RNA–Protein interactions for RNA: ENST00000586002.3

PCSK4-203, Transcript of proprotein convertase subtilisin/kexin type 4, humanhuman

TSL 3

Gene PCSK4, Length 545 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCSK4-203ENST00000586002 ATRNO75882 1429 aa23.81■■□□□ 1.4
PCSK4-203ENST00000586002 KIF20BQ96Q89 1820 aa23.8■■□□□ 1.4
PCSK4-203ENST00000586002 CAMTA1Q9Y6Y1 1673 aa23.79■■□□□ 1.4
PCSK4-203ENST00000586002 NPC1L1Q9UHC9 1359 aa23.79■■□□□ 1.4
PCSK4-203ENST00000586002 TNNT2P45379 298 aaPredicted RBP23.79■■□□□ 1.4
PCSK4-203ENST00000586002 CC2D1BQ5T0F9 858 aaKnown RBP23.79■■□□□ 1.4
PCSK4-203ENST00000586002 NWD2Q9ULI1 1742 aa23.79■■□□□ 1.4
PCSK4-203ENST00000586002 LARP1Q6PKG0 1096 aaKnown RBP23.77■■□□□ 1.4
PCSK4-203ENST00000586002 HOXC9P31274 260 aa23.76■■□□□ 1.39
PCSK4-203ENST00000586002 POLKQ9UBT6 870 aa23.76■■□□□ 1.39
PCSK4-203ENST00000586002 SPATA31A5Q5VU36 1347 aa23.76■■□□□ 1.39
PCSK4-203ENST00000586002 SPATA31A7Q8IWB4 1347 aa23.76■■□□□ 1.39
PCSK4-203ENST00000586002 PLCH1Q4KWH8 1693 aa23.76■■□□□ 1.39
PCSK4-203ENST00000586002 CSB-PGBD3P0DP91 1061 aa23.75■■□□□ 1.39
PCSK4-203ENST00000586002 COL18A1P39060 1754 aa23.74■■□□□ 1.39
PCSK4-203ENST00000586002 PPM1GO15355 546 aaPredicted RBP23.74■■□□□ 1.39
PCSK4-203ENST00000586002 CNGB1Q14028 1251 aaPredicted RBP23.74■■□□□ 1.39
PCSK4-203ENST00000586002 EMILIN1Q9Y6C2 1016 aa23.74■■□□□ 1.39
PCSK4-203ENST00000586002 KIF24Q5T7B8 1368 aa23.74■■□□□ 1.39
PCSK4-203ENST00000586002 LMO7Q8WWI1 1683 aa23.73■■□□□ 1.39
PCSK4-203ENST00000586002 TOM1L2Q6ZVM7 507 aa23.73■■□□□ 1.39
PCSK4-203ENST00000586002 ANKRD24Q8TF21 1146 aa23.73■■□□□ 1.39
PCSK4-203ENST00000586002 SPATA31A1Q5TZJ5 1347 aa23.73■■□□□ 1.39
PCSK4-203ENST00000586002 WDR17Q8IZU2 1322 aa23.73■■□□□ 1.39
PCSK4-203ENST00000586002 TNKS1BP1Q9C0C2 1729 aaKnown RBP23.73■■□□□ 1.39
PCSK4-203ENST00000586002 ILDR2Q71H61 639 aa23.72■■□□□ 1.39
PCSK4-203ENST00000586002 COL5A2P05997 1499 aaPredicted RBP23.72■■□□□ 1.39
PCSK4-203ENST00000586002 ABCC6O95255 1503 aa23.71■■□□□ 1.39
PCSK4-203ENST00000586002 BLMP54132 1417 aaPredicted RBP23.71■■□□□ 1.39
PCSK4-203ENST00000586002 RTL1A6NKG5 1358 aa23.71■■□□□ 1.39
PCSK4-203ENST00000586002 ONECUT3O60422 494 aaPredicted RBP23.71■■□□□ 1.39
PCSK4-203ENST00000586002 ERBB3P21860 1342 aa23.7■■□□□ 1.38
PCSK4-203ENST00000586002 HSP90AB2PQ58FF8 381 aa23.7■■□□□ 1.38
PCSK4-203ENST00000586002 TCP11L2Q8N4U5 519 aa23.7■■□□□ 1.38
PCSK4-203ENST00000586002 LTV1Q96GA3 475 aaPredicted RBP23.7■■□□□ 1.38
PCSK4-203ENST00000586002 CARD10Q9BWT7 1032 aa23.7■■□□□ 1.38
PCSK4-203ENST00000586002 USP35Q9P2H5 1018 aa23.7■■□□□ 1.38
PCSK4-203ENST00000586002 THRAP3Q9Y2W1 955 aaKnown RBP23.7■■□□□ 1.38
PCSK4-203ENST00000586002 FLT4P35916 1363 aa23.69■■□□□ 1.38
PCSK4-203ENST00000586002 NRAPQ86VF7 1730 aa23.69■■□□□ 1.38
PCSK4-203ENST00000586002 LTN1O94822 1766 aa23.68■■□□□ 1.38
PCSK4-203ENST00000586002 ANKRD26Q9UPS8 1709 aa23.68■■□□□ 1.38
PCSK4-203ENST00000586002 NLRP2Q9NX02 1062 aa23.68■■□□□ 1.38
PCSK4-203ENST00000586002 CRB1P82279 1406 aa23.67■■□□□ 1.38
PCSK4-203ENST00000586002 INSRP06213 1382 aa23.67■■□□□ 1.38
PCSK4-203ENST00000586002 FAM98CQ17RN3 349 aaKnown RBP23.67■■□□□ 1.38
PCSK4-203ENST00000586002 BARGINQ6ZT62 677 aa23.67■■□□□ 1.38
PCSK4-203ENST00000586002 MAP2P11137 1827 aaKnown RBP23.66■■□□□ 1.38
PCSK4-203ENST00000586002 CDK12Q9NYV4 1490 aaPredicted RBP23.65■■□□□ 1.38
PCSK4-203ENST00000586002 SEPT12Q8IYM1 358 aa23.65■■□□□ 1.38
PCSK4-203ENST00000586002 RGPD5Q99666 1765 aa23.65■■□□□ 1.38
PCSK4-203ENST00000586002 MTHFSP49914 203 aa23.64■■□□□ 1.37
PCSK4-203ENST00000586002 GLI3P10071 1580 aa23.63■■□□□ 1.37
PCSK4-203ENST00000586002 A0A0G2JS52 829 aa23.62■■□□□ 1.37
PCSK4-203ENST00000586002 MYT1Q01538 1121 aa23.62■■□□□ 1.37
PCSK4-203ENST00000586002 CDCA7Q9BWT1 371 aaPredicted RBP23.61■■□□□ 1.37
PCSK4-203ENST00000586002 NBPF6Q5VWK0 638 aa23.6■■□□□ 1.37
PCSK4-203ENST00000586002 NBPF4Q96M43 638 aa23.6■■□□□ 1.37
PCSK4-203ENST00000586002 SMG6Q86US8 1419 aaKnown RBP23.59■■□□□ 1.37
PCSK4-203ENST00000586002 RALBP1Q15311 655 aa23.59■■□□□ 1.37
PCSK4-203ENST00000586002 PPP2R1AP30153 589 aa23.58■■□□□ 1.37
PCSK4-203ENST00000586002 EIF4A2Q14240 407 aaKnown RBP23.58■■□□□ 1.37
PCSK4-203ENST00000586002 PEAK1Q9H792 1746 aa23.58■■□□□ 1.37
PCSK4-203ENST00000586002 RGS12O14924 1447 aa23.58■■□□□ 1.36
PCSK4-203ENST00000586002 EYA1Q99502 592 aa23.55■■□□□ 1.36
PCSK4-203ENST00000586002 PARD3Q8TEW0 1356 aa23.54■■□□□ 1.36
PCSK4-203ENST00000586002 IL2RBP14784 551 aa23.54■■□□□ 1.36
PCSK4-203ENST00000586002 KRT27Q7Z3Y8 459 aa23.54■■□□□ 1.36
PCSK4-203ENST00000586002 EXOC5O00471 708 aa23.53■■□□□ 1.36
PCSK4-203ENST00000586002 PDE3BQ13370 1112 aa23.53■■□□□ 1.36
PCSK4-203ENST00000586002 DIAPH1O60610 1272 aaKnown RBP23.52■■□□□ 1.36
PCSK4-203ENST00000586002 IL13P35225 146 aa23.52■■□□□ 1.36
PCSK4-203ENST00000586002 DDB1Q16531 1140 aa23.52■■□□□ 1.36
PCSK4-203ENST00000586002 USHBP1Q8N6Y0 703 aa23.52■■□□□ 1.36
PCSK4-203ENST00000586002 CFAP53Q96M91 514 aa23.52■■□□□ 1.36
PCSK4-203ENST00000586002 RAPGEF4Q8WZA2 1011 aa23.5■■□□□ 1.35
PCSK4-203ENST00000586002 PRKRIP1Q9H875 184 aaPredicted RBP23.49■■□□□ 1.35
PCSK4-203ENST00000586002 DISP2A7MBM2 1401 aa23.48■■□□□ 1.35
PCSK4-203ENST00000586002 FAM208AQ9UK61 1670 aaKnown RBP23.48■■□□□ 1.35
PCSK4-203ENST00000586002 TATP17735 454 aaPredicted RBP23.47■■□□□ 1.35
PCSK4-203ENST00000586002 IGSF1Q8N6C5 1336 aa23.46■■□□□ 1.35
PCSK4-203ENST00000586002 THSD7AQ9UPZ6 1657 aa23.45■■□□□ 1.34
PCSK4-203ENST00000586002 NUDCQ9Y266 331 aa23.45■■□□□ 1.34
PCSK4-203ENST00000586002 MYBBP1AQ9BQG0 1328 aaKnown RBP23.44■■□□□ 1.34
PCSK4-203ENST00000586002 ZCRB1Q8TBF4 217 aaKnown RBP23.44■■□□□ 1.34
PCSK4-203ENST00000586002 RGPD2P0DJD1 1756 aa23.43■■□□□ 1.34
PCSK4-203ENST00000586002 SOCS7O14512 581 aa23.43■■□□□ 1.34
PCSK4-203ENST00000586002 FAM196AQ6ZSG2 479 aa23.43■■□□□ 1.34
PCSK4-203ENST00000586002 FAM182BQ5T319 152 aa23.42■■□□□ 1.34
PCSK4-203ENST00000586002 SULT6B1Q6IMI4 303 aa23.42■■□□□ 1.34
PCSK4-203ENST00000586002 NCAPD2Q15021 1401 aa23.42■■□□□ 1.34
PCSK4-203ENST00000586002 BRWD3Q6RI45 1802 aa23.41■■□□□ 1.34
PCSK4-203ENST00000586002 U2SURPO15042 1029 aaKnown RBP23.41■■□□□ 1.34
PCSK4-203ENST00000586002 ANP32CO43423 234 aa23.41■■□□□ 1.34
PCSK4-203ENST00000586002 MARCH10Q8NA82 808 aaPredicted RBP23.41■■□□□ 1.34
PCSK4-203ENST00000586002 DDX54Q8TDD1 881 aaKnown RBP23.4■■□□□ 1.34
PCSK4-203ENST00000586002 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP23.39■■□□□ 1.33
PCSK4-203ENST00000586002 PARP4Q9UKK3 1724 aaKnown RBP23.39■■□□□ 1.33
PCSK4-203ENST00000586002 AEBP1Q8IUX7 1158 aa23.38■■□□□ 1.33
PCSK4-203ENST00000586002 SPG7Q9UQ90 795 aa23.38■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms