RNA–Protein interactions for RNA: ENST00000585735.1

GHDC-205, Transcript of GH3 domain containing, humanhuman

TSL 2

Gene GHDC, Length 940 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GHDC-205ENST00000585735 CCDC61Q9Y6R9 512 aa27.77■■■□□ 2.04
GHDC-205ENST00000585735 CAMTA1Q9Y6Y1 1673 aa27.76■■■□□ 2.03
GHDC-205ENST00000585735 CENPBP07199 599 aaPredicted RBP27.76■■■□□ 2.03
GHDC-205ENST00000585735 PPIP5K1Q6PFW1 1433 aa27.75■■■□□ 2.03
GHDC-205ENST00000585735 CGNL1Q0VF96 1302 aa27.75■■■□□ 2.03
GHDC-205ENST00000585735 PRR36Q9H6K5 1346 aa27.74■■■□□ 2.03
GHDC-205ENST00000585735 NBPF14Q5TI25 921 aa27.74■■■□□ 2.03
GHDC-205ENST00000585735 SPON1Q9HCB6 807 aa27.74■■■□□ 2.03
GHDC-205ENST00000585735 PRDM11Q9NQV5 511 aa27.74■■■□□ 2.03
GHDC-205ENST00000585735 PPP1R1BQ9UD71 204 aaPredicted RBP27.73■■■□□ 2.03
GHDC-205ENST00000585735 NSD2O96028 1365 aa27.73■■■□□ 2.03
GHDC-205ENST00000585735 DCAF8L1A6NGE4 600 aa27.72■■■□□ 2.03
GHDC-205ENST00000585735 KCNQ2O43526 872 aa27.72■■■□□ 2.03
GHDC-205ENST00000585735 PPP2R1AP30153 589 aa27.7■■■□□ 2.02
GHDC-205ENST00000585735 CPSF1Q10570 1443 aaKnown RBP27.68■■■□□ 2.02
GHDC-205ENST00000585735 PHRF1Q9P1Y6 1649 aaKnown RBP27.67■■■□□ 2.02
GHDC-205ENST00000585735 CHRNA2Q15822 529 aa27.67■■■□□ 2.02
GHDC-205ENST00000585735 MORC1Q86VD1 984 aa27.67■■■□□ 2.02
GHDC-205ENST00000585735 FAM9BQ8IZU0 186 aa27.67■■■□□ 2.02
GHDC-205ENST00000585735 STRN4Q9NRL3 753 aa27.67■■■□□ 2.02
GHDC-205ENST00000585735 KIAA0232Q92628 1395 aa27.67■■■□□ 2.02
GHDC-205ENST00000585735 TOPAZ1Q8N9V7 1692 aa27.67■■■□□ 2.02
GHDC-205ENST00000585735 PLEKHG3A1L390 1219 aa27.66■■■□□ 2.02
GHDC-205ENST00000585735 PDE3BQ13370 1112 aa27.65■■■□□ 2.02
GHDC-205ENST00000585735 PNISRQ8TF01 805 aaKnown RBP27.65■■■□□ 2.02
GHDC-205ENST00000585735 PAK3O75914 559 aaPredicted RBP27.64■■■□□ 2.02
GHDC-205ENST00000585735 BARGINQ6ZT62 677 aa27.64■■■□□ 2.02
GHDC-205ENST00000585735 ZNF692Q9BU19 519 aaPredicted RBP27.64■■■□□ 2.02
GHDC-205ENST00000585735 USP35Q9P2H5 1018 aa27.63■■■□□ 2.01
GHDC-205ENST00000585735 CHD4Q14839 1912 aa27.61■■■□□ 2.01
GHDC-205ENST00000585735 EDC4Q6P2E9 1401 aaKnown RBP27.61■■■□□ 2.01
GHDC-205ENST00000585735 ITSN1Q15811 1721 aa27.61■■■□□ 2.01
GHDC-205ENST00000585735 AKAP12Q02952 1782 aa27.6■■■□□ 2.01
GHDC-205ENST00000585735 SBF2Q86WG5 1849 aa27.6■■■□□ 2.01
GHDC-205ENST00000585735 NGDNQ8NEJ9 315 aaKnown RBP27.6■■■□□ 2.01
GHDC-205ENST00000585735 CASZ1Q86V15 1759 aa27.6■■■□□ 2.01
GHDC-205ENST00000585735 FYB1O15117 783 aa27.59■■■□□ 2.01
GHDC-205ENST00000585735 ZNF784Q8NCA9 323 aaPredicted RBP27.59■■■□□ 2.01
GHDC-205ENST00000585735 MON2Q7Z3U7 1717 aa27.58■■■□□ 2.01
GHDC-205ENST00000585735 ZC3H6P61129 1189 aaKnown RBP27.58■■■□□ 2.01
GHDC-205ENST00000585735 RGPD3A6NKT7 1758 aaPredicted RBP27.58■■■□□ 2
GHDC-205ENST00000585735 RGPD4Q7Z3J3 1758 aa27.58■■■□□ 2
GHDC-205ENST00000585735 SSH2Q76I76 1423 aa27.58■■■□□ 2
GHDC-205ENST00000585735 ACEP12821 1306 aa27.57■■■□□ 2
GHDC-205ENST00000585735 PARP4Q9UKK3 1724 aaKnown RBP27.56■■■□□ 2
GHDC-205ENST00000585735 KIF20BQ96Q89 1820 aa27.56■■■□□ 2
GHDC-205ENST00000585735 GGNBP2Q9H3C7 697 aa27.56■■■□□ 2
GHDC-205ENST00000585735 ANKRD26Q9UPS8 1709 aa27.55■■■□□ 2
GHDC-205ENST00000585735 EVA1CP58658 441 aa27.55■■■□□ 2
GHDC-205ENST00000585735 SUGP2Q8IX01 1082 aaKnown RBP eCLIP27.55■■■□□ 2
GHDC-205ENST00000585735 NRKQ7Z2Y5 1582 aa27.55■■■□□ 2
GHDC-205ENST00000585735 HNRNPUQ00839 825 aaKnown RBP eCLIP27.53■■■□□ 2
GHDC-205ENST00000585735 LARP1Q6PKG0 1096 aaKnown RBP27.53■■■□□ 2
GHDC-205ENST00000585735 PEAK1Q9H792 1746 aa27.53■■■□□ 2
GHDC-205ENST00000585735 LMO7Q8WWI1 1683 aa27.52■■■□□ 2
GHDC-205ENST00000585735 POLR3AO14802 1390 aaPredicted RBP27.52■■■□□ 2
GHDC-205ENST00000585735 TCP11L2Q8N4U5 519 aa27.52■■■□□ 2
GHDC-205ENST00000585735 TNNT2P45379 298 aaPredicted RBP27.51■■□□□ 1.99
GHDC-205ENST00000585735 USP6P35125 1406 aa27.5■■□□□ 1.99
GHDC-205ENST00000585735 UTRNP46939 3433 aa27.5■■□□□ 1.99
GHDC-205ENST00000585735 NUTM2GQ5VZR2 741 aa27.5■■□□□ 1.99
GHDC-205ENST00000585735 PDGFDQ9GZP0 370 aaPredicted RBP27.49■■□□□ 1.99
GHDC-205ENST00000585735 ANO8Q9HCE9 1232 aaPredicted RBP27.49■■□□□ 1.99
GHDC-205ENST00000585735 TTC21BQ7Z4L5 1316 aa27.48■■□□□ 1.99
GHDC-205ENST00000585735 SENP3-EIF4A1A0A087X0R7 540 aa27.48■■□□□ 1.99
GHDC-205ENST00000585735 PLSCR1O15162 318 aa27.48■■□□□ 1.99
GHDC-205ENST00000585735 INSRP06213 1382 aa27.48■■□□□ 1.99
GHDC-205ENST00000585735 NME9Q86XW9 330 aa27.47■■□□□ 1.99
GHDC-205ENST00000585735 THRAP3Q9Y2W1 955 aaKnown RBP27.47■■□□□ 1.99
GHDC-205ENST00000585735 PTGER2P43116 358 aa27.45■■□□□ 1.98
GHDC-205ENST00000585735 WDR43Q15061 677 aaKnown RBP eCLIP27.44■■□□□ 1.98
GHDC-205ENST00000585735 TTC21AQ8NDW8 1320 aa27.43■■□□□ 1.98
GHDC-205ENST00000585735 MTHFSP49914 203 aa27.43■■□□□ 1.98
GHDC-205ENST00000585735 C1QTNF8P60827 252 aa27.43■■□□□ 1.98
GHDC-205ENST00000585735 IFFO2Q5TF58 517 aa27.43■■□□□ 1.98
GHDC-205ENST00000585735 COG3Q96JB2 828 aa27.43■■□□□ 1.98
GHDC-205ENST00000585735 CFAP53Q96M91 514 aa27.43■■□□□ 1.98
GHDC-205ENST00000585735 ZBTB7AO95365 584 aa27.42■■□□□ 1.98
GHDC-205ENST00000585735 CPDO75976 1380 aa27.42■■□□□ 1.98
GHDC-205ENST00000585735 OVOS2A0A0G2JMS6 1433 aa27.41■■□□□ 1.98
GHDC-205ENST00000585735 OVOS2A0A0J9YW53 1432 aa27.41■■□□□ 1.98
GHDC-205ENST00000585735 OVOS2Q6IE36 1432 aa27.41■■□□□ 1.98
GHDC-205ENST00000585735 PTF1AQ7RTS3 328 aa27.4■■□□□ 1.98
GHDC-205ENST00000585735 PROM2Q8N271 834 aa27.4■■□□□ 1.98
GHDC-205ENST00000585735 LRRC37A3O60309 1634 aa27.38■■□□□ 1.97
GHDC-205ENST00000585735 SYT17Q9BSW7 474 aa27.38■■□□□ 1.97
GHDC-205ENST00000585735 ATF5Q9Y2D1 282 aaPredicted RBP27.38■■□□□ 1.97
GHDC-205ENST00000585735 ZBED9Q6R2W3 1325 aa27.38■■□□□ 1.97
GHDC-205ENST00000585735 COL5A2P05997 1499 aaPredicted RBP27.38■■□□□ 1.97
GHDC-205ENST00000585735 ADAMTS8Q9UP79 889 aa27.37■■□□□ 1.97
GHDC-205ENST00000585735 FHDC1Q9C0D6 1143 aaPredicted RBP27.36■■□□□ 1.97
GHDC-205ENST00000585735 BCL11BQ9C0K0 894 aaPredicted RBP27.36■■□□□ 1.97
GHDC-205ENST00000585735 AATKQ6ZMQ8 1374 aa27.35■■□□□ 1.97
GHDC-205ENST00000585735 ABTB2Q8N961 1025 aa27.35■■□□□ 1.97
GHDC-205ENST00000585735 USP19O94966 1318 aa27.35■■□□□ 1.97
GHDC-205ENST00000585735 WNK3Q9BYP7 1800 aa27.34■■□□□ 1.97
GHDC-205ENST00000585735 USP31Q70CQ4 1352 aa27.34■■□□□ 1.97
GHDC-205ENST00000585735 CRB1P82279 1406 aa27.33■■□□□ 1.97
GHDC-205ENST00000585735 GCP02774 474 aa27.3■■□□□ 1.96
GHDC-205ENST00000585735 DDB1Q16531 1140 aa27.3■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms