
RFX2-210ENST00000588021 CNGB1Q14028 1251 aaPredicted RBP21.62■■□□□ 1.05
RFX2-210ENST00000588021 TOM1L2Q6ZVM7 507 aa21.62■■□□□ 1.05
RFX2-210ENST00000588021 EMILIN1Q9Y6C2 1016 aa21.62■■□□□ 1.05
RFX2-210ENST00000588021 SPATA31A1Q5TZJ5 1347 aa21.62■■□□□ 1.05
RFX2-210ENST00000588021 WDR17Q8IZU2 1322 aa21.62■■□□□ 1.05
RFX2-210ENST00000588021 KIF24Q5T7B8 1368 aa21.62■■□□□ 1.05
RFX2-210ENST00000588021 PPM1GO15355 546 aaPredicted RBP21.61■■□□□ 1.05
RFX2-210ENST00000588021 ANKRD24Q8TF21 1146 aa21.61■■□□□ 1.05
RFX2-210ENST00000588021 USP35Q9P2H5 1018 aa21.61■■□□□ 1.05
RFX2-210ENST00000588021 FLT4P35916 1363 aa21.61■■□□□ 1.05
RFX2-210ENST00000588021 CRB1P82279 1406 aa21.61■■□□□ 1.05
RFX2-210ENST00000588021 POLKQ9UBT6 870 aa21.6■■□□□ 1.05
RFX2-210ENST00000588021 ERBB3P21860 1342 aa21.6■■□□□ 1.05
RFX2-210ENST00000588021 LTV1Q96GA3 475 aaPredicted RBP21.59■■□□□ 1.05
RFX2-210ENST00000588021 PEAK1Q9H792 1746 aa21.59■■□□□ 1.05
RFX2-210ENST00000588021 TCP11L2Q8N4U5 519 aa21.58■■□□□ 1.05
RFX2-210ENST00000588021 FAM98CQ17RN3 349 aaKnown RBP21.57■■□□□ 1.04
RFX2-210ENST00000588021 THRAP3Q9Y2W1 955 aaKnown RBP21.57■■□□□ 1.04
RFX2-210ENST00000588021 INSRP06213 1382 aa21.57■■□□□ 1.04
RFX2-210ENST00000588021 A0A0G2JS52 829 aa21.56■■□□□ 1.04
RFX2-210ENST00000588021 MYT1Q01538 1121 aa21.56■■□□□ 1.04
RFX2-210ENST00000588021 HSP90AB2PQ58FF8 381 aa21.56■■□□□ 1.04
RFX2-210ENST00000588021 NLRP2Q9NX02 1062 aa21.56■■□□□ 1.04
RFX2-210ENST00000588021 SMG6Q86US8 1419 aaKnown RBP21.56■■□□□ 1.04
RFX2-210ENST00000588021 SEPT12Q8IYM1 358 aa21.55■■□□□ 1.04
RFX2-210ENST00000588021 CARD10Q9BWT7 1032 aa21.55■■□□□ 1.04
RFX2-210ENST00000588021 BARGINQ6ZT62 677 aa21.55■■□□□ 1.04
RFX2-210ENST00000588021 FAM208AQ9UK61 1670 aaKnown RBP21.54■■□□□ 1.04
RFX2-210ENST00000588021 UPF1Q92900 1129 aaKnown RBP eCLIP21.53■■□□□ 1.04
RFX2-210ENST00000588021 THSD7AQ9UPZ6 1657 aa21.5■■□□□ 1.03
RFX2-210ENST00000588021 MTHFSP49914 203 aa21.5■■□□□ 1.03
RFX2-210ENST00000588021 CDCA7Q9BWT1 371 aaPredicted RBP21.49■■□□□ 1.03
RFX2-210ENST00000588021 RGPD2P0DJD1 1756 aa21.48■■□□□ 1.03
RFX2-210ENST00000588021 BRWD3Q6RI45 1802 aa21.47■■□□□ 1.03
RFX2-210ENST00000588021 NBPF6Q5VWK0 638 aa21.47■■□□□ 1.03
RFX2-210ENST00000588021 NBPF4Q96M43 638 aa21.47■■□□□ 1.03
RFX2-210ENST00000588021 WNK3Q9BYP7 1800 aa21.47■■□□□ 1.03
RFX2-210ENST00000588021 EIF4A2Q14240 407 aaKnown RBP21.46■■□□□ 1.03
RFX2-210ENST00000588021 KRT27Q7Z3Y8 459 aa21.46■■□□□ 1.03
RFX2-210ENST00000588021 PARP4Q9UKK3 1724 aaKnown RBP21.44■■□□□ 1.02
RFX2-210ENST00000588021 PARD3Q8TEW0 1356 aa21.44■■□□□ 1.02
RFX2-210ENST00000588021 IL2RBP14784 551 aa21.44■■□□□ 1.02
RFX2-210ENST00000588021 PPP2R1AP30153 589 aa21.44■■□□□ 1.02
RFX2-210ENST00000588021 DISP2A7MBM2 1401 aa21.43■■□□□ 1.02
RFX2-210ENST00000588021 RALBP1Q15311 655 aa21.43■■□□□ 1.02
RFX2-210ENST00000588021 DDB1Q16531 1140 aa21.43■■□□□ 1.02
RFX2-210ENST00000588021 USHBP1Q8N6Y0 703 aa21.43■■□□□ 1.02
RFX2-210ENST00000588021 PDE3BQ13370 1112 aa21.42■■□□□ 1.02
RFX2-210ENST00000588021 EYA1Q99502 592 aa21.42■■□□□ 1.02
RFX2-210ENST00000588021 CCDC125Q86Z20 511 aa21.41■■□□□ 1.02
RFX2-210ENST00000588021 CFAP53Q96M91 514 aa21.41■■□□□ 1.02
RFX2-210ENST00000588021 EXOC5O00471 708 aa21.4■■□□□ 1.02
RFX2-210ENST00000588021 RAPGEF4Q8WZA2 1011 aa21.4■■□□□ 1.02
RFX2-210ENST00000588021 LRRC37A3O60309 1634 aa21.4■■□□□ 1.02
RFX2-210ENST00000588021 DIAPH1O60610 1272 aaKnown RBP21.39■■□□□ 1.01
RFX2-210ENST00000588021 IL13P35225 146 aa21.39■■□□□ 1.01
RFX2-210ENST00000588021 TATP17735 454 aaPredicted RBP21.37■■□□□ 1.01
RFX2-210ENST00000588021 IGSF1Q8N6C5 1336 aa21.37■■□□□ 1.01
RFX2-210ENST00000588021 NCAPD2Q15021 1401 aa21.37■■□□□ 1.01
RFX2-210ENST00000588021 TNS2Q63HR2 1409 aa21.36■■□□□ 1.01
RFX2-210ENST00000588021 FAM182BQ5T319 152 aa21.35■■□□□ 1.01
RFX2-210ENST00000588021 MEGF6O75095 1541 aa21.35■■□□□ 1.01
RFX2-210ENST00000588021 COL3A1P02461 1466 aaPredicted RBP21.34■■□□□ 1.01
RFX2-210ENST00000588021 MYBBP1AQ9BQG0 1328 aaKnown RBP21.34■■□□□ 1.01
RFX2-210ENST00000588021 PRKRIP1Q9H875 184 aaPredicted RBP21.34■■□□□ 1.01
RFX2-210ENST00000588021 EP400Q96L91 3159 aa21.34■■□□□ 1.01
RFX2-210ENST00000588021 OVOS2A0A0G2JMS6 1433 aa21.33■■□□□ 1.01
RFX2-210ENST00000588021 ZCRB1Q8TBF4 217 aaKnown RBP21.33■■□□□ 1.01
RFX2-210ENST00000588021 RGPD1P0DJD0 1748 aa21.33■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms