RNA–Protein interactions for RNA: ENST00000585315.5

CDH8-214, Transcript of cadherin 8, humanhuman

TSL 5

Gene CDH8, Length 9,076 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-214ENST00000585315 DCAF8L2P0C7V8 631 aa12.06□□□□□ -0.48
CDH8-214ENST00000585315 PELP1Q8IZL8 1130 aaKnown RBP11.86□□□□□ -0.51
CDH8-214ENST00000585315 NISCHQ9Y2I1 1504 aa11.72□□□□□ -0.53
CDH8-214ENST00000585315 SUPT5HO00267 1087 aaKnown RBP11.69□□□□□ -0.54
CDH8-214ENST00000585315 APLP2Q06481 763 aa11.4□□□□□ -0.59
CDH8-214ENST00000585315 MYT1Q01538 1121 aa11.38□□□□□ -0.59
CDH8-214ENST00000585315 ZEB1P37275 1124 aaPredicted RBP11.35□□□□□ -0.59
CDH8-214ENST00000585315 CENPBP07199 599 aaPredicted RBP11.33□□□□□ -0.6
CDH8-214ENST00000585315 SHROOM4Q9ULL8 1493 aa11.29□□□□□ -0.6
CDH8-214ENST00000585315 CCER1Q8TC90 406 aaPredicted RBP11.28□□□□□ -0.6
CDH8-214ENST00000585315 FAM9AQ8IZU1 332 aaPredicted RBP11.19□□□□□ -0.62
CDH8-214ENST00000585315 PCGF6Q9BYE7 350 aa11.16□□□□□ -0.62
CDH8-214ENST00000585315 ERICH6Q7L0X2 663 aa11.12□□□□□ -0.63
CDH8-214ENST00000585315 EHMT2Q96KQ7 1210 aa11.06□□□□□ -0.64
CDH8-214ENST00000585315 NEFLP07196 543 aa11.01□□□□□ -0.65
CDH8-214ENST00000585315 TRIM41Q8WV44 630 aa10.95□□□□□ -0.66
CDH8-214ENST00000585315 TRIM26Q12899 539 aaPredicted RBP10.82□□□□□ -0.68
CDH8-214ENST00000585315 UBTFP17480 764 aaKnown RBP10.8□□□□□ -0.68
CDH8-214ENST00000585315 TTBK1Q5TCY1 1321 aaPredicted RBP10.78□□□□□ -0.68
CDH8-214ENST00000585315 HRCP23327 699 aa10.76□□□□□ -0.69
CDH8-214ENST00000585315 YTHDC1Q96MU7 727 aaKnown RBP10.75□□□□□ -0.69
CDH8-214ENST00000585315 DAXXQ9UER7 740 aaPredicted RBP10.68□□□□□ -0.7
CDH8-214ENST00000585315 ATP1B4Q9UN42 357 aaPredicted RBP10.64□□□□□ -0.71
CDH8-214ENST00000585315 RANGAP1P46060 587 aaPredicted RBP10.62□□□□□ -0.71
CDH8-214ENST00000585315 RTL5Q5HYW3 569 aaPredicted RBP10.52□□□□□ -0.73
CDH8-214ENST00000585315 CHIC1Q5VXU3 224 aa10.49□□□□□ -0.73
CDH8-214ENST00000585315 DIEXFQ68CQ4 756 aaKnown RBP10.46□□□□□ -0.74
CDH8-214ENST00000585315 ZNF316A6NFI3 1004 aaPredicted RBP10.39□□□□□ -0.75
CDH8-214ENST00000585315 PPARGC1BQ86YN6 1023 aaKnown RBP10.38□□□□□ -0.75
CDH8-214ENST00000585315 CLSPNQ9HAW4 1339 aa10.36□□□□□ -0.75
CDH8-214ENST00000585315 HNRNPUL2Q1KMD3 747 aaKnown RBP10.36□□□□□ -0.75
CDH8-214ENST00000585315 LOC105371045A0A1W2PR82 267 aa10.34□□□□□ -0.75
CDH8-214ENST00000585315 ITGAEP38570 1179 aa10.34□□□□□ -0.75
CDH8-214ENST00000585315 POLR3GLQ9BT43 218 aa10.3□□□□□ -0.76
CDH8-214ENST00000585315 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.29□□□□□ -0.76
CDH8-214ENST00000585315 CDK11AQ9UQ88 783 aaPredicted RBP10.27□□□□□ -0.77
CDH8-214ENST00000585315 ANP32CO43423 234 aa10.24□□□□□ -0.77
CDH8-214ENST00000585315 GTF3C3Q9Y5Q9 886 aa10.24□□□□□ -0.77
CDH8-214ENST00000585315 MYT1LQ9UL68 1186 aa10.23□□□□□ -0.77
CDH8-214ENST00000585315 ACIN1Q9UKV3 1341 aaKnown RBP10.17□□□□□ -0.78
CDH8-214ENST00000585315 ZBTB47Q9UFB7 747 aaPredicted RBP10.15□□□□□ -0.78
CDH8-214ENST00000585315 ANP32AP39687 249 aaKnown RBP10.15□□□□□ -0.79
CDH8-214ENST00000585315 FAM50AQ14320 339 aaKnown RBP10.14□□□□□ -0.79
CDH8-214ENST00000585315 TRIM52Q96A61 297 aa10.1□□□□□ -0.79
CDH8-214ENST00000585315 SLC4A1APQ9BWU0 796 aaKnown RBP10.1□□□□□ -0.79
CDH8-214ENST00000585315 CNGB1Q14028 1251 aaPredicted RBP10.09□□□□□ -0.79
CDH8-214ENST00000585315 NEUROD1Q13562 356 aa10.06□□□□□ -0.8
CDH8-214ENST00000585315 NEFMP07197 916 aa10.05□□□□□ -0.8
CDH8-214ENST00000585315 GLIPR1L2Q4G1C9 344 aa10.04□□□□□ -0.8
CDH8-214ENST00000585315 ANP32BQ92688 251 aaKnown RBP10.04□□□□□ -0.8
CDH8-214ENST00000585315 BCANQ96GW7 911 aa10.04□□□□□ -0.8
CDH8-214ENST00000585315 DCAF1Q9Y4B6 1507 aa10.03□□□□□ -0.8
CDH8-214ENST00000585315 CANXP27824 592 aaKnown RBP10.01□□□□□ -0.81
CDH8-214ENST00000585315 CSRNP3Q8WYN3 585 aa9.99□□□□□ -0.81
CDH8-214ENST00000585315 UPF2Q9HAU5 1272 aaKnown RBP9.99□□□□□ -0.81
CDH8-214ENST00000585315 ZNF326Q5BKZ1 582 aaKnown RBP9.95□□□□□ -0.82
CDH8-214ENST00000585315 TONSLQ96HA7 1378 aa9.94□□□□□ -0.82
CDH8-214ENST00000585315 HSP90AA1P07900 732 aaKnown RBP9.91□□□□□ -0.82
CDH8-214ENST00000585315 FKBP8Q14318 412 aa9.89□□□□□ -0.83
CDH8-214ENST00000585315 GOLGA6L2Q8N9W4 650 aaPredicted RBP9.89□□□□□ -0.83
CDH8-214ENST00000585315 EIF5BO60841 1220 aaKnown RBP9.89□□□□□ -0.83
CDH8-214ENST00000585315 ANP32EQ9BTT0 268 aa9.88□□□□□ -0.83
CDH8-214ENST00000585315 HNRNPUQ00839 825 aaKnown RBP eCLIP9.87□□□□□ -0.83
CDH8-214ENST00000585315 CCDC136Q96JN2 1154 aa9.85□□□□□ -0.83
CDH8-214ENST00000585315 NPM2Q86SE8 214 aaKnown RBP9.83□□□□□ -0.84
CDH8-214ENST00000585315 TMC1Q8TDI8 760 aa9.8□□□□□ -0.84
CDH8-214ENST00000585315 DDX10Q13206 875 aaKnown RBP9.78□□□□□ -0.84
CDH8-214ENST00000585315 ABCC9O60706 1549 aa9.77□□□□□ -0.85
CDH8-214ENST00000585315 EEA1Q15075 1411 aa9.77□□□□□ -0.85
CDH8-214ENST00000585315 DDRGK1Q96HY6 314 aa9.77□□□□□ -0.85
CDH8-214ENST00000585315 BECN1Q14457 450 aa9.75□□□□□ -0.85
CDH8-214ENST00000585315 FAM9BQ8IZU0 186 aa9.74□□□□□ -0.85
CDH8-214ENST00000585315 MRS2Q9HD23 443 aa9.74□□□□□ -0.85
CDH8-214ENST00000585315 SLC24A1O60721 1099 aa9.74□□□□□ -0.85
CDH8-214ENST00000585315 PABPN1Q86U42 306 aaKnown RBP eCLIP9.72□□□□□ -0.85
CDH8-214ENST00000585315 WDR43Q15061 677 aaKnown RBP eCLIP9.72□□□□□ -0.85
CDH8-214ENST00000585315 GOLGA6L22H0YM25 854 aa9.71□□□□□ -0.86
CDH8-214ENST00000585315 ERICH6BQ5W0A0 696 aa9.71□□□□□ -0.86
CDH8-214ENST00000585315 ZCCHC6Q5VYS8 1495 aaKnown RBP9.71□□□□□ -0.86
CDH8-214ENST00000585315 EIF4G2P78344 907 aaKnown RBP eCLIP9.71□□□□□ -0.86
CDH8-214ENST00000585315 FBLN2P98095 1184 aa9.71□□□□□ -0.86
CDH8-214ENST00000585315 SCAF1Q9H7N4 1312 aaKnown RBP9.7□□□□□ -0.86
CDH8-214ENST00000585315 MYH16Q9H6N6 1097 aa9.7□□□□□ -0.86
CDH8-214ENST00000585315 PPM1GO15355 546 aaPredicted RBP9.69□□□□□ -0.86
CDH8-214ENST00000585315 ZNF777Q9ULD5 760 aaPredicted RBP9.69□□□□□ -0.86
CDH8-214ENST00000585315 TRIM44Q96DX7 344 aaPredicted RBP9.69□□□□□ -0.86
CDH8-214ENST00000585315 P3H3Q8IVL6 736 aa9.68□□□□□ -0.86
CDH8-214ENST00000585315 TNNT2P45379 298 aaPredicted RBP9.68□□□□□ -0.86
CDH8-214ENST00000585315 NBR1Q14596 966 aa9.68□□□□□ -0.86
CDH8-214ENST00000585315 BCL11AQ9H165 835 aa9.68□□□□□ -0.86
CDH8-214ENST00000585315 CCDC180Q9P1Z9 1646 aa9.68□□□□□ -0.86
CDH8-214ENST00000585315 TSPY4P0CV99 314 aa9.68□□□□□ -0.86
CDH8-214ENST00000585315 TSPY10P0CW01 314 aa9.68□□□□□ -0.86
CDH8-214ENST00000585315 CLIP1P30622 1438 aa9.68□□□□□ -0.86
CDH8-214ENST00000585315 MTUS2Q5JR59 1369 aa9.67□□□□□ -0.86
CDH8-214ENST00000585315 MIER1Q8N108 512 aa9.67□□□□□ -0.86
CDH8-214ENST00000585315 ESF1Q9H501 851 aaKnown RBP9.66□□□□□ -0.86
CDH8-214ENST00000585315 CDCA8Q53HL2 280 aa9.65□□□□□ -0.87
CDH8-214ENST00000585315 NCLP19338 710 aaKnown RBP9.64□□□□□ -0.87
CDH8-214ENST00000585315 RSF1Q96T23 1441 aaPredicted RBP9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms