RNA–Protein interactions for RNA: ENST00000585315.5

CDH8-214, Transcript of cadherin 8, humanhuman

TSL 5

Gene CDH8, Length 9,076 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-214ENST00000585315 EXOSC9Q06265 439 aaKnown RBP8.65□□□□□ -1.02
CDH8-214ENST00000585315 ZSCAN25Q6NSZ9 544 aa8.65□□□□□ -1.02
CDH8-214ENST00000585315 FMNL2Q96PY5 1086 aa8.65□□□□□ -1.02
CDH8-214ENST00000585315 ANKRD30BQ9BXX2 1392 aa8.65□□□□□ -1.02
CDH8-214ENST00000585315 PRKAR2BP31323 418 aa8.65□□□□□ -1.02
CDH8-214ENST00000585315 ABCC11Q96J66 1382 aa8.65□□□□□ -1.02
CDH8-214ENST00000585315 SYCP1Q15431 976 aa8.65□□□□□ -1.02
CDH8-214ENST00000585315 CDK5RAP3Q96JB5 506 aa8.65□□□□□ -1.02
CDH8-214ENST00000585315 MAP3K11Q16584 847 aa8.65□□□□□ -1.03
CDH8-214ENST00000585315 KIF18AQ8NI77 898 aa8.65□□□□□ -1.03
CDH8-214ENST00000585315 UQCRHLA0A096LP55 91 aa8.65□□□□□ -1.03
CDH8-214ENST00000585315 UQCRHP07919 91 aa8.65□□□□□ -1.03
CDH8-214ENST00000585315 HMOX1P09601 288 aa8.65□□□□□ -1.03
CDH8-214ENST00000585315 SFPQP23246 707 aaKnown RBP eCLIP8.65□□□□□ -1.03
CDH8-214ENST00000585315 PDCL3Q9H2J4 239 aa8.65□□□□□ -1.03
CDH8-214ENST00000585315 ZSCAN12O43309 604 aa8.64□□□□□ -1.03
CDH8-214ENST00000585315 MAP9Q49MG5 647 aa8.64□□□□□ -1.03
CDH8-214ENST00000585315 GGNBP2Q9H3C7 697 aa8.64□□□□□ -1.03
CDH8-214ENST00000585315 PLEKHO1Q53GL0 409 aaPredicted RBP8.64□□□□□ -1.03
CDH8-214ENST00000585315 GNL3LQ9NVN8 582 aaKnown RBP8.64□□□□□ -1.03
CDH8-214ENST00000585315 WASF1Q92558 559 aa8.64□□□□□ -1.03
CDH8-214ENST00000585315 SPATA32Q96LK8 384 aa8.64□□□□□ -1.03
CDH8-214ENST00000585315 SLC52A1Q9NWF4 448 aa8.64□□□□□ -1.03
CDH8-214ENST00000585315 ATAD2Q6PL18 1390 aa8.64□□□□□ -1.03
CDH8-214ENST00000585315 UPF3BQ9BZI7 483 aaKnown RBP8.64□□□□□ -1.03
CDH8-214ENST00000585315 CCDC181Q5TID7 509 aa8.64□□□□□ -1.03
CDH8-214ENST00000585315 FCHSD2O94868 740 aa8.64□□□□□ -1.03
CDH8-214ENST00000585315 EZRP15311 586 aaKnown RBP8.64□□□□□ -1.03
CDH8-214ENST00000585315 IMMTQ16891 758 aaKnown RBP8.64□□□□□ -1.03
CDH8-214ENST00000585315 AEBP2Q6ZN18 517 aaPredicted RBP8.64□□□□□ -1.03
CDH8-214ENST00000585315 SH2B1Q9NRF2 756 aaPredicted RBP8.64□□□□□ -1.03
CDH8-214ENST00000585315 NOL7Q9UMY1 257 aaKnown RBP8.64□□□□□ -1.03
CDH8-214ENST00000585315 PRDM2Q13029 1718 aa8.64□□□□□ -1.03
CDH8-214ENST00000585315 CTAGE5O15320 804 aa8.63□□□□□ -1.03
CDH8-214ENST00000585315 CCDC158Q5M9N0 1113 aa8.63□□□□□ -1.03
CDH8-214ENST00000585315 RBM33Q96EV2 1170 aaKnown RBP8.63□□□□□ -1.03
CDH8-214ENST00000585315 CCDC27Q2M243 656 aa8.63□□□□□ -1.03
CDH8-214ENST00000585315 HDGFL1Q5TGJ6 251 aa8.63□□□□□ -1.03
CDH8-214ENST00000585315 GPRASP1Q5JY77 1395 aa8.63□□□□□ -1.03
CDH8-214ENST00000585315 TMCO3Q6UWJ1 677 aa8.63□□□□□ -1.03
CDH8-214ENST00000585315 ARHGAP29Q52LW3 1261 aa8.63□□□□□ -1.03
CDH8-214ENST00000585315 BMP2KQ9NSY1 1161 aaPredicted RBP8.63□□□□□ -1.03
CDH8-214ENST00000585315 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.63□□□□□ -1.03
CDH8-214ENST00000585315 CALCOCO1Q9P1Z2 691 aa8.63□□□□□ -1.03
CDH8-214ENST00000585315 RPGRIP1LQ68CZ1 1315 aa8.62□□□□□ -1.03
CDH8-214ENST00000585315 SYNJ2O15056 1496 aa8.62□□□□□ -1.03
CDH8-214ENST00000585315 NLRP6P59044 892 aa8.62□□□□□ -1.03
CDH8-214ENST00000585315 DAPK1P53355 1430 aa8.62□□□□□ -1.03
CDH8-214ENST00000585315 ZFYVE27Q5T4F4 411 aa8.62□□□□□ -1.03
CDH8-214ENST00000585315 NECTIN2Q92692 538 aa8.62□□□□□ -1.03
CDH8-214ENST00000585315 FBXW7Q969H0 707 aa8.62□□□□□ -1.03
CDH8-214ENST00000585315 CRACR2AQ9BSW2 395 aa8.62□□□□□ -1.03
CDH8-214ENST00000585315 FILIP1Q7Z7B0 1213 aa8.62□□□□□ -1.03
CDH8-214ENST00000585315 NOB1Q9ULX3 412 aaKnown RBP8.62□□□□□ -1.03
CDH8-214ENST00000585315 GOLGA6L9A6NEM1 432 aa8.62□□□□□ -1.03
CDH8-214ENST00000585315 SPC24Q8NBT2 197 aa8.62□□□□□ -1.03
CDH8-214ENST00000585315 HMGB2P26583 209 aaKnown RBP8.62□□□□□ -1.03
CDH8-214ENST00000585315 PTPN14Q15678 1187 aa8.62□□□□□ -1.03
CDH8-214ENST00000585315 SLC4A2P04920 1241 aa8.61□□□□□ -1.03
CDH8-214ENST00000585315 ALDH1L2Q3SY69 923 aa8.61□□□□□ -1.03
CDH8-214ENST00000585315 SUPT6HQ7KZ85 1726 aaKnown RBP8.61□□□□□ -1.03
CDH8-214ENST00000585315 EPB41L2O43491 1005 aaKnown RBP8.61□□□□□ -1.03
CDH8-214ENST00000585315 CCDC183Q5T5S1 534 aa8.61□□□□□ -1.03
CDH8-214ENST00000585315 CCDC83Q8IWF9 413 aa8.61□□□□□ -1.03
CDH8-214ENST00000585315 GLRX3O76003 335 aaKnown RBP8.61□□□□□ -1.03
CDH8-214ENST00000585315 GSDMDP57764 484 aa8.61□□□□□ -1.03
CDH8-214ENST00000585315 CEP131Q9UPN4 1083 aa8.61□□□□□ -1.03
CDH8-214ENST00000585315 ARAP1Q96P48 1450 aa8.61□□□□□ -1.03
CDH8-214ENST00000585315 ANO10Q9NW15 660 aa8.61□□□□□ -1.03
CDH8-214ENST00000585315 ERBINQ96RT1 1412 aa8.61□□□□□ -1.03
CDH8-214ENST00000585315 C9orf84Q5VXU9 1444 aa8.6□□□□□ -1.03
CDH8-214ENST00000585315 RAD21O60216 631 aa8.6□□□□□ -1.03
CDH8-214ENST00000585315 SEPT7Q16181 437 aaKnown RBP8.6□□□□□ -1.03
CDH8-214ENST00000585315 POTEB2H3BUK9 544 aa8.6□□□□□ -1.03
CDH8-214ENST00000585315 RAB11FIP3O75154 756 aa8.6□□□□□ -1.03
CDH8-214ENST00000585315 U3KPZ7 1027 aaPredicted RBP8.6□□□□□ -1.03
CDH8-214ENST00000585315 HMGB1P09429 215 aaKnown RBP8.6□□□□□ -1.03
CDH8-214ENST00000585315 NKTRP30414 1462 aaKnown RBP8.6□□□□□ -1.03
CDH8-214ENST00000585315 SLFN5Q08AF3 891 aa8.6□□□□□ -1.03
CDH8-214ENST00000585315 PRIMPOLQ96LW4 560 aa8.6□□□□□ -1.03
CDH8-214ENST00000585315 TIAM1Q13009 1591 aa8.6□□□□□ -1.03
CDH8-214ENST00000585315 CCDC196A0A1B0GTZ2 297 aa8.6□□□□□ -1.03
CDH8-214ENST00000585315 CCDC57Q2TAC2 916 aa8.6□□□□□ -1.03
CDH8-214ENST00000585315 TTLL5Q6EMB2 1281 aa8.6□□□□□ -1.03
CDH8-214ENST00000585315 CCDC148Q8NFR7 591 aa8.6□□□□□ -1.03
CDH8-214ENST00000585315 BCAR3O75815 825 aa8.6□□□□□ -1.03
CDH8-214ENST00000585315 TUBB4AP04350 444 aa8.59□□□□□ -1.03
CDH8-214ENST00000585315 NLRP2Q9NX02 1062 aa8.59□□□□□ -1.03
CDH8-214ENST00000585315 CFTRP13569 1480 aa8.59□□□□□ -1.03
CDH8-214ENST00000585315 PDRG1Q9NUG6 133 aa8.59□□□□□ -1.03
CDH8-214ENST00000585315 KRT18P05783 430 aaKnown RBP8.59□□□□□ -1.03
CDH8-214ENST00000585315 NEFHP12036 1026 aa8.59□□□□□ -1.03
CDH8-214ENST00000585315 CFAP70Q5T0N1 1121 aa8.59□□□□□ -1.03
CDH8-214ENST00000585315 ZNF397Q8NF99 534 aaPredicted RBP8.59□□□□□ -1.03
CDH8-214ENST00000585315 CGNQ9P2M7 1197 aaKnown RBP8.59□□□□□ -1.03
CDH8-214ENST00000585315 ZNF644Q9H582 1327 aaPredicted RBP8.59□□□□□ -1.03
CDH8-214ENST00000585315 DYNC1I1O14576 645 aa8.59□□□□□ -1.03
CDH8-214ENST00000585315 BRPF1P55201 1214 aaPredicted RBP8.59□□□□□ -1.03
CDH8-214ENST00000585315 AIMP1Q12904 312 aaKnown RBP8.59□□□□□ -1.03
CDH8-214ENST00000585315 KIF1BPQ96EK5 621 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 338.2 ms