RNA–Protein interactions for RNA: ENST00000585333.1

TRIM47-202, Transcript of tripartite motif containing 47, humanhuman

TSL 3

Gene TRIM47, Length 595 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-202ENST00000585333 ZC3H6P61129 1189 aaKnown RBP17.26■□□□□ 0.35
TRIM47-202ENST00000585333 CABLES1Q8TDN4 633 aa17.26■□□□□ 0.35
TRIM47-202ENST00000585333 KIAA0232Q92628 1395 aa17.26■□□□□ 0.35
TRIM47-202ENST00000585333 ZBTB7CA1YPR0 619 aa17.24■□□□□ 0.35
TRIM47-202ENST00000585333 NEFMP07197 916 aa17.24■□□□□ 0.35
TRIM47-202ENST00000585333 COL14A1Q05707 1796 aaKnown RBP17.23■□□□□ 0.35
TRIM47-202ENST00000585333 PLEKHG5O94827 1062 aa17.23■□□□□ 0.35
TRIM47-202ENST00000585333 COL3A1P02461 1466 aaPredicted RBP17.22■□□□□ 0.35
TRIM47-202ENST00000585333 FAM208AQ9UK61 1670 aaKnown RBP17.21■□□□□ 0.35
TRIM47-202ENST00000585333 PNISRQ8TF01 805 aaKnown RBP17.21■□□□□ 0.35
TRIM47-202ENST00000585333 HSP90AB2PQ58FF8 381 aa17.2■□□□□ 0.34
TRIM47-202ENST00000585333 PEAK1Q9H792 1746 aa17.2■□□□□ 0.34
TRIM47-202ENST00000585333 PLEKHG2Q9H7P9 1386 aa17.19■□□□□ 0.34
TRIM47-202ENST00000585333 NUTM2BA6NNL0 878 aaPredicted RBP17.19■□□□□ 0.34
TRIM47-202ENST00000585333 NUTM2EB1AL46 878 aaPredicted RBP17.19■□□□□ 0.34
TRIM47-202ENST00000585333 U2SURPO15042 1029 aaKnown RBP17.19■□□□□ 0.34
TRIM47-202ENST00000585333 FBLN1P23142 703 aa17.19■□□□□ 0.34
TRIM47-202ENST00000585333 IL13P35225 146 aa17.19■□□□□ 0.34
TRIM47-202ENST00000585333 EIF4A2Q14240 407 aaKnown RBP17.19■□□□□ 0.34
TRIM47-202ENST00000585333 MEX3CQ5U5Q3 659 aaKnown RBP17.19■□□□□ 0.34
TRIM47-202ENST00000585333 NUTM2AQ8IVF1 878 aaPredicted RBP17.19■□□□□ 0.34
TRIM47-202ENST00000585333 ERBB3P21860 1342 aa17.19■□□□□ 0.34
TRIM47-202ENST00000585333 FCHSD2O94868 740 aa17.18■□□□□ 0.34
TRIM47-202ENST00000585333 U2AF1L5P0DN76 240 aaPredicted RBP17.18■□□□□ 0.34
TRIM47-202ENST00000585333 CSB-PGBD3P0DP91 1061 aa17.18■□□□□ 0.34
TRIM47-202ENST00000585333 EVA1CP58658 441 aa17.18■□□□□ 0.34
TRIM47-202ENST00000585333 U2AF1Q01081 240 aaKnown RBP eCLIP17.18■□□□□ 0.34
TRIM47-202ENST00000585333 ANKRD24Q8TF21 1146 aa17.18■□□□□ 0.34
TRIM47-202ENST00000585333 LMO7Q8WWI1 1683 aa17.17■□□□□ 0.34
TRIM47-202ENST00000585333 ADAMTS2O95450 1211 aa17.17■□□□□ 0.34
TRIM47-202ENST00000585333 NGEFQ8N5V2 710 aa17.17■□□□□ 0.34
TRIM47-202ENST00000585333 NWD2Q9ULI1 1742 aa17.16■□□□□ 0.34
TRIM47-202ENST00000585333 COL18A1P39060 1754 aa17.16■□□□□ 0.34
TRIM47-202ENST00000585333 CHRNA2Q15822 529 aa17.16■□□□□ 0.34
TRIM47-202ENST00000585333 FAM9BQ8IZU0 186 aa17.16■□□□□ 0.34
TRIM47-202ENST00000585333 WDR17Q8IZU2 1322 aa17.16■□□□□ 0.34
TRIM47-202ENST00000585333 FAM83GA6ND36 823 aa17.15■□□□□ 0.34
TRIM47-202ENST00000585333 COL5A2P05997 1499 aaPredicted RBP17.15■□□□□ 0.34
TRIM47-202ENST00000585333 IGSF1Q8N6C5 1336 aa17.15■□□□□ 0.34
TRIM47-202ENST00000585333 CCDC184Q52MB2 194 aa17.14■□□□□ 0.33
TRIM47-202ENST00000585333 NGLY1Q96IV0 654 aa17.14■□□□□ 0.33
TRIM47-202ENST00000585333 BTG4Q9NY30 223 aa17.14■□□□□ 0.33
TRIM47-202ENST00000585333 MAPK8IP3Q9UPT6 1336 aa17.14■□□□□ 0.33
TRIM47-202ENST00000585333 LTV1Q96GA3 475 aaPredicted RBP17.13■□□□□ 0.33
TRIM47-202ENST00000585333 AXIN2Q9Y2T1 843 aa17.13■□□□□ 0.33
TRIM47-202ENST00000585333 CAMTA1Q9Y6Y1 1673 aa17.13■□□□□ 0.33
TRIM47-202ENST00000585333 KDRP35968 1356 aa17.13■□□□□ 0.33
TRIM47-202ENST00000585333 SLIT2O94813 1529 aa17.12■□□□□ 0.33
TRIM47-202ENST00000585333 TOM1L2Q6ZVM7 507 aa17.12■□□□□ 0.33
TRIM47-202ENST00000585333 NLRP2Q9NX02 1062 aa17.12■□□□□ 0.33
TRIM47-202ENST00000585333 ADAMTS8Q9UP79 889 aa17.12■□□□□ 0.33
TRIM47-202ENST00000585333 CRB1P82279 1406 aa17.12■□□□□ 0.33
TRIM47-202ENST00000585333 PLCH1Q4KWH8 1693 aa17.11■□□□□ 0.33
TRIM47-202ENST00000585333 RGPD1P0DJD0 1748 aa17.11■□□□□ 0.33
TRIM47-202ENST00000585333 FNBP4Q8N3X1 1017 aaPredicted RBP17.11■□□□□ 0.33
TRIM47-202ENST00000585333 RUNDC1Q96C34 613 aa17.11■□□□□ 0.33
TRIM47-202ENST00000585333 C8orf37Q96NL8 207 aa17.11■□□□□ 0.33
TRIM47-202ENST00000585333 EYA1Q99502 592 aa17.11■□□□□ 0.33
TRIM47-202ENST00000585333 CARD10Q9BWT7 1032 aa17.11■□□□□ 0.33
TRIM47-202ENST00000585333 NCAPD2Q15021 1401 aa17.11■□□□□ 0.33
TRIM47-202ENST00000585333 NCBP3Q53F19 620 aaKnown RBP17.1■□□□□ 0.33
TRIM47-202ENST00000585333 SULT6B1Q6IMI4 303 aa17.1■□□□□ 0.33
TRIM47-202ENST00000585333 UNC5CLQ8IV45 518 aa17.1■□□□□ 0.33
TRIM47-202ENST00000585333 RAPGEF4Q8WZA2 1011 aa17.1■□□□□ 0.33
TRIM47-202ENST00000585333 CDCA7Q9BWT1 371 aaPredicted RBP17.1■□□□□ 0.33
TRIM47-202ENST00000585333 STRN4Q9NRL3 753 aa17.1■□□□□ 0.33
TRIM47-202ENST00000585333 THRAP3Q9Y2W1 955 aaKnown RBP17.1■□□□□ 0.33
TRIM47-202ENST00000585333 LRP6O75581 1613 aa17.1■□□□□ 0.33
TRIM47-202ENST00000585333 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.08■□□□□ 0.32
TRIM47-202ENST00000585333 RGPD5Q99666 1765 aa17.07■□□□□ 0.32
TRIM47-202ENST00000585333 AMOTQ4VCS5 1084 aa17.07■□□□□ 0.32
TRIM47-202ENST00000585333 NBPF6Q5VWK0 638 aa17.07■□□□□ 0.32
TRIM47-202ENST00000585333 NBPF4Q96M43 638 aa17.07■□□□□ 0.32
TRIM47-202ENST00000585333 RSPH6AQ9H0K4 717 aa17.07■□□□□ 0.32
TRIM47-202ENST00000585333 USP21Q9UK80 565 aa17.07■□□□□ 0.32
TRIM47-202ENST00000585333 TATP17735 454 aaPredicted RBP17.06■□□□□ 0.32
TRIM47-202ENST00000585333 PRKAR2BP31323 418 aa17.06■□□□□ 0.32
TRIM47-202ENST00000585333 LMOD3Q0VAK6 560 aa17.06■□□□□ 0.32
TRIM47-202ENST00000585333 VPS72Q15906 364 aa17.06■□□□□ 0.32
TRIM47-202ENST00000585333 GAS2L2Q8NHY3 880 aa17.06■□□□□ 0.32
TRIM47-202ENST00000585333 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.06■□□□□ 0.32
TRIM47-202ENST00000585333 NRAPQ86VF7 1730 aa17.05■□□□□ 0.32
TRIM47-202ENST00000585333 HMOX1P09601 288 aa17.05■□□□□ 0.32
TRIM47-202ENST00000585333 PLEKHO1Q53GL0 409 aaPredicted RBP17.05■□□□□ 0.32
TRIM47-202ENST00000585333 ZNF772Q68DY9 489 aaPredicted RBP17.05■□□□□ 0.32
TRIM47-202ENST00000585333 LARP1Q6PKG0 1096 aaKnown RBP17.04■□□□□ 0.32
TRIM47-202ENST00000585333 TCP11L2Q8N4U5 519 aa17.04■□□□□ 0.32
TRIM47-202ENST00000585333 PHF23Q9BUL5 403 aaPredicted RBP17.04■□□□□ 0.32
TRIM47-202ENST00000585333 TRPC5Q9UL62 973 aaPredicted RBP17.04■□□□□ 0.32
TRIM47-202ENST00000585333 SPG7Q9UQ90 795 aa17.04■□□□□ 0.32
TRIM47-202ENST00000585333 AFF2P51816 1311 aa17.03■□□□□ 0.32
TRIM47-202ENST00000585333 IL2RBP14784 551 aa17.03■□□□□ 0.32
TRIM47-202ENST00000585333 CCDC9Q9Y3X0 531 aaKnown RBP17.03■□□□□ 0.32
TRIM47-202ENST00000585333 SPATA31A5Q5VU36 1347 aa17.02■□□□□ 0.32
TRIM47-202ENST00000585333 SPATA31A7Q8IWB4 1347 aa17.02■□□□□ 0.32
TRIM47-202ENST00000585333 BCL9LQ86UU0 1499 aa17.02■□□□□ 0.32
TRIM47-202ENST00000585333 PLEKHF1Q96S99 279 aa17.02■□□□□ 0.32
TRIM47-202ENST00000585333 PARP4Q9UKK3 1724 aaKnown RBP17.01■□□□□ 0.31
TRIM47-202ENST00000585333 SPATA31A1Q5TZJ5 1347 aa17.01■□□□□ 0.31
TRIM47-202ENST00000585333 HNRNPUQ00839 825 aaKnown RBP eCLIP17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms