RNA–Protein interactions for RNA: ENST00000587774.1

TRIM47-205, Transcript of tripartite motif containing 47, humanhuman

TSL 2

Gene TRIM47, Length 720 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-205ENST00000587774 FAM196AQ6ZSG2 479 aa26.69■■□□□ 1.86
TRIM47-205ENST00000587774 TRIM26Q12899 539 aaPredicted RBP26.68■■□□□ 1.86
TRIM47-205ENST00000587774 TRIM37O94972 964 aa26.67■■□□□ 1.86
TRIM47-205ENST00000587774 PDE3BQ13370 1112 aa26.66■■□□□ 1.86
TRIM47-205ENST00000587774 SOX12O15370 315 aa26.65■■□□□ 1.86
TRIM47-205ENST00000587774 KCNH5Q8NCM2 988 aa26.65■■□□□ 1.86
TRIM47-205ENST00000587774 ARHGEF25Q86VW2 580 aa26.64■■□□□ 1.86
TRIM47-205ENST00000587774 AXIN2Q9Y2T1 843 aa26.64■■□□□ 1.86
TRIM47-205ENST00000587774 FAM208AQ9UK61 1670 aaKnown RBP26.63■■□□□ 1.85
TRIM47-205ENST00000587774 WDR17Q8IZU2 1322 aa26.63■■□□□ 1.85
TRIM47-205ENST00000587774 PSDA5PKW4 1024 aaPredicted RBP26.62■■□□□ 1.85
TRIM47-205ENST00000587774 USP31Q70CQ4 1352 aa26.61■■□□□ 1.85
TRIM47-205ENST00000587774 EZH2Q15910 746 aaKnown RBP26.61■■□□□ 1.85
TRIM47-205ENST00000587774 TOM1L2Q6ZVM7 507 aa26.61■■□□□ 1.85
TRIM47-205ENST00000587774 OVOS2A0A0G2JMS6 1433 aa26.61■■□□□ 1.85
TRIM47-205ENST00000587774 OVOS2A0A0J9YW53 1432 aa26.61■■□□□ 1.85
TRIM47-205ENST00000587774 OVOS2Q6IE36 1432 aa26.61■■□□□ 1.85
TRIM47-205ENST00000587774 EDC4Q6P2E9 1401 aaKnown RBP26.61■■□□□ 1.85
TRIM47-205ENST00000587774 A0A1W2PP64 1363 aa26.6■■□□□ 1.85
TRIM47-205ENST00000587774 SUGP2Q8IX01 1082 aaKnown RBP eCLIP26.6■■□□□ 1.85
TRIM47-205ENST00000587774 TMC1Q8TDI8 760 aa26.6■■□□□ 1.85
TRIM47-205ENST00000587774 KIF20BQ96Q89 1820 aa26.6■■□□□ 1.85
TRIM47-205ENST00000587774 PARD3Q8TEW0 1356 aa26.58■■□□□ 1.85
TRIM47-205ENST00000587774 RGPD2P0DJD1 1756 aa26.58■■□□□ 1.85
TRIM47-205ENST00000587774 APBA3O96018 575 aa26.57■■□□□ 1.84
TRIM47-205ENST00000587774 NME9Q86XW9 330 aa26.57■■□□□ 1.84
TRIM47-205ENST00000587774 CAMKK2Q96RR4 588 aa26.57■■□□□ 1.84
TRIM47-205ENST00000587774 SLC12A5Q9H2X9 1139 aa26.57■■□□□ 1.84
TRIM47-205ENST00000587774 KAT6BQ8WYB5 2073 aa26.57■■□□□ 1.84
TRIM47-205ENST00000587774 HDGFL2Q7Z4V5 671 aaPredicted RBP26.56■■□□□ 1.84
TRIM47-205ENST00000587774 MYOM1P52179 1685 aa26.55■■□□□ 1.84
TRIM47-205ENST00000587774 TESK2Q96S53 571 aa26.55■■□□□ 1.84
TRIM47-205ENST00000587774 NHSQ6T4R5 1651 aa26.54■■□□□ 1.84
TRIM47-205ENST00000587774 ST20-MTHFSA0A0A6YYL1 179 aa26.53■■□□□ 1.84
TRIM47-205ENST00000587774 DDB1Q16531 1140 aa26.53■■□□□ 1.84
TRIM47-205ENST00000587774 R3HDM1Q15032 1099 aaKnown RBP26.52■■□□□ 1.84
TRIM47-205ENST00000587774 PUS7Q96PZ0 661 aaKnown RBP26.52■■□□□ 1.84
TRIM47-205ENST00000587774 TERF2IPQ9NYB0 399 aa26.52■■□□□ 1.84
TRIM47-205ENST00000587774 NINLQ9Y2I6 1382 aa26.52■■□□□ 1.84
TRIM47-205ENST00000587774 CSB-PGBD3P0DP91 1061 aa26.51■■□□□ 1.83
TRIM47-205ENST00000587774 CARD10Q9BWT7 1032 aa26.51■■□□□ 1.83
TRIM47-205ENST00000587774 TNS2Q63HR2 1409 aa26.49■■□□□ 1.83
TRIM47-205ENST00000587774 CCDC7Q96M83 1385 aa26.49■■□□□ 1.83
TRIM47-205ENST00000587774 USP47Q96K76 1375 aa26.48■■□□□ 1.83
TRIM47-205ENST00000587774 ERBB3P21860 1342 aa26.48■■□□□ 1.83
TRIM47-205ENST00000587774 C11orf95C9JLR9 678 aaPredicted RBP26.48■■□□□ 1.83
TRIM47-205ENST00000587774 CDCA7Q9BWT1 371 aaPredicted RBP26.48■■□□□ 1.83
TRIM47-205ENST00000587774 BTAF1O14981 1849 aa26.48■■□□□ 1.83
TRIM47-205ENST00000587774 SHANK3Q9BYB0 1731 aa26.47■■□□□ 1.83
TRIM47-205ENST00000587774 BCL9O00512 1426 aa26.46■■□□□ 1.83
TRIM47-205ENST00000587774 CASZ1Q86V15 1759 aa26.45■■□□□ 1.82
TRIM47-205ENST00000587774 MARCH10Q8NA82 808 aaPredicted RBP26.44■■□□□ 1.82
TRIM47-205ENST00000587774 ANKRD36BQ8N2N9 1353 aa26.43■■□□□ 1.82
TRIM47-205ENST00000587774 SLC24A1O60721 1099 aa26.4■■□□□ 1.82
TRIM47-205ENST00000587774 PTF1AQ7RTS3 328 aa26.4■■□□□ 1.82
TRIM47-205ENST00000587774 DOT1LQ8TEK3 1739 aa26.39■■□□□ 1.82
TRIM47-205ENST00000587774 ANKRD24Q8TF21 1146 aa26.38■■□□□ 1.81
TRIM47-205ENST00000587774 BCL11BQ9C0K0 894 aaPredicted RBP26.38■■□□□ 1.81
TRIM47-205ENST00000587774 NLRP2Q9NX02 1062 aa26.38■■□□□ 1.81
TRIM47-205ENST00000587774 EXOC5O00471 708 aa26.36■■□□□ 1.81
TRIM47-205ENST00000587774 TMF1P82094 1093 aa26.36■■□□□ 1.81
TRIM47-205ENST00000587774 PLSCR1O15162 318 aa26.35■■□□□ 1.81
TRIM47-205ENST00000587774 NBPF14Q5TI25 921 aa26.35■■□□□ 1.81
TRIM47-205ENST00000587774 ANKRD26Q9UPS8 1709 aa26.34■■□□□ 1.81
TRIM47-205ENST00000587774 COG3Q96JB2 828 aa26.34■■□□□ 1.81
TRIM47-205ENST00000587774 MAP2P11137 1827 aaKnown RBP26.34■■□□□ 1.81
TRIM47-205ENST00000587774 PAPPAQ13219 1627 aa26.32■■□□□ 1.8
TRIM47-205ENST00000587774 IL2RBP14784 551 aa26.32■■□□□ 1.8
TRIM47-205ENST00000587774 IP6K1Q92551 441 aa26.32■■□□□ 1.8
TRIM47-205ENST00000587774 MAP3K19Q56UN5 1328 aa26.31■■□□□ 1.8
TRIM47-205ENST00000587774 TUBGCP6Q96RT7 1819 aa26.29■■□□□ 1.8
TRIM47-205ENST00000587774 CLSPNQ9HAW4 1339 aa26.29■■□□□ 1.8
TRIM47-205ENST00000587774 LY75O60449 1722 aa26.28■■□□□ 1.8
TRIM47-205ENST00000587774 FBLN1P23142 703 aa26.28■■□□□ 1.8
TRIM47-205ENST00000587774 ANO8Q9HCE9 1232 aaPredicted RBP26.28■■□□□ 1.8
TRIM47-205ENST00000587774 RTL1A6NKG5 1358 aa26.28■■□□□ 1.8
TRIM47-205ENST00000587774 HOXC9P31274 260 aa26.27■■□□□ 1.8
TRIM47-205ENST00000587774 LTV1Q96GA3 475 aaPredicted RBP26.27■■□□□ 1.8
TRIM47-205ENST00000587774 PCGF6Q9BYE7 350 aa26.27■■□□□ 1.8
TRIM47-205ENST00000587774 QSER1Q2KHR3 1735 aa26.27■■□□□ 1.8
TRIM47-205ENST00000587774 KCNQ2O43526 872 aa26.26■■□□□ 1.79
TRIM47-205ENST00000587774 PROM2Q8N271 834 aa26.26■■□□□ 1.79
TRIM47-205ENST00000587774 TIMELESSQ9UNS1 1208 aa26.26■■□□□ 1.79
TRIM47-205ENST00000587774 FYB1O15117 783 aa26.24■■□□□ 1.79
TRIM47-205ENST00000587774 AMPHP49418 695 aa26.24■■□□□ 1.79
TRIM47-205ENST00000587774 CDCA8Q53HL2 280 aa26.24■■□□□ 1.79
TRIM47-205ENST00000587774 ACSBG1Q96GR2 724 aa26.24■■□□□ 1.79
TRIM47-205ENST00000587774 GGNBP2Q9H3C7 697 aa26.24■■□□□ 1.79
TRIM47-205ENST00000587774 MEGF6O75095 1541 aa26.24■■□□□ 1.79
TRIM47-205ENST00000587774 TXNRD1Q16881 649 aa26.22■■□□□ 1.79
TRIM47-205ENST00000587774 RRS1Q15050 365 aaKnown RBP26.21■■□□□ 1.79
TRIM47-205ENST00000587774 NSD3Q9BZ95 1437 aa26.21■■□□□ 1.79
TRIM47-205ENST00000587774 ITGB4P16144 1822 aa26.21■■□□□ 1.79
TRIM47-205ENST00000587774 PKD1L3Q7Z443 1732 aa26.2■■□□□ 1.79
TRIM47-205ENST00000587774 SMG6Q86US8 1419 aaKnown RBP26.18■■□□□ 1.78
TRIM47-205ENST00000587774 SPON1Q9HCB6 807 aa26.17■■□□□ 1.78
TRIM47-205ENST00000587774 TOGARAM1Q9Y4F4 1720 aa26.17■■□□□ 1.78
TRIM47-205ENST00000587774 PDGFDQ9GZP0 370 aaPredicted RBP26.16■■□□□ 1.78
TRIM47-205ENST00000587774 DDX54Q8TDD1 881 aaKnown RBP26.15■■□□□ 1.78
TRIM47-205ENST00000587774 CARD14Q9BXL6 1004 aa26.15■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms