RNA–Protein interactions for RNA: ENST00000587629.5

SDF2-205, Transcript of stromal cell derived factor 2, humanhuman

TSL 3

Gene SDF2, Length 775 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-205ENST00000587629 AXIN2Q9Y2T1 843 aa9.19□□□□□ -0.94
SDF2-205ENST00000587629 THRAP3Q9Y2W1 955 aaKnown RBP9.19□□□□□ -0.94
SDF2-205ENST00000587629 ROCK2O75116 1388 aaKnown RBP9.19□□□□□ -0.94
SDF2-205ENST00000587629 DISP2A7MBM2 1401 aa9.19□□□□□ -0.94
SDF2-205ENST00000587629 COL5A2P05997 1499 aaPredicted RBP9.19□□□□□ -0.94
SDF2-205ENST00000587629 LRP5O75197 1615 aa9.19□□□□□ -0.94
SDF2-205ENST00000587629 LMO7Q8WWI1 1683 aa9.19□□□□□ -0.94
SDF2-205ENST00000587629 CRB1P82279 1406 aa9.17□□□□□ -0.94
SDF2-205ENST00000587629 AATKQ6ZMQ8 1374 aa9.17□□□□□ -0.94
SDF2-205ENST00000587629 TTC21BQ7Z4L5 1316 aa9.17□□□□□ -0.94
SDF2-205ENST00000587629 CSB-PGBD3P0DP91 1061 aa9.17□□□□□ -0.94
SDF2-205ENST00000587629 DDB1Q16531 1140 aa9.17□□□□□ -0.94
SDF2-205ENST00000587629 NBPF14Q5TI25 921 aa9.17□□□□□ -0.94
SDF2-205ENST00000587629 PTF1AQ7RTS3 328 aa9.17□□□□□ -0.94
SDF2-205ENST00000587629 BRD4O60885 1362 aaPredicted RBP9.16□□□□□ -0.94
SDF2-205ENST00000587629 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.16□□□□□ -0.94
SDF2-205ENST00000587629 ZNF692Q9BU19 519 aaPredicted RBP9.16□□□□□ -0.94
SDF2-205ENST00000587629 PARD3Q8TEW0 1356 aa9.15□□□□□ -0.94
SDF2-205ENST00000587629 WDR17Q8IZU2 1322 aa9.15□□□□□ -0.94
SDF2-205ENST00000587629 ARHGEF25Q86VW2 580 aa9.15□□□□□ -0.94
SDF2-205ENST00000587629 MARCH10Q8NA82 808 aaPredicted RBP9.15□□□□□ -0.94
SDF2-205ENST00000587629 PIK3C2AO00443 1686 aa9.15□□□□□ -0.94
SDF2-205ENST00000587629 TRPM1Q7Z4N2 1603 aa9.15□□□□□ -0.94
SDF2-205ENST00000587629 SLIT3O75094 1523 aa9.15□□□□□ -0.95
SDF2-205ENST00000587629 KTN1Q86UP2 1357 aaKnown RBP9.14□□□□□ -0.95
SDF2-205ENST00000587629 POLA2Q14181 598 aa9.14□□□□□ -0.95
SDF2-205ENST00000587629 KCNH5Q8NCM2 988 aa9.14□□□□□ -0.95
SDF2-205ENST00000587629 TMC1Q8TDI8 760 aa9.14□□□□□ -0.95
SDF2-205ENST00000587629 OVOS2A0A0G2JMS6 1433 aa9.14□□□□□ -0.95
SDF2-205ENST00000587629 OVOS2A0A0J9YW53 1432 aa9.14□□□□□ -0.95
SDF2-205ENST00000587629 CPSF1Q10570 1443 aaKnown RBP9.14□□□□□ -0.95
SDF2-205ENST00000587629 OVOS2Q6IE36 1432 aa9.14□□□□□ -0.95
SDF2-205ENST00000587629 TTC21AQ8NDW8 1320 aa9.13□□□□□ -0.95
SDF2-205ENST00000587629 NME9Q86XW9 330 aa9.13□□□□□ -0.95
SDF2-205ENST00000587629 CARD10Q9BWT7 1032 aa9.13□□□□□ -0.95
SDF2-205ENST00000587629 CARD11Q9BXL7 1154 aa9.13□□□□□ -0.95
SDF2-205ENST00000587629 BCL11BQ9C0K0 894 aaPredicted RBP9.13□□□□□ -0.95
SDF2-205ENST00000587629 PPP1R1BQ9UD71 204 aaPredicted RBP9.13□□□□□ -0.95
SDF2-205ENST00000587629 PARP4Q9UKK3 1724 aaKnown RBP9.13□□□□□ -0.95
SDF2-205ENST00000587629 NUP188Q5SRE5 1749 aa9.12□□□□□ -0.95
SDF2-205ENST00000587629 C11orf95C9JLR9 678 aaPredicted RBP9.12□□□□□ -0.95
SDF2-205ENST00000587629 EXOC5O00471 708 aa9.12□□□□□ -0.95
SDF2-205ENST00000587629 PDGFDQ9GZP0 370 aaPredicted RBP9.12□□□□□ -0.95
SDF2-205ENST00000587629 SLC12A5Q9H2X9 1139 aa9.12□□□□□ -0.95
SDF2-205ENST00000587629 SPON1Q9HCB6 807 aa9.12□□□□□ -0.95
SDF2-205ENST00000587629 COL18A1P39060 1754 aa9.12□□□□□ -0.95
SDF2-205ENST00000587629 RREB1Q92766 1687 aa9.11□□□□□ -0.95
SDF2-205ENST00000587629 PLSCR1O15162 318 aa9.11□□□□□ -0.95
SDF2-205ENST00000587629 KCNQ2O43526 872 aa9.11□□□□□ -0.95
SDF2-205ENST00000587629 PROM2Q8N271 834 aa9.11□□□□□ -0.95
SDF2-205ENST00000587629 CDCA7Q9BWT1 371 aaPredicted RBP9.11□□□□□ -0.95
SDF2-205ENST00000587629 ANO8Q9HCE9 1232 aaPredicted RBP9.11□□□□□ -0.95
SDF2-205ENST00000587629 NLRP2Q9NX02 1062 aa9.11□□□□□ -0.95
SDF2-205ENST00000587629 LRRC37A3O60309 1634 aa9.11□□□□□ -0.95
SDF2-205ENST00000587629 PEAK1Q9H792 1746 aa9.11□□□□□ -0.95
SDF2-205ENST00000587629 RGPD5Q99666 1765 aa9.1□□□□□ -0.95
SDF2-205ENST00000587629 HAX1O00165 279 aa9.1□□□□□ -0.95
SDF2-205ENST00000587629 ZBTB7AO95365 584 aa9.1□□□□□ -0.95
SDF2-205ENST00000587629 ACSBG1Q96GR2 724 aa9.1□□□□□ -0.95
SDF2-205ENST00000587629 AKAP12Q02952 1782 aa9.09□□□□□ -0.95
SDF2-205ENST00000587629 HDGFL2Q7Z4V5 671 aaPredicted RBP9.09□□□□□ -0.95
SDF2-205ENST00000587629 NFAT5O94916 1531 aa9.09□□□□□ -0.95
SDF2-205ENST00000587629 MYCNP04198 464 aaPredicted RBP9.08□□□□□ -0.96
SDF2-205ENST00000587629 TXNRD1Q16881 649 aa9.08□□□□□ -0.96
SDF2-205ENST00000587629 ANKRD24Q8TF21 1146 aa9.08□□□□□ -0.96
SDF2-205ENST00000587629 LTV1Q96GA3 475 aaPredicted RBP9.08□□□□□ -0.96
SDF2-205ENST00000587629 ATF5Q9Y2D1 282 aaPredicted RBP9.08□□□□□ -0.96
SDF2-205ENST00000587629 TONSLQ96HA7 1378 aa9.08□□□□□ -0.96
SDF2-205ENST00000587629 SBNO2Q9Y2G9 1366 aa9.08□□□□□ -0.96
SDF2-205ENST00000587629 CD163L1Q9NR16 1453 aa9.08□□□□□ -0.96
SDF2-205ENST00000587629 SBF2Q86WG5 1849 aa9.08□□□□□ -0.96
SDF2-205ENST00000587629 YY1P25490 414 aa9.07□□□□□ -0.96
SDF2-205ENST00000587629 PIP4P2Q8N4L2 257 aa9.07□□□□□ -0.96
SDF2-205ENST00000587629 STK32BQ9NY57 414 aa9.07□□□□□ -0.96
SDF2-205ENST00000587629 TERF2IPQ9NYB0 399 aa9.07□□□□□ -0.96
SDF2-205ENST00000587629 USP31Q70CQ4 1352 aa9.07□□□□□ -0.96
SDF2-205ENST00000587629 CCDC7Q96M83 1385 aa9.07□□□□□ -0.96
SDF2-205ENST00000587629 ERBB3P21860 1342 aa9.06□□□□□ -0.96
SDF2-205ENST00000587629 IL2RBP14784 551 aa9.06□□□□□ -0.96
SDF2-205ENST00000587629 FBLN1P23142 703 aa9.06□□□□□ -0.96
SDF2-205ENST00000587629 DDX54Q8TDD1 881 aaKnown RBP9.06□□□□□ -0.96
SDF2-205ENST00000587629 MON2Q7Z3U7 1717 aa9.05□□□□□ -0.96
SDF2-205ENST00000587629 WNK3Q9BYP7 1800 aa9.05□□□□□ -0.96
SDF2-205ENST00000587629 A0A1W2PP64 1363 aa9.05□□□□□ -0.96
SDF2-205ENST00000587629 ST20-MTHFSA0A0A6YYL1 179 aa9.05□□□□□ -0.96
SDF2-205ENST00000587629 SLC15A2Q16348 729 aa9.05□□□□□ -0.96
SDF2-205ENST00000587629 BCL9O00512 1426 aa9.05□□□□□ -0.96
SDF2-205ENST00000587629 TNS2Q63HR2 1409 aa9.05□□□□□ -0.96
SDF2-205ENST00000587629 EDC4Q6P2E9 1401 aaKnown RBP9.05□□□□□ -0.96
SDF2-205ENST00000587629 PTGER2P43116 358 aa9.04□□□□□ -0.96
SDF2-205ENST00000587629 IP6K1Q92551 441 aa9.04□□□□□ -0.96
SDF2-205ENST00000587629 AKT1S1Q96B36 256 aa9.04□□□□□ -0.96
SDF2-205ENST00000587629 NINLQ9Y2I6 1382 aa9.03□□□□□ -0.96
SDF2-205ENST00000587629 SYTL4Q96C24 671 aaPredicted RBP9.03□□□□□ -0.96
SDF2-205ENST00000587629 COG3Q96JB2 828 aa9.03□□□□□ -0.96
SDF2-205ENST00000587629 TESK2Q96S53 571 aa9.03□□□□□ -0.96
SDF2-205ENST00000587629 RGPD3A6NKT7 1758 aaPredicted RBP9.03□□□□□ -0.96
SDF2-205ENST00000587629 LTN1O94822 1766 aa9.03□□□□□ -0.96
SDF2-205ENST00000587629 RGPD4Q7Z3J3 1758 aa9.03□□□□□ -0.96
SDF2-205ENST00000587629 ABCC6O95255 1503 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms