RNA–Protein interactions for RNA: ENST00000586193.5

TPM4-203, Transcript of tropomyosin 4, humanhuman

TSL 3

Gene TPM4, Length 545 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-203ENST00000586193 GPSM3Q9Y4H4 160 aa9.94□□□□□ -0.82
TPM4-203ENST00000586193 ZBTB7BO15156 539 aaPredicted RBP9.93□□□□□ -0.82
TPM4-203ENST00000586193 DKK1O94907 266 aa9.93□□□□□ -0.82
TPM4-203ENST00000586193 JUNDP17535 347 aa9.93□□□□□ -0.82
TPM4-203ENST00000586193 CDK11BP21127 795 aaKnown RBP9.93□□□□□ -0.82
TPM4-203ENST00000586193 DMRTA1Q5VZB9 504 aa9.93□□□□□ -0.82
TPM4-203ENST00000586193 TAS1R3Q7RTX0 852 aa9.93□□□□□ -0.82
TPM4-203ENST00000586193 LARGE2Q8N3Y3 721 aa9.93□□□□□ -0.82
TPM4-203ENST00000586193 CDK11AQ9UQ88 783 aaPredicted RBP9.93□□□□□ -0.82
TPM4-203ENST00000586193 ICMTO60725 284 aa9.92□□□□□ -0.82
TPM4-203ENST00000586193 VAMP1P23763 118 aa9.92□□□□□ -0.82
TPM4-203ENST00000586193 MAPK1P28482 360 aa9.92□□□□□ -0.82
TPM4-203ENST00000586193 OCLNQ16625 522 aa9.92□□□□□ -0.82
TPM4-203ENST00000586193 FBXO33Q7Z6M2 555 aa9.92□□□□□ -0.82
TPM4-203ENST00000586193 GLYCTKQ8IVS8 523 aa9.92□□□□□ -0.82
TPM4-203ENST00000586193 DRC1Q96MC2 740 aa9.92□□□□□ -0.82
TPM4-203ENST00000586193 ARHGAP33O14559 1287 aa9.91□□□□□ -0.82
TPM4-203ENST00000586193 LAPTM4BQ86VI4 370 aa9.91□□□□□ -0.82
TPM4-203ENST00000586193 C8orf37Q96NL8 207 aa9.91□□□□□ -0.82
TPM4-203ENST00000586193 SALL2Q9Y467 1007 aaPredicted RBP9.91□□□□□ -0.82
TPM4-203ENST00000586193 SEC13P55735 322 aa9.9□□□□□ -0.82
TPM4-203ENST00000586193 POTEEQ6S8J3 1075 aa9.9□□□□□ -0.82
TPM4-203ENST00000586193 SIX5Q8N196 739 aa9.9□□□□□ -0.82
TPM4-203ENST00000586193 ARMC2Q8NEN0 867 aa9.9□□□□□ -0.82
TPM4-203ENST00000586193 ADAM32Q8TC27 787 aa9.9□□□□□ -0.82
TPM4-203ENST00000586193 ZFRQ96KR1 1074 aaKnown RBP9.9□□□□□ -0.82
TPM4-203ENST00000586193 VPS9D1Q9Y2B5 631 aa9.9□□□□□ -0.82
TPM4-203ENST00000586193 AXIN2Q9Y2T1 843 aa9.9□□□□□ -0.82
TPM4-203ENST00000586193 LGR5O75473 907 aa9.89□□□□□ -0.83
TPM4-203ENST00000586193 FMNL1O95466 1100 aaPredicted RBP9.89□□□□□ -0.83
TPM4-203ENST00000586193 SREK1Q8WXA9 508 aaKnown RBP9.89□□□□□ -0.83
TPM4-203ENST00000586193 GPKOWQ92917 476 aaPredicted RBP eCLIP9.89□□□□□ -0.832e-6■□□□□ 10.5
TPM4-203ENST00000586193 DOLKQ9UPQ8 538 aa9.89□□□□□ -0.83
TPM4-203ENST00000586193 RBM19Q9Y4C8 960 aaKnown RBP9.89□□□□□ -0.83
TPM4-203ENST00000586193 SFI1A8K8P3 1242 aa9.88□□□□□ -0.83
TPM4-203ENST00000586193 RECKO95980 971 aa9.88□□□□□ -0.83
TPM4-203ENST00000586193 GTF2IP78347 998 aa9.88□□□□□ -0.83
TPM4-203ENST00000586193 OXLD1Q5BKU9 147 aa9.88□□□□□ -0.83
TPM4-203ENST00000586193 SCUBE3Q8IX30 993 aa9.88□□□□□ -0.83
TPM4-203ENST00000586193 THAP11Q96EK4 314 aa9.88□□□□□ -0.83
TPM4-203ENST00000586193 ASB16Q96NS5 453 aa9.88□□□□□ -0.83
TPM4-203ENST00000586193 CCDC85AQ96PX6 553 aaPredicted RBP9.88□□□□□ -0.83
TPM4-203ENST00000586193 ARHGAP9Q9BRR9 750 aa9.88□□□□□ -0.83
TPM4-203ENST00000586193 EVA1BQ9NVM1 165 aa9.88□□□□□ -0.83
TPM4-203ENST00000586193 CCNYL3P0C7X3 344 aa9.87□□□□□ -0.83
TPM4-203ENST00000586193 ZC3H6P61129 1189 aaKnown RBP9.87□□□□□ -0.83
TPM4-203ENST00000586193 CCDC102BQ68D86 513 aa9.87□□□□□ -0.83
TPM4-203ENST00000586193 GTF3C2Q8WUA4 911 aaPredicted RBP9.87□□□□□ -0.83
TPM4-203ENST00000586193 SEPT3Q9UH03 358 aa9.87□□□□□ -0.83
TPM4-203ENST00000586193 DCTN4Q9UJW0 460 aa9.87□□□□□ -0.83
TPM4-203ENST00000586193 C21orf2O43822 256 aa9.86□□□□□ -0.83
TPM4-203ENST00000586193 ECM1Q16610 540 aa9.86□□□□□ -0.83
TPM4-203ENST00000586193 NBPF14Q5TI25 921 aa9.86□□□□□ -0.83
TPM4-203ENST00000586193 ZBTB33Q86T24 672 aa9.86□□□□□ -0.83
TPM4-203ENST00000586193 TPCN2Q8NHX9 752 aa9.86□□□□□ -0.83
TPM4-203ENST00000586193 PRR14Q9BWN1 585 aa9.86□□□□□ -0.83
TPM4-203ENST00000586193 NBPF3Q9H094 633 aa9.86□□□□□ -0.83
TPM4-203ENST00000586193 SCUBE2Q9NQ36 999 aa9.86□□□□□ -0.83
TPM4-203ENST00000586193 POTEB2H3BUK9 544 aa9.85□□□□□ -0.83
TPM4-203ENST00000586193 MTMR3Q13615 1198 aa9.85□□□□□ -0.83
TPM4-203ENST00000586193 TSNAXIP1Q2TAA8 658 aa9.85□□□□□ -0.83
TPM4-203ENST00000586193 DZIP3Q86Y13 1208 aaKnown RBP9.85□□□□□ -0.83
TPM4-203ENST00000586193 CCDC125Q86Z20 511 aa9.85□□□□□ -0.83
TPM4-203ENST00000586193 ZSCAN29Q8IWY8 852 aaPredicted RBP9.85□□□□□ -0.83
TPM4-203ENST00000586193 LRCH3Q96II8 777 aa9.85□□□□□ -0.83
TPM4-203ENST00000586193 HINFPQ9BQA5 517 aa9.85□□□□□ -0.83
TPM4-203ENST00000586193 MKNK1Q9BUB5 465 aa9.85□□□□□ -0.83
TPM4-203ENST00000586193 DNMT3AQ9Y6K1 912 aaPredicted RBP9.85□□□□□ -0.83
TPM4-203ENST00000586193 SNPHO15079 494 aa9.84□□□□□ -0.83
TPM4-203ENST00000586193 FKBP4Q02790 459 aaKnown RBP eCLIP9.84□□□□□ -0.83
TPM4-203ENST00000586193 NUDT12Q9BQG2 462 aa9.84□□□□□ -0.83
TPM4-203ENST00000586193 PPP1R1BQ9UD71 204 aaPredicted RBP9.84□□□□□ -0.83
TPM4-203ENST00000586193 PSME1Q06323 249 aa9.83□□□□□ -0.84
TPM4-203ENST00000586193 NAALADL2Q58DX5 795 aa9.83□□□□□ -0.84
TPM4-203ENST00000586193 CAPN12Q6ZSI9 719 aa9.83□□□□□ -0.84
TPM4-203ENST00000586193 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.83□□□□□ -0.84
TPM4-203ENST00000586193 BHMG1C9JSJ3 638 aaPredicted RBP9.82□□□□□ -0.84
TPM4-203ENST00000586193 GIGYF1O75420 1035 aaPredicted RBP9.82□□□□□ -0.84
TPM4-203ENST00000586193 NR1I2O75469 434 aa9.82□□□□□ -0.84
TPM4-203ENST00000586193 ARHGAP4P98171 946 aa9.82□□□□□ -0.84
TPM4-203ENST00000586193 EAPPQ56P03 285 aaPredicted RBP9.82□□□□□ -0.84
TPM4-203ENST00000586193 PCDHGA11Q9Y5H2 935 aa9.82□□□□□ -0.84
TPM4-203ENST00000586193 PCDHB3Q9Y5E6 796 aa9.81□□□□□ -0.84
TPM4-203ENST00000586193 DXOO77932 396 aaKnown RBP9.8□□□□□ -0.84
TPM4-203ENST00000586193 APLP1P51693 650 aa9.8□□□□□ -0.84
TPM4-203ENST00000586193 SF3B2Q13435 895 aaKnown RBP9.8□□□□□ -0.84
TPM4-203ENST00000586193 CARD14Q9BXL6 1004 aa9.8□□□□□ -0.84
TPM4-203ENST00000586193 BCL11AQ9H165 835 aa9.8□□□□□ -0.84
TPM4-203ENST00000586193 COL19A1Q14993 1142 aa9.79□□□□□ -0.84
TPM4-203ENST00000586193 VARS2Q5ST30 1063 aaKnown RBP9.79□□□□□ -0.84
TPM4-203ENST00000586193 SH3BP5LQ7L8J4 393 aa9.79□□□□□ -0.84
TPM4-203ENST00000586193 MRPL50Q8N5N7 158 aaKnown RBP9.79□□□□□ -0.84
TPM4-203ENST00000586193 FAM160A2Q8N612 972 aaPredicted RBP9.79□□□□□ -0.84
TPM4-203ENST00000586193 PURBQ96QR8 312 aaKnown RBP9.79□□□□□ -0.84
TPM4-203ENST00000586193 BACH2Q9BYV9 841 aa9.79□□□□□ -0.84
TPM4-203ENST00000586193 ERCC5P28715 1186 aaPredicted RBP9.78□□□□□ -0.84
TPM4-203ENST00000586193 PPP4CP60510 307 aa9.78□□□□□ -0.84
TPM4-203ENST00000586193 FKBP5Q13451 457 aaPredicted RBP9.78□□□□□ -0.84
TPM4-203ENST00000586193 MSS51Q4VC12 460 aa9.78□□□□□ -0.84
TPM4-203ENST00000586193 MAMSTRQ6ZN01 415 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms