RNA–Protein interactions for RNA: ENST00000587905.5

LDLRAD4-212, Transcript of low density lipoprotein receptor class A domain containing 4, humanhuman

TSL 5

Gene LDLRAD4, Length 743 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD4-212ENST00000587905 USP35Q9P2H5 1018 aa28.22■■■□□ 2.11
LDLRAD4-212ENST00000587905 COL5A2P05997 1499 aaPredicted RBP28.21■■■□□ 2.11
LDLRAD4-212ENST00000587905 FYB1O15117 783 aa28.21■■■□□ 2.11
LDLRAD4-212ENST00000587905 FAM98CQ17RN3 349 aaKnown RBP28.21■■■□□ 2.11
LDLRAD4-212ENST00000587905 LARP1Q6PKG0 1096 aaKnown RBP28.21■■■□□ 2.11
LDLRAD4-212ENST00000587905 KIF7Q2M1P5 1343 aa28.19■■■□□ 2.1
LDLRAD4-212ENST00000587905 AXIN2Q9Y2T1 843 aa28.19■■■□□ 2.1
LDLRAD4-212ENST00000587905 SEPT12Q8IYM1 358 aa28.18■■■□□ 2.1
LDLRAD4-212ENST00000587905 SPATA31A1Q5TZJ5 1347 aa28.18■■■□□ 2.1
LDLRAD4-212ENST00000587905 PANK3Q9H999 370 aa28.17■■■□□ 2.1
LDLRAD4-212ENST00000587905 BRWD3Q6RI45 1802 aa28.16■■■□□ 2.1
LDLRAD4-212ENST00000587905 FBLN1P23142 703 aa28.15■■■□□ 2.1
LDLRAD4-212ENST00000587905 CSB-PGBD3P0DP91 1061 aa28.14■■■□□ 2.1
LDLRAD4-212ENST00000587905 TOM1L2Q6ZVM7 507 aa28.13■■■□□ 2.09
LDLRAD4-212ENST00000587905 CGNL1Q0VF96 1302 aa28.13■■■□□ 2.09
LDLRAD4-212ENST00000587905 CRB1P82279 1406 aa28.12■■■□□ 2.09
LDLRAD4-212ENST00000587905 ABCC6O95255 1503 aa28.12■■■□□ 2.09
LDLRAD4-212ENST00000587905 ONECUT3O60422 494 aaPredicted RBP28.11■■■□□ 2.09
LDLRAD4-212ENST00000587905 WDR17Q8IZU2 1322 aa28.1■■■□□ 2.09
LDLRAD4-212ENST00000587905 TCP11L2Q8N4U5 519 aa28.09■■■□□ 2.09
LDLRAD4-212ENST00000587905 MAP3K19Q56UN5 1328 aa28.09■■■□□ 2.09
LDLRAD4-212ENST00000587905 THSD7AQ9UPZ6 1657 aa28.09■■■□□ 2.09
LDLRAD4-212ENST00000587905 RRS1Q15050 365 aaKnown RBP28.08■■■□□ 2.09
LDLRAD4-212ENST00000587905 CCDC7Q96M83 1385 aa28.08■■■□□ 2.09
LDLRAD4-212ENST00000587905 AMPHP49418 695 aa28.07■■■□□ 2.08
LDLRAD4-212ENST00000587905 KRT27Q7Z3Y8 459 aa28.06■■■□□ 2.08
LDLRAD4-212ENST00000587905 UPF1Q92900 1129 aaKnown RBP eCLIP28.06■■■□□ 2.08
LDLRAD4-212ENST00000587905 WASHC2AQ641Q2 1341 aa28.06■■■□□ 2.08
LDLRAD4-212ENST00000587905 ANKRD26Q9UPS8 1709 aa28.05■■■□□ 2.08
LDLRAD4-212ENST00000587905 BARGINQ6ZT62 677 aa28.04■■■□□ 2.08
LDLRAD4-212ENST00000587905 ANKRD24Q8TF21 1146 aa28.04■■■□□ 2.08
LDLRAD4-212ENST00000587905 IP6K1Q92551 441 aa28.04■■■□□ 2.08
LDLRAD4-212ENST00000587905 LTV1Q96GA3 475 aaPredicted RBP28.04■■■□□ 2.08
LDLRAD4-212ENST00000587905 ERBB3P21860 1342 aa28.03■■■□□ 2.08
LDLRAD4-212ENST00000587905 THRAP3Q9Y2W1 955 aaKnown RBP28.03■■■□□ 2.08
LDLRAD4-212ENST00000587905 BLMP54132 1417 aaPredicted RBP28.02■■■□□ 2.08
LDLRAD4-212ENST00000587905 HOXC9P31274 260 aa28.02■■■□□ 2.08
LDLRAD4-212ENST00000587905 KNSTRNQ9Y448 316 aa28.02■■■□□ 2.08
LDLRAD4-212ENST00000587905 TNNT2P45379 298 aaPredicted RBP28.01■■■□□ 2.07
LDLRAD4-212ENST00000587905 NLRP2Q9NX02 1062 aa28.01■■■□□ 2.07
LDLRAD4-212ENST00000587905 WNK3Q9BYP7 1800 aa27.99■■■□□ 2.07
LDLRAD4-212ENST00000587905 FAM182BQ5T319 152 aa27.99■■■□□ 2.07
LDLRAD4-212ENST00000587905 CARD10Q9BWT7 1032 aa27.99■■■□□ 2.07
LDLRAD4-212ENST00000587905 PEAK1Q9H792 1746 aa27.98■■■□□ 2.07
LDLRAD4-212ENST00000587905 RTL1A6NKG5 1358 aa27.98■■■□□ 2.07
LDLRAD4-212ENST00000587905 PPM1GO15355 546 aaPredicted RBP27.97■■■□□ 2.07
LDLRAD4-212ENST00000587905 PARP4Q9UKK3 1724 aaKnown RBP27.96■■■□□ 2.07
LDLRAD4-212ENST00000587905 EMILIN1Q9Y6C2 1016 aa27.96■■■□□ 2.07
LDLRAD4-212ENST00000587905 NSD2O96028 1365 aa27.96■■■□□ 2.07
LDLRAD4-212ENST00000587905 MAP2P11137 1827 aaKnown RBP27.95■■■□□ 2.07
LDLRAD4-212ENST00000587905 PDE3BQ13370 1112 aa27.95■■■□□ 2.06
LDLRAD4-212ENST00000587905 FAM208AQ9UK61 1670 aaKnown RBP27.94■■■□□ 2.06
LDLRAD4-212ENST00000587905 EP400Q96L91 3159 aa27.94■■■□□ 2.06
LDLRAD4-212ENST00000587905 LRRC37A3O60309 1634 aa27.93■■■□□ 2.06
LDLRAD4-212ENST00000587905 MORC1Q86VD1 984 aa27.93■■■□□ 2.06
LDLRAD4-212ENST00000587905 FLT4P35916 1363 aa27.93■■■□□ 2.06
LDLRAD4-212ENST00000587905 RGPD2P0DJD1 1756 aa27.93■■■□□ 2.06
LDLRAD4-212ENST00000587905 HSP90AB2PQ58FF8 381 aa27.92■■■□□ 2.06
LDLRAD4-212ENST00000587905 CNGB1Q14028 1251 aaPredicted RBP27.91■■■□□ 2.06
LDLRAD4-212ENST00000587905 SMG6Q86US8 1419 aaKnown RBP27.91■■■□□ 2.06
LDLRAD4-212ENST00000587905 DDB1Q16531 1140 aa27.9■■■□□ 2.06
LDLRAD4-212ENST00000587905 KIF24Q5T7B8 1368 aa27.89■■■□□ 2.06
LDLRAD4-212ENST00000587905 ZEB1P37275 1124 aaPredicted RBP27.89■■■□□ 2.06
LDLRAD4-212ENST00000587905 AMER1Q5JTC6 1135 aaPredicted RBP27.89■■■□□ 2.06
LDLRAD4-212ENST00000587905 CDCA7Q9BWT1 371 aaPredicted RBP27.89■■■□□ 2.06
LDLRAD4-212ENST00000587905 INSRP06213 1382 aa27.88■■■□□ 2.05
LDLRAD4-212ENST00000587905 DISP2A7MBM2 1401 aa27.88■■■□□ 2.05
LDLRAD4-212ENST00000587905 CC2D1BQ5T0F9 858 aaKnown RBP27.88■■■□□ 2.05
LDLRAD4-212ENST00000587905 PER1O15534 1290 aaPredicted RBP27.87■■■□□ 2.05
LDLRAD4-212ENST00000587905 POLKQ9UBT6 870 aa27.87■■■□□ 2.05
LDLRAD4-212ENST00000587905 IL2RBP14784 551 aa27.85■■■□□ 2.05
LDLRAD4-212ENST00000587905 SF3B2Q13435 895 aaKnown RBP27.84■■■□□ 2.05
LDLRAD4-212ENST00000587905 USHBP1Q8N6Y0 703 aa27.84■■■□□ 2.05
LDLRAD4-212ENST00000587905 NBPF6Q5VWK0 638 aa27.83■■■□□ 2.05
LDLRAD4-212ENST00000587905 FAM196AQ6ZSG2 479 aa27.83■■■□□ 2.05
LDLRAD4-212ENST00000587905 CCDC125Q86Z20 511 aa27.83■■■□□ 2.05
LDLRAD4-212ENST00000587905 NBPF4Q96M43 638 aa27.83■■■□□ 2.05
LDLRAD4-212ENST00000587905 EXOC5O00471 708 aa27.82■■■□□ 2.04
LDLRAD4-212ENST00000587905 TNS2Q63HR2 1409 aa27.81■■■□□ 2.04
LDLRAD4-212ENST00000587905 RGPD1P0DJD0 1748 aa27.8■■■□□ 2.04
LDLRAD4-212ENST00000587905 OVOS2A0A0G2JMS6 1433 aa27.79■■■□□ 2.04
LDLRAD4-212ENST00000587905 TRIM37O94972 964 aa27.78■■■□□ 2.04
LDLRAD4-212ENST00000587905 MARCH10Q8NA82 808 aaPredicted RBP27.77■■■□□ 2.04
LDLRAD4-212ENST00000587905 DEFB132Q7Z7B7 95 aa27.76■■■□□ 2.03
LDLRAD4-212ENST00000587905 MEGF6O75095 1541 aa27.75■■■□□ 2.03
LDLRAD4-212ENST00000587905 TNS1Q9HBL0 1735 aaKnown RBP27.75■■■□□ 2.03
LDLRAD4-212ENST00000587905 EIF4A2Q14240 407 aaKnown RBP27.73■■■□□ 2.03
LDLRAD4-212ENST00000587905 RAPGEF4Q8WZA2 1011 aa27.73■■■□□ 2.03
LDLRAD4-212ENST00000587905 NPC1L1Q9UHC9 1359 aa27.73■■■□□ 2.03
LDLRAD4-212ENST00000587905 BAG6P46379 1132 aa27.71■■■□□ 2.03
LDLRAD4-212ENST00000587905 SBF2Q86WG5 1849 aa27.71■■■□□ 2.03
LDLRAD4-212ENST00000587905 DDX54Q8TDD1 881 aaKnown RBP27.7■■■□□ 2.02
LDLRAD4-212ENST00000587905 EYA1Q99502 592 aa27.7■■■□□ 2.02
LDLRAD4-212ENST00000587905 TATP17735 454 aaPredicted RBP27.69■■■□□ 2.02
LDLRAD4-212ENST00000587905 MTHFSP49914 203 aa27.68■■■□□ 2.02
LDLRAD4-212ENST00000587905 APBA3O96018 575 aa27.67■■■□□ 2.02
LDLRAD4-212ENST00000587905 EN1Q05925 392 aaPredicted RBP27.67■■■□□ 2.02
LDLRAD4-212ENST00000587905 ZCRB1Q8TBF4 217 aaKnown RBP27.67■■■□□ 2.02
LDLRAD4-212ENST00000587905 SHANK3Q9BYB0 1731 aa27.66■■■□□ 2.02
LDLRAD4-212ENST00000587905 DDX10Q13206 875 aaKnown RBP27.64■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms