RNA–Protein interactions for RNA: ENST00000585437.1

ATG4D-202, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 377 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-202ENST00000585437 CRB1P82279 1406 aa12.09□□□□□ -0.47
ATG4D-202ENST00000585437 CDCA8Q53HL2 280 aa12.08□□□□□ -0.48
ATG4D-202ENST00000585437 NME9Q86XW9 330 aa12.08□□□□□ -0.48
ATG4D-202ENST00000585437 EIF4G2P78344 907 aaKnown RBP eCLIP12.07□□□□□ -0.48
ATG4D-202ENST00000585437 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.07□□□□□ -0.48
ATG4D-202ENST00000585437 ZRANB1Q9UGI0 708 aa12.07□□□□□ -0.48
ATG4D-202ENST00000585437 HSPA5P11021 654 aaKnown RBP12.06□□□□□ -0.48
ATG4D-202ENST00000585437 SEPT12Q8IYM1 358 aa12.06□□□□□ -0.48
ATG4D-202ENST00000585437 CCDC9Q9Y3X0 531 aaKnown RBP12.06□□□□□ -0.48
ATG4D-202ENST00000585437 MAP2P11137 1827 aaKnown RBP12.06□□□□□ -0.48
ATG4D-202ENST00000585437 SHANK3Q9BYB0 1731 aa12.06□□□□□ -0.48
ATG4D-202ENST00000585437 BLMP54132 1417 aaPredicted RBP12.05□□□□□ -0.48
ATG4D-202ENST00000585437 FAM98CQ17RN3 349 aaKnown RBP12.05□□□□□ -0.48
ATG4D-202ENST00000585437 LARP1Q6PKG0 1096 aaKnown RBP12.05□□□□□ -0.48
ATG4D-202ENST00000585437 BARGINQ6ZT62 677 aa12.05□□□□□ -0.48
ATG4D-202ENST00000585437 AXIN2Q9Y2T1 843 aa12.05□□□□□ -0.48
ATG4D-202ENST00000585437 WDR17Q8IZU2 1322 aa12.05□□□□□ -0.48
ATG4D-202ENST00000585437 RGPD3A6NKT7 1758 aaPredicted RBP12.05□□□□□ -0.48
ATG4D-202ENST00000585437 RGPD4Q7Z3J3 1758 aa12.05□□□□□ -0.48
ATG4D-202ENST00000585437 DISP2A7MBM2 1401 aa12.04□□□□□ -0.48
ATG4D-202ENST00000585437 STRN4Q9NRL3 753 aa12.04□□□□□ -0.48
ATG4D-202ENST00000585437 RREB1Q92766 1687 aa12.03□□□□□ -0.48
ATG4D-202ENST00000585437 NSD3Q9BZ95 1437 aa12.03□□□□□ -0.48
ATG4D-202ENST00000585437 THRAP3Q9Y2W1 955 aaKnown RBP12.03□□□□□ -0.48
ATG4D-202ENST00000585437 KRT27Q7Z3Y8 459 aa12.02□□□□□ -0.49
ATG4D-202ENST00000585437 ERBB3P21860 1342 aa12.02□□□□□ -0.49
ATG4D-202ENST00000585437 RTL1A6NKG5 1358 aa12.02□□□□□ -0.49
ATG4D-202ENST00000585437 FYB1O15117 783 aa12.01□□□□□ -0.49
ATG4D-202ENST00000585437 EVA1CP58658 441 aa12.01□□□□□ -0.49
ATG4D-202ENST00000585437 TCP11L2Q8N4U5 519 aa12.01□□□□□ -0.49
ATG4D-202ENST00000585437 CARD14Q9BXL6 1004 aa12.01□□□□□ -0.49
ATG4D-202ENST00000585437 SOX12O15370 315 aa12□□□□□ -0.49
ATG4D-202ENST00000585437 CCDC125Q86Z20 511 aa12□□□□□ -0.49
ATG4D-202ENST00000585437 COG3Q96JB2 828 aa12□□□□□ -0.49
ATG4D-202ENST00000585437 CCDC7Q96M83 1385 aa12□□□□□ -0.49
ATG4D-202ENST00000585437 NHSQ6T4R5 1651 aa12□□□□□ -0.49
ATG4D-202ENST00000585437 ZBTB7CA1YPR0 619 aa11.99□□□□□ -0.49
ATG4D-202ENST00000585437 KIF24Q5T7B8 1368 aa11.99□□□□□ -0.49
ATG4D-202ENST00000585437 TNS2Q63HR2 1409 aa11.99□□□□□ -0.49
ATG4D-202ENST00000585437 NUP188Q5SRE5 1749 aa11.99□□□□□ -0.49
ATG4D-202ENST00000585437 MAP3K19Q56UN5 1328 aa11.98□□□□□ -0.49
ATG4D-202ENST00000585437 C11orf95C9JLR9 678 aaPredicted RBP11.98□□□□□ -0.49
ATG4D-202ENST00000585437 CARD10Q9BWT7 1032 aa11.98□□□□□ -0.49
ATG4D-202ENST00000585437 USP35Q9P2H5 1018 aa11.98□□□□□ -0.49
ATG4D-202ENST00000585437 PKD1L3Q7Z443 1732 aa11.97□□□□□ -0.49
ATG4D-202ENST00000585437 OVOS2A0A0G2JMS6 1433 aa11.97□□□□□ -0.49
ATG4D-202ENST00000585437 BCL9O00512 1426 aa11.97□□□□□ -0.49
ATG4D-202ENST00000585437 A0A0G2JS52 829 aa11.97□□□□□ -0.49
ATG4D-202ENST00000585437 MYT1Q01538 1121 aa11.97□□□□□ -0.49
ATG4D-202ENST00000585437 TOM1L2Q6ZVM7 507 aa11.97□□□□□ -0.49
ATG4D-202ENST00000585437 GGNBP2Q9H3C7 697 aa11.97□□□□□ -0.49
ATG4D-202ENST00000585437 SMG6Q86US8 1419 aaKnown RBP11.96□□□□□ -0.49
ATG4D-202ENST00000585437 NSD2O96028 1365 aa11.96□□□□□ -0.49
ATG4D-202ENST00000585437 KIF7Q2M1P5 1343 aa11.96□□□□□ -0.49
ATG4D-202ENST00000585437 IP6K1Q92551 441 aa11.96□□□□□ -0.49
ATG4D-202ENST00000585437 NCAPD2Q15021 1401 aa11.95□□□□□ -0.5
ATG4D-202ENST00000585437 FLT4P35916 1363 aa11.95□□□□□ -0.5
ATG4D-202ENST00000585437 DOT1LQ8TEK3 1739 aa11.95□□□□□ -0.5
ATG4D-202ENST00000585437 SRCAPQ6ZRS2 3230 aa11.95□□□□□ -0.5
ATG4D-202ENST00000585437 CGNL1Q0VF96 1302 aa11.95□□□□□ -0.5
ATG4D-202ENST00000585437 HOXC9P31274 260 aa11.95□□□□□ -0.5
ATG4D-202ENST00000585437 CDCA7Q9BWT1 371 aaPredicted RBP11.95□□□□□ -0.5
ATG4D-202ENST00000585437 INSRP06213 1382 aa11.94□□□□□ -0.5
ATG4D-202ENST00000585437 FAM182BQ5T319 152 aa11.94□□□□□ -0.5
ATG4D-202ENST00000585437 ANKRD24Q8TF21 1146 aa11.94□□□□□ -0.5
ATG4D-202ENST00000585437 BTAF1O14981 1849 aa11.94□□□□□ -0.5
ATG4D-202ENST00000585437 FBLN1P23142 703 aa11.93□□□□□ -0.5
ATG4D-202ENST00000585437 MEGF6O75095 1541 aa11.92□□□□□ -0.5
ATG4D-202ENST00000585437 CSB-PGBD3P0DP91 1061 aa11.92□□□□□ -0.5
ATG4D-202ENST00000585437 RRS1Q15050 365 aaKnown RBP11.92□□□□□ -0.5
ATG4D-202ENST00000585437 FAM196AQ6ZSG2 479 aa11.92□□□□□ -0.5
ATG4D-202ENST00000585437 PDE3BQ13370 1112 aa11.91□□□□□ -0.5
ATG4D-202ENST00000585437 DDB1Q16531 1140 aa11.91□□□□□ -0.5
ATG4D-202ENST00000585437 PANK3Q9H999 370 aa11.91□□□□□ -0.5
ATG4D-202ENST00000585437 TOGARAM1Q9Y4F4 1720 aa11.91□□□□□ -0.5
ATG4D-202ENST00000585437 AMPHP49418 695 aa11.9□□□□□ -0.5
ATG4D-202ENST00000585437 POLR3GLQ9BT43 218 aa11.9□□□□□ -0.5
ATG4D-202ENST00000585437 NLRP2Q9NX02 1062 aa11.9□□□□□ -0.5
ATG4D-202ENST00000585437 PARD3Q8TEW0 1356 aa11.9□□□□□ -0.5
ATG4D-202ENST00000585437 WASHC2AQ641Q2 1341 aa11.89□□□□□ -0.51
ATG4D-202ENST00000585437 LY75O60449 1722 aa11.89□□□□□ -0.51
ATG4D-202ENST00000585437 ITGB4P16144 1822 aa11.89□□□□□ -0.51
ATG4D-202ENST00000585437 IL2RBP14784 551 aa11.89□□□□□ -0.51
ATG4D-202ENST00000585437 DEFB132Q7Z7B7 95 aa11.89□□□□□ -0.51
ATG4D-202ENST00000585437 MARCH10Q8NA82 808 aaPredicted RBP11.89□□□□□ -0.51
ATG4D-202ENST00000585437 EMILIN1Q9Y6C2 1016 aa11.89□□□□□ -0.51
ATG4D-202ENST00000585437 LRP5O75197 1615 aa11.89□□□□□ -0.51
ATG4D-202ENST00000585437 BAG6P46379 1132 aa11.88□□□□□ -0.51
ATG4D-202ENST00000585437 SF3B2Q13435 895 aaKnown RBP11.88□□□□□ -0.51
ATG4D-202ENST00000585437 HSP90AB2PQ58FF8 381 aa11.88□□□□□ -0.51
ATG4D-202ENST00000585437 PAPPAQ13219 1627 aa11.88□□□□□ -0.51
ATG4D-202ENST00000585437 VIRMAQ69YN4 1812 aaKnown RBP11.88□□□□□ -0.51
ATG4D-202ENST00000585437 PER1O15534 1290 aaPredicted RBP11.87□□□□□ -0.51
ATG4D-202ENST00000585437 TRIM37O94972 964 aa11.87□□□□□ -0.51
ATG4D-202ENST00000585437 AMER1Q5JTC6 1135 aaPredicted RBP11.87□□□□□ -0.51
ATG4D-202ENST00000585437 PLEKHG2Q9H7P9 1386 aa11.87□□□□□ -0.51
ATG4D-202ENST00000585437 NPC1L1Q9UHC9 1359 aa11.87□□□□□ -0.51
ATG4D-202ENST00000585437 LTV1Q96GA3 475 aaPredicted RBP11.86□□□□□ -0.51
ATG4D-202ENST00000585437 POLKQ9UBT6 870 aa11.86□□□□□ -0.51
ATG4D-202ENST00000585437 QSER1Q2KHR3 1735 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms