RNA–Protein interactions for RNA: ENST00000586287.1

TREM1-203, Transcript of triggering receptor expressed on myeloid cells 1, humanhuman

TSL 2

Gene TREM1, Length 574 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREM1-203ENST00000586287 KIAA0232Q92628 1395 aa11.06□□□□□ -0.64
TREM1-203ENST00000586287 AMPHP49418 695 aa11.06□□□□□ -0.64
TREM1-203ENST00000586287 RTL1A6NKG5 1358 aa11.05□□□□□ -0.64
TREM1-203ENST00000586287 FLT4P35916 1363 aa11.05□□□□□ -0.64
TREM1-203ENST00000586287 FAM83GA6ND36 823 aa11.05□□□□□ -0.64
TREM1-203ENST00000586287 IL13P35225 146 aa11.05□□□□□ -0.64
TREM1-203ENST00000586287 HAP1P54257 671 aaPredicted RBP11.05□□□□□ -0.64
TREM1-203ENST00000586287 CHRNA2Q15822 529 aa11.05□□□□□ -0.64
TREM1-203ENST00000586287 PNISRQ8TF01 805 aaKnown RBP11.05□□□□□ -0.64
TREM1-203ENST00000586287 COL18A1P39060 1754 aa11.05□□□□□ -0.64
TREM1-203ENST00000586287 SPATA31A6Q5VVP1 1343 aa11.05□□□□□ -0.64
TREM1-203ENST00000586287 LTN1O94822 1766 aa11.04□□□□□ -0.64
TREM1-203ENST00000586287 ZBTB7CA1YPR0 619 aa11.04□□□□□ -0.64
TREM1-203ENST00000586287 NUTM2BA6NNL0 878 aaPredicted RBP11.04□□□□□ -0.64
TREM1-203ENST00000586287 NUTM2EB1AL46 878 aaPredicted RBP11.04□□□□□ -0.64
TREM1-203ENST00000586287 EIF4A2Q14240 407 aaKnown RBP11.04□□□□□ -0.64
TREM1-203ENST00000586287 NUTM2AQ8IVF1 878 aaPredicted RBP11.04□□□□□ -0.64
TREM1-203ENST00000586287 CFAP53Q96M91 514 aa11.04□□□□□ -0.64
TREM1-203ENST00000586287 PRDM11Q9NQV5 511 aa11.04□□□□□ -0.64
TREM1-203ENST00000586287 LRP6O75581 1613 aa11.03□□□□□ -0.64
TREM1-203ENST00000586287 DIAPH1O60610 1272 aaKnown RBP11.03□□□□□ -0.64
TREM1-203ENST00000586287 LMO7Q8WWI1 1683 aa11.02□□□□□ -0.64
TREM1-203ENST00000586287 ADAMTS2O95450 1211 aa11.02□□□□□ -0.65
TREM1-203ENST00000586287 ABCC6O95255 1503 aa11.02□□□□□ -0.65
TREM1-203ENST00000586287 CAMTA1Q9Y6Y1 1673 aa11.01□□□□□ -0.65
TREM1-203ENST00000586287 BLMP54132 1417 aaPredicted RBP11.01□□□□□ -0.65
TREM1-203ENST00000586287 ERBB3P21860 1342 aa11.01□□□□□ -0.65
TREM1-203ENST00000586287 ANKRD24Q8TF21 1146 aa11□□□□□ -0.65
TREM1-203ENST00000586287 LTV1Q96GA3 475 aaPredicted RBP11□□□□□ -0.65
TREM1-203ENST00000586287 EYA1Q99502 592 aa11□□□□□ -0.65
TREM1-203ENST00000586287 ADAMTS8Q9UP79 889 aa11□□□□□ -0.65
TREM1-203ENST00000586287 RGPD5Q99666 1765 aa10.99□□□□□ -0.65
TREM1-203ENST00000586287 NBPF6Q5VWK0 638 aa10.99□□□□□ -0.65
TREM1-203ENST00000586287 FAM9BQ8IZU0 186 aa10.99□□□□□ -0.65
TREM1-203ENST00000586287 NBPF4Q96M43 638 aa10.99□□□□□ -0.65
TREM1-203ENST00000586287 BTG4Q9NY30 223 aa10.99□□□□□ -0.65
TREM1-203ENST00000586287 NUDCQ9Y266 331 aa10.99□□□□□ -0.65
TREM1-203ENST00000586287 COL5A2P05997 1499 aaPredicted RBP10.99□□□□□ -0.65
TREM1-203ENST00000586287 SLIT2O94813 1529 aa10.99□□□□□ -0.65
TREM1-203ENST00000586287 COL14A1Q05707 1796 aaKnown RBP10.98□□□□□ -0.65
TREM1-203ENST00000586287 FNBP4Q8N3X1 1017 aaPredicted RBP10.98□□□□□ -0.65
TREM1-203ENST00000586287 IGSF1Q8N6C5 1336 aa10.98□□□□□ -0.65
TREM1-203ENST00000586287 RGPD1P0DJD0 1748 aa10.98□□□□□ -0.65
TREM1-203ENST00000586287 U2SURPO15042 1029 aaKnown RBP10.97□□□□□ -0.65
TREM1-203ENST00000586287 U2AF1L5P0DN76 240 aaPredicted RBP10.97□□□□□ -0.65
TREM1-203ENST00000586287 U2AF1Q01081 240 aaKnown RBP eCLIP10.97□□□□□ -0.65
TREM1-203ENST00000586287 WDR43Q15061 677 aaKnown RBP eCLIP10.97□□□□□ -0.65
TREM1-203ENST00000586287 AEBP1Q8IUX7 1158 aa10.97□□□□□ -0.65
TREM1-203ENST00000586287 C8orf37Q96NL8 207 aa10.97□□□□□ -0.65
TREM1-203ENST00000586287 WDR17Q8IZU2 1322 aa10.97□□□□□ -0.65
TREM1-203ENST00000586287 NCAPD2Q15021 1401 aa10.97□□□□□ -0.65
TREM1-203ENST00000586287 BCL9LQ86UU0 1499 aa10.96□□□□□ -0.65
TREM1-203ENST00000586287 KDRP35968 1356 aa10.96□□□□□ -0.65
TREM1-203ENST00000586287 HMOX1P09601 288 aa10.96□□□□□ -0.65
TREM1-203ENST00000586287 LARP1Q6PKG0 1096 aaKnown RBP10.96□□□□□ -0.65
TREM1-203ENST00000586287 NGLY1Q96IV0 654 aa10.96□□□□□ -0.65
TREM1-203ENST00000586287 PLEKHF1Q96S99 279 aa10.96□□□□□ -0.65
TREM1-203ENST00000586287 RSPH6AQ9H0K4 717 aa10.96□□□□□ -0.65
TREM1-203ENST00000586287 FCHSD2O94868 740 aa10.95□□□□□ -0.66
TREM1-203ENST00000586287 EVA1CP58658 441 aa10.95□□□□□ -0.66
TREM1-203ENST00000586287 SULT6B1Q6IMI4 303 aa10.95□□□□□ -0.66
TREM1-203ENST00000586287 USHBP1Q8N6Y0 703 aa10.95□□□□□ -0.66
TREM1-203ENST00000586287 STRN4Q9NRL3 753 aa10.95□□□□□ -0.66
TREM1-203ENST00000586287 RGS17Q9UGC6 210 aaPredicted RBP10.95□□□□□ -0.66
TREM1-203ENST00000586287 PLCH1Q4KWH8 1693 aa10.95□□□□□ -0.66
TREM1-203ENST00000586287 CSB-PGBD3P0DP91 1061 aa10.94□□□□□ -0.66
TREM1-203ENST00000586287 TOM1L2Q6ZVM7 507 aa10.94□□□□□ -0.66
TREM1-203ENST00000586287 UNC5CLQ8IV45 518 aa10.94□□□□□ -0.66
TREM1-203ENST00000586287 NLRP2Q9NX02 1062 aa10.94□□□□□ -0.66
TREM1-203ENST00000586287 RGPD2P0DJD1 1756 aa10.94□□□□□ -0.66
TREM1-203ENST00000586287 NRAPQ86VF7 1730 aa10.94□□□□□ -0.66
TREM1-203ENST00000586287 FAM208AQ9UK61 1670 aaKnown RBP10.93□□□□□ -0.66
TREM1-203ENST00000586287 PRKAR2BP31323 418 aa10.93□□□□□ -0.66
TREM1-203ENST00000586287 MEX3CQ5U5Q3 659 aaKnown RBP10.93□□□□□ -0.66
TREM1-203ENST00000586287 CCDC146Q8IYE0 955 aa10.93□□□□□ -0.66
TREM1-203ENST00000586287 CARD10Q9BWT7 1032 aa10.93□□□□□ -0.66
TREM1-203ENST00000586287 CRB1P82279 1406 aa10.92□□□□□ -0.66
TREM1-203ENST00000586287 NWD2Q9ULI1 1742 aa10.92□□□□□ -0.66
TREM1-203ENST00000586287 AFF2P51816 1311 aa10.92□□□□□ -0.66
TREM1-203ENST00000586287 RUNDC1Q96C34 613 aa10.92□□□□□ -0.66
TREM1-203ENST00000586287 PHACTR3Q96KR7 559 aa10.92□□□□□ -0.66
TREM1-203ENST00000586287 USP21Q9UK80 565 aa10.92□□□□□ -0.66
TREM1-203ENST00000586287 SPATA31A1Q5TZJ5 1347 aa10.91□□□□□ -0.66
TREM1-203ENST00000586287 SPATA31A5Q5VU36 1347 aa10.91□□□□□ -0.66
TREM1-203ENST00000586287 SPATA31A7Q8IWB4 1347 aa10.91□□□□□ -0.66
TREM1-203ENST00000586287 VPS72Q15906 364 aa10.91□□□□□ -0.66
TREM1-203ENST00000586287 APAF1O14727 1248 aa10.9□□□□□ -0.66
TREM1-203ENST00000586287 USP35Q9P2H5 1018 aa10.9□□□□□ -0.66
TREM1-203ENST00000586287 SENP3-EIF4A1A0A087X0R7 540 aa10.89□□□□□ -0.67
TREM1-203ENST00000586287 TCP11L2Q8N4U5 519 aa10.89□□□□□ -0.67
TREM1-203ENST00000586287 PNNQ9H307 717 aaKnown RBP10.89□□□□□ -0.67
TREM1-203ENST00000586287 DISP2A7MBM2 1401 aa10.89□□□□□ -0.67
TREM1-203ENST00000586287 ATRNO75882 1429 aa10.89□□□□□ -0.67
TREM1-203ENST00000586287 MEGF6O75095 1541 aa10.89□□□□□ -0.67
TREM1-203ENST00000586287 TMPOP42166 694 aaKnown RBP10.88□□□□□ -0.67
TREM1-203ENST00000586287 MTHFSDQ2M296 383 aaKnown RBP10.88□□□□□ -0.67
TREM1-203ENST00000586287 TNKS1BP1Q9C0C2 1729 aaKnown RBP10.88□□□□□ -0.67
TREM1-203ENST00000586287 THRAP3Q9Y2W1 955 aaKnown RBP10.88□□□□□ -0.67
TREM1-203ENST00000586287 OVOS2A0A0G2JMS6 1433 aa10.87□□□□□ -0.67
TREM1-203ENST00000586287 IL2RBP14784 551 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms