RNA–Protein interactions for RNA: ENST00000585726.5

RETREG3-202, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 4

Gene RETREG3, Length 522 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-202ENST00000585726 CNGB1Q14028 1251 aaPredicted RBP29.37■■■□□ 2.29
RETREG3-202ENST00000585726 RRS1Q15050 365 aaKnown RBP29.37■■■□□ 2.29
RETREG3-202ENST00000585726 PER1O15534 1290 aaPredicted RBP29.35■■■□□ 2.29
RETREG3-202ENST00000585726 LARP1Q6PKG0 1096 aaKnown RBP29.35■■■□□ 2.29
RETREG3-202ENST00000585726 MAP3K19Q56UN5 1328 aa29.35■■■□□ 2.29
RETREG3-202ENST00000585726 AMPHP49418 695 aa29.34■■■□□ 2.29
RETREG3-202ENST00000585726 USP35Q9P2H5 1018 aa29.34■■■□□ 2.29
RETREG3-202ENST00000585726 COL5A2P05997 1499 aaPredicted RBP29.33■■■□□ 2.29
RETREG3-202ENST00000585726 LTN1O94822 1766 aa29.33■■■□□ 2.29
RETREG3-202ENST00000585726 COL18A1P39060 1754 aa29.33■■■□□ 2.29
RETREG3-202ENST00000585726 CSB-PGBD3P0DP91 1061 aa29.32■■■□□ 2.28
RETREG3-202ENST00000585726 AMER1Q5JTC6 1135 aaPredicted RBP29.32■■■□□ 2.28
RETREG3-202ENST00000585726 CC2D1BQ5T0F9 858 aaKnown RBP29.32■■■□□ 2.28
RETREG3-202ENST00000585726 MORC1Q86VD1 984 aa29.32■■■□□ 2.28
RETREG3-202ENST00000585726 NSD2O96028 1365 aa29.31■■■□□ 2.28
RETREG3-202ENST00000585726 SPATA31A5Q5VU36 1347 aa29.3■■■□□ 2.28
RETREG3-202ENST00000585726 SPATA31A7Q8IWB4 1347 aa29.3■■■□□ 2.28
RETREG3-202ENST00000585726 PPM1GO15355 546 aaPredicted RBP29.29■■■□□ 2.28
RETREG3-202ENST00000585726 IP6K1Q92551 441 aa29.29■■■□□ 2.28
RETREG3-202ENST00000585726 GLI3P10071 1580 aa29.29■■■□□ 2.28
RETREG3-202ENST00000585726 HOXC9P31274 260 aa29.28■■■□□ 2.28
RETREG3-202ENST00000585726 TOM1L2Q6ZVM7 507 aa29.28■■■□□ 2.28
RETREG3-202ENST00000585726 LTV1Q96GA3 475 aaPredicted RBP29.28■■■□□ 2.28
RETREG3-202ENST00000585726 RGPD5Q99666 1765 aa29.28■■■□□ 2.28
RETREG3-202ENST00000585726 SPATA31A1Q5TZJ5 1347 aa29.27■■■□□ 2.28
RETREG3-202ENST00000585726 A0A0G2JS52 829 aa29.27■■■□□ 2.28
RETREG3-202ENST00000585726 MYT1Q01538 1121 aa29.27■■■□□ 2.28
RETREG3-202ENST00000585726 EMILIN1Q9Y6C2 1016 aa29.27■■■□□ 2.28
RETREG3-202ENST00000585726 ANKRD26Q9UPS8 1709 aa29.27■■■□□ 2.28
RETREG3-202ENST00000585726 DDX10Q13206 875 aaKnown RBP29.26■■■□□ 2.27
RETREG3-202ENST00000585726 FAM98CQ17RN3 349 aaKnown RBP29.26■■■□□ 2.27
RETREG3-202ENST00000585726 ANKRD24Q8TF21 1146 aa29.26■■■□□ 2.27
RETREG3-202ENST00000585726 WDR17Q8IZU2 1322 aa29.25■■■□□ 2.27
RETREG3-202ENST00000585726 RGS12O14924 1447 aa29.25■■■□□ 2.27
RETREG3-202ENST00000585726 ABCC6O95255 1503 aa29.25■■■□□ 2.27
RETREG3-202ENST00000585726 CRB1P82279 1406 aa29.23■■■□□ 2.27
RETREG3-202ENST00000585726 BLMP54132 1417 aaPredicted RBP29.22■■■□□ 2.27
RETREG3-202ENST00000585726 CDK12Q9NYV4 1490 aaPredicted RBP29.22■■■□□ 2.27
RETREG3-202ENST00000585726 ERBB3P21860 1342 aa29.21■■■□□ 2.27
RETREG3-202ENST00000585726 TCP11L2Q8N4U5 519 aa29.21■■■□□ 2.27
RETREG3-202ENST00000585726 NLRP2Q9NX02 1062 aa29.21■■■□□ 2.27
RETREG3-202ENST00000585726 POLKQ9UBT6 870 aa29.21■■■□□ 2.27
RETREG3-202ENST00000585726 RTL1A6NKG5 1358 aa29.21■■■□□ 2.27
RETREG3-202ENST00000585726 HSP90AB2PQ58FF8 381 aa29.2■■■□□ 2.26
RETREG3-202ENST00000585726 SEPT12Q8IYM1 358 aa29.2■■■□□ 2.26
RETREG3-202ENST00000585726 FLT4P35916 1363 aa29.18■■■□□ 2.26
RETREG3-202ENST00000585726 PEAK1Q9H792 1746 aa29.18■■■□□ 2.26
RETREG3-202ENST00000585726 ZNF316A6NFI3 1004 aaPredicted RBP29.18■■■□□ 2.26
RETREG3-202ENST00000585726 NPC1L1Q9UHC9 1359 aa29.16■■■□□ 2.26
RETREG3-202ENST00000585726 ONECUT3O60422 494 aaPredicted RBP29.16■■■□□ 2.26
RETREG3-202ENST00000585726 CARD10Q9BWT7 1032 aa29.16■■■□□ 2.26
RETREG3-202ENST00000585726 MAP2P11137 1827 aaKnown RBP29.15■■■□□ 2.26
RETREG3-202ENST00000585726 KIF24Q5T7B8 1368 aa29.15■■■□□ 2.26
RETREG3-202ENST00000585726 THRAP3Q9Y2W1 955 aaKnown RBP29.15■■■□□ 2.26
RETREG3-202ENST00000585726 BARGINQ6ZT62 677 aa29.14■■■□□ 2.26
RETREG3-202ENST00000585726 INSRP06213 1382 aa29.13■■■□□ 2.25
RETREG3-202ENST00000585726 SMG6Q86US8 1419 aaKnown RBP29.11■■■□□ 2.25
RETREG3-202ENST00000585726 MTHFSP49914 203 aa29.07■■■□□ 2.24
RETREG3-202ENST00000585726 NBPF6Q5VWK0 638 aa29.07■■■□□ 2.24
RETREG3-202ENST00000585726 KRT27Q7Z3Y8 459 aa29.07■■■□□ 2.24
RETREG3-202ENST00000585726 NBPF4Q96M43 638 aa29.07■■■□□ 2.24
RETREG3-202ENST00000585726 USHBP1Q8N6Y0 703 aa29.06■■■□□ 2.24
RETREG3-202ENST00000585726 THSD7AQ9UPZ6 1657 aa29.05■■■□□ 2.24
RETREG3-202ENST00000585726 EIF4A2Q14240 407 aaKnown RBP29.04■■■□□ 2.24
RETREG3-202ENST00000585726 BRWD3Q6RI45 1802 aa29.04■■■□□ 2.24
RETREG3-202ENST00000585726 FAM208AQ9UK61 1670 aaKnown RBP29.02■■■□□ 2.24
RETREG3-202ENST00000585726 SOCS7O14512 581 aa29.02■■■□□ 2.24
RETREG3-202ENST00000585726 IL2RBP14784 551 aa29.02■■■□□ 2.24
RETREG3-202ENST00000585726 PDE3BQ13370 1112 aa29.02■■■□□ 2.24
RETREG3-202ENST00000585726 FAM182BQ5T319 152 aa29.02■■■□□ 2.24
RETREG3-202ENST00000585726 CDCA7Q9BWT1 371 aaPredicted RBP29.02■■■□□ 2.24
RETREG3-202ENST00000585726 RGPD2P0DJD1 1756 aa29.02■■■□□ 2.24
RETREG3-202ENST00000585726 DDB1Q16531 1140 aa29.01■■■□□ 2.23
RETREG3-202ENST00000585726 DISP2A7MBM2 1401 aa28.99■■■□□ 2.23
RETREG3-202ENST00000585726 PPP2R1AP30153 589 aa28.98■■■□□ 2.23
RETREG3-202ENST00000585726 EYA1Q99502 592 aa28.98■■■□□ 2.23
RETREG3-202ENST00000585726 EXOC5O00471 708 aa28.97■■■□□ 2.23
RETREG3-202ENST00000585726 WNK3Q9BYP7 1800 aa28.97■■■□□ 2.23
RETREG3-202ENST00000585726 PARP4Q9UKK3 1724 aaKnown RBP28.95■■■□□ 2.23
RETREG3-202ENST00000585726 RAPGEF4Q8WZA2 1011 aa28.94■■■□□ 2.22
RETREG3-202ENST00000585726 LRRC37A3O60309 1634 aa28.94■■■□□ 2.22
RETREG3-202ENST00000585726 PARD3Q8TEW0 1356 aa28.93■■■□□ 2.22
RETREG3-202ENST00000585726 IL13P35225 146 aa28.92■■■□□ 2.22
RETREG3-202ENST00000585726 DIAPH1O60610 1272 aaKnown RBP28.91■■■□□ 2.22
RETREG3-202ENST00000585726 TATP17735 454 aaPredicted RBP28.91■■■□□ 2.22
RETREG3-202ENST00000585726 MEGF6O75095 1541 aa28.9■■■□□ 2.22
RETREG3-202ENST00000585726 RALBP1Q15311 655 aa28.9■■■□□ 2.22
RETREG3-202ENST00000585726 UPF1Q92900 1129 aaKnown RBP eCLIP28.9■■■□□ 2.22
RETREG3-202ENST00000585726 CFAP53Q96M91 514 aa28.9■■■□□ 2.22
RETREG3-202ENST00000585726 TNS2Q63HR2 1409 aa28.88■■■□□ 2.21
RETREG3-202ENST00000585726 MARCH10Q8NA82 808 aaPredicted RBP28.88■■■□□ 2.21
RETREG3-202ENST00000585726 IGSF1Q8N6C5 1336 aa28.88■■■□□ 2.21
RETREG3-202ENST00000585726 DDX54Q8TDD1 881 aaKnown RBP28.87■■■□□ 2.21
RETREG3-202ENST00000585726 FAM196AQ6ZSG2 479 aa28.86■■■□□ 2.21
RETREG3-202ENST00000585726 ZCRB1Q8TBF4 217 aaKnown RBP28.86■■■□□ 2.21
RETREG3-202ENST00000585726 SULT6B1Q6IMI4 303 aa28.85■■■□□ 2.21
RETREG3-202ENST00000585726 AEBP1Q8IUX7 1158 aa28.85■■■□□ 2.21
RETREG3-202ENST00000585726 OVOS2A0A0G2JMS6 1433 aa28.85■■■□□ 2.21
RETREG3-202ENST00000585726 U2SURPO15042 1029 aaKnown RBP28.84■■■□□ 2.21
RETREG3-202ENST00000585726 NCAPD2Q15021 1401 aa28.84■■■□□ 2.21
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms