RNA–Protein interactions for RNA: ENST00000587788.1

SDF2-206, Transcript of stromal cell derived factor 2, humanhuman

TSL 3

Gene SDF2, Length 444 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-206ENST00000587788 UPF1Q92900 1129 aaKnown RBP eCLIP7.84□□□□□ -1.15
SDF2-206ENST00000587788 USP47Q96K76 1375 aa7.84□□□□□ -1.16
SDF2-206ENST00000587788 ARHGEF28Q8N1W1 1705 aaKnown RBP7.83□□□□□ -1.16
SDF2-206ENST00000587788 NEFLP07196 543 aa7.83□□□□□ -1.16
SDF2-206ENST00000587788 BRPF1P55201 1214 aaPredicted RBP7.83□□□□□ -1.16
SDF2-206ENST00000587788 PIP4K2BP78356 416 aa7.83□□□□□ -1.16
SDF2-206ENST00000587788 SLC24A3Q9HC58 644 aa7.83□□□□□ -1.16
SDF2-206ENST00000587788 AMOTL2Q9Y2J4 779 aa7.83□□□□□ -1.16
SDF2-206ENST00000587788 PRAG1Q86YV5 1406 aa7.83□□□□□ -1.16
SDF2-206ENST00000587788 PHLPP1O60346 1717 aa7.83□□□□□ -1.16
SDF2-206ENST00000587788 KIAA1210Q9ULL0 1709 aa7.83□□□□□ -1.16
SDF2-206ENST00000587788 KIF7Q2M1P5 1343 aa7.82□□□□□ -1.16
SDF2-206ENST00000587788 ADGRB1O14514 1584 aa7.82□□□□□ -1.16
SDF2-206ENST00000587788 PRKRIP1Q9H875 184 aaPredicted RBP7.82□□□□□ -1.16
SDF2-206ENST00000587788 SUPT16HQ9Y5B9 1047 aaKnown RBP7.82□□□□□ -1.16
SDF2-206ENST00000587788 KTN1Q86UP2 1357 aaKnown RBP7.82□□□□□ -1.16
SDF2-206ENST00000587788 ROBO2Q9HCK4 1378 aa7.82□□□□□ -1.16
SDF2-206ENST00000587788 FMN2Q9NZ56 1722 aa7.81□□□□□ -1.16
SDF2-206ENST00000587788 PTCH1Q13635 1447 aa7.81□□□□□ -1.16
SDF2-206ENST00000587788 OSBPP22059 807 aa7.81□□□□□ -1.16
SDF2-206ENST00000587788 CARD11Q9BXL7 1154 aa7.81□□□□□ -1.16
SDF2-206ENST00000587788 MSH6P52701 1360 aa7.81□□□□□ -1.16
SDF2-206ENST00000587788 NHSL1Q5SYE7 1610 aa7.81□□□□□ -1.16
SDF2-206ENST00000587788 TRPM1Q7Z4N2 1603 aa7.81□□□□□ -1.16
SDF2-206ENST00000587788 TECPR2O15040 1411 aa7.8□□□□□ -1.16
SDF2-206ENST00000587788 ADGRL3Q9HAR2 1447 aa7.8□□□□□ -1.16
SDF2-206ENST00000587788 C11orf95C9JLR9 678 aaPredicted RBP7.8□□□□□ -1.16
SDF2-206ENST00000587788 TOM1O60784 492 aa7.8□□□□□ -1.16
SDF2-206ENST00000587788 TMEM132EQ6IEE7 984 aa7.8□□□□□ -1.16
SDF2-206ENST00000587788 COL16A1Q07092 1604 aaPredicted RBP7.8□□□□□ -1.16
SDF2-206ENST00000587788 YTHDC2Q9H6S0 1430 aaKnown RBP7.79□□□□□ -1.16
SDF2-206ENST00000587788 NCOA3Q9Y6Q9 1424 aa7.79□□□□□ -1.16
SDF2-206ENST00000587788 EVI5O60447 810 aa7.79□□□□□ -1.16
SDF2-206ENST00000587788 HSPA1LP34931 641 aa7.79□□□□□ -1.16
SDF2-206ENST00000587788 CFAP70Q5T0N1 1121 aa7.79□□□□□ -1.16
SDF2-206ENST00000587788 ERICH6BQ5W0A0 696 aa7.79□□□□□ -1.16
SDF2-206ENST00000587788 C14orf93Q9H972 538 aaKnown RBP7.79□□□□□ -1.16
SDF2-206ENST00000587788 ANO8Q9HCE9 1232 aaPredicted RBP7.79□□□□□ -1.16
SDF2-206ENST00000587788 EIF2AK3Q9NZJ5 1116 aaKnown RBP7.79□□□□□ -1.16
SDF2-206ENST00000587788 CDC42BPGQ6DT37 1551 aa7.79□□□□□ -1.16
SDF2-206ENST00000587788 USP32Q8NFA0 1604 aa7.78□□□□□ -1.16
SDF2-206ENST00000587788 TBC1D12O60347 775 aa7.78□□□□□ -1.16
SDF2-206ENST00000587788 TMEM132AQ24JP5 1023 aa7.78□□□□□ -1.16
SDF2-206ENST00000587788 LRPPRCP42704 1394 aaKnown RBP7.78□□□□□ -1.16
SDF2-206ENST00000587788 GPRASP1Q5JY77 1395 aa7.78□□□□□ -1.16
SDF2-206ENST00000587788 PLEKHH1Q9ULM0 1364 aa7.78□□□□□ -1.16
SDF2-206ENST00000587788 DCCP43146 1447 aa7.78□□□□□ -1.16
SDF2-206ENST00000587788 MST1RQ04912 1400 aa7.78□□□□□ -1.16
SDF2-206ENST00000587788 FAM135BQ49AJ0 1406 aa7.78□□□□□ -1.16
SDF2-206ENST00000587788 MED1Q15648 1581 aaPredicted RBP7.77□□□□□ -1.17
SDF2-206ENST00000587788 GRXCR2A6NFK2 248 aa7.77□□□□□ -1.17
SDF2-206ENST00000587788 POTEJP0CG39 1038 aa7.77□□□□□ -1.17
SDF2-206ENST00000587788 PRIM1P49642 420 aaKnown RBP7.77□□□□□ -1.17
SDF2-206ENST00000587788 HNRNPUQ00839 825 aaKnown RBP eCLIP7.77□□□□□ -1.17
SDF2-206ENST00000587788 C14orf37Q86TY3 774 aa7.77□□□□□ -1.17
SDF2-206ENST00000587788 STK26Q9P289 416 aa7.77□□□□□ -1.17
SDF2-206ENST00000587788 AHDC1Q5TGY3 1603 aaPredicted RBP7.77□□□□□ -1.17
SDF2-206ENST00000587788 DLC1Q96QB1 1528 aa7.77□□□□□ -1.17
SDF2-206ENST00000587788 QRICH2Q9H0J4 1663 aa7.76□□□□□ -1.17
SDF2-206ENST00000587788 ADGRB2O60241 1585 aa7.76□□□□□ -1.17
SDF2-206ENST00000587788 ABCC11Q96J66 1382 aa7.76□□□□□ -1.17
SDF2-206ENST00000587788 RALBP1Q15311 655 aa7.76□□□□□ -1.17
SDF2-206ENST00000587788 NBPF1Q3BBV0 1214 aa7.76□□□□□ -1.17
SDF2-206ENST00000587788 CDCA8Q53HL2 280 aa7.76□□□□□ -1.17
SDF2-206ENST00000587788 DDX12PQ92771 950 aa7.76□□□□□ -1.17
SDF2-206ENST00000587788 AK7Q96M32 723 aa7.76□□□□□ -1.17
SDF2-206ENST00000587788 C19orf44Q9H6X5 657 aa7.76□□□□□ -1.17
SDF2-206ENST00000587788 MRS2Q9HD23 443 aa7.76□□□□□ -1.17
SDF2-206ENST00000587788 SLAIN2Q9P270 581 aa7.76□□□□□ -1.17
SDF2-206ENST00000587788 SHPRHQ149N8 1683 aa7.76□□□□□ -1.17
SDF2-206ENST00000587788 WAPLQ7Z5K2 1190 aa7.75□□□□□ -1.17
SDF2-206ENST00000587788 ZBED9Q6R2W3 1325 aa7.75□□□□□ -1.17
SDF2-206ENST00000587788 C1orf167Q5SNV9 1468 aa7.75□□□□□ -1.17
SDF2-206ENST00000587788 ST20-MTHFSA0A0A6YYL1 179 aa7.74□□□□□ -1.17
SDF2-206ENST00000587788 ATF3P18847 181 aa7.74□□□□□ -1.17
SDF2-206ENST00000587788 ITSN1Q15811 1721 aa7.74□□□□□ -1.17
SDF2-206ENST00000587788 KIF1AQ12756 1690 aa7.73□□□□□ -1.17
SDF2-206ENST00000587788 TOPAZ1Q8N9V7 1692 aa7.73□□□□□ -1.17
SDF2-206ENST00000587788 TMF1P82094 1093 aa7.73□□□□□ -1.17
SDF2-206ENST00000587788 SIRT1Q96EB6 747 aa7.73□□□□□ -1.17
SDF2-206ENST00000587788 PCDHGA4Q9Y5G9 962 aa7.73□□□□□ -1.17
SDF2-206ENST00000587788 BRD4O60885 1362 aaPredicted RBP7.72□□□□□ -1.17
SDF2-206ENST00000587788 POTEB2H3BUK9 544 aa7.72□□□□□ -1.17
SDF2-206ENST00000587788 SAFB2Q14151 953 aaKnown RBP eCLIP7.72□□□□□ -1.17
SDF2-206ENST00000587788 NEUROD2Q15784 382 aa7.72□□□□□ -1.17
SDF2-206ENST00000587788 BRINP3Q76B58 766 aa7.72□□□□□ -1.17
SDF2-206ENST00000587788 DDX17Q92841 729 aaKnown RBP7.72□□□□□ -1.17
SDF2-206ENST00000587788 PUS7Q96PZ0 661 aaKnown RBP7.72□□□□□ -1.17
SDF2-206ENST00000587788 TRAK1Q9UPV9 953 aa7.72□□□□□ -1.17
SDF2-206ENST00000587788 TRIM66O15016 1216 aa7.71□□□□□ -1.18
SDF2-206ENST00000587788 FCHSD2O94868 740 aa7.71□□□□□ -1.18
SDF2-206ENST00000587788 PHF14O94880 888 aa7.71□□□□□ -1.18
SDF2-206ENST00000587788 MAP2K5Q13163 448 aa7.71□□□□□ -1.18
SDF2-206ENST00000587788 HIC1Q14526 733 aa7.71□□□□□ -1.18
SDF2-206ENST00000587788 FAM9BQ8IZU0 186 aa7.71□□□□□ -1.18
SDF2-206ENST00000587788 TMC1Q8TDI8 760 aa7.71□□□□□ -1.18
SDF2-206ENST00000587788 PRAM1Q96QH2 718 aa7.71□□□□□ -1.18
SDF2-206ENST00000587788 ABCA3Q99758 1704 aa7.71□□□□□ -1.18
SDF2-206ENST00000587788 TRPM3Q9HCF6 1732 aaPredicted RBP7.71□□□□□ -1.18
SDF2-206ENST00000587788 MARF1Q9Y4F3 1742 aaKnown RBP7.71□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 127.4 ms