RNA–Protein interactions for RNA: ENST00000584541.1

RFFL-211, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-211ENST00000584541 COL14A1Q05707 1796 aaKnown RBP24.65■■□□□ 1.54
RFFL-211ENST00000584541 RGPD5Q99666 1765 aa24.63■■□□□ 1.53
RFFL-211ENST00000584541 COL18A1P39060 1754 aa24.62■■□□□ 1.53
RFFL-211ENST00000584541 ADAMTS2O95450 1211 aa24.62■■□□□ 1.53
RFFL-211ENST00000584541 HOXC9P31274 260 aa24.61■■□□□ 1.53
RFFL-211ENST00000584541 IP6K1Q92551 441 aa24.61■■□□□ 1.53
RFFL-211ENST00000584541 CCER2I3L3R5 266 aa24.6■■□□□ 1.53
RFFL-211ENST00000584541 BLMP54132 1417 aaPredicted RBP24.6■■□□□ 1.53
RFFL-211ENST00000584541 CHRNA2Q15822 529 aa24.59■■□□□ 1.53
RFFL-211ENST00000584541 PLCH1Q4KWH8 1693 aa24.59■■□□□ 1.53
RFFL-211ENST00000584541 LMO7Q8WWI1 1683 aa24.59■■□□□ 1.53
RFFL-211ENST00000584541 INSRP06213 1382 aa24.58■■□□□ 1.53
RFFL-211ENST00000584541 MEX3CQ5U5Q3 659 aaKnown RBP24.58■■□□□ 1.53
RFFL-211ENST00000584541 LRP6O75581 1613 aa24.57■■□□□ 1.52
RFFL-211ENST00000584541 FAM83GA6ND36 823 aa24.57■■□□□ 1.52
RFFL-211ENST00000584541 MRS2Q9HD23 443 aa24.57■■□□□ 1.52
RFFL-211ENST00000584541 HSP90AB2PQ58FF8 381 aa24.56■■□□□ 1.52
RFFL-211ENST00000584541 NWD2Q9ULI1 1742 aa24.55■■□□□ 1.52
RFFL-211ENST00000584541 COL3A1P02461 1466 aaPredicted RBP24.54■■□□□ 1.52
RFFL-211ENST00000584541 DIAPH1O60610 1272 aaKnown RBP24.54■■□□□ 1.52
RFFL-211ENST00000584541 FAM208AQ9UK61 1670 aaKnown RBP24.53■■□□□ 1.52
RFFL-211ENST00000584541 NUDCQ9Y266 331 aa24.53■■□□□ 1.52
RFFL-211ENST00000584541 CAMTA1Q9Y6Y1 1673 aa24.53■■□□□ 1.52
RFFL-211ENST00000584541 NGLY1Q96IV0 654 aa24.52■■□□□ 1.52
RFFL-211ENST00000584541 C8orf37Q96NL8 207 aa24.52■■□□□ 1.52
RFFL-211ENST00000584541 AXIN2Q9Y2T1 843 aa24.52■■□□□ 1.52
RFFL-211ENST00000584541 ANKRD24Q8TF21 1146 aa24.51■■□□□ 1.51
RFFL-211ENST00000584541 LTV1Q96GA3 475 aaPredicted RBP24.51■■□□□ 1.51
RFFL-211ENST00000584541 BTG4Q9NY30 223 aa24.51■■□□□ 1.51
RFFL-211ENST00000584541 EVA1CP58658 441 aa24.5■■□□□ 1.51
RFFL-211ENST00000584541 EIF4A2Q14240 407 aaKnown RBP24.5■■□□□ 1.51
RFFL-211ENST00000584541 CCDC184Q52MB2 194 aa24.5■■□□□ 1.51
RFFL-211ENST00000584541 CSB-PGBD3P0DP91 1061 aa24.49■■□□□ 1.51
RFFL-211ENST00000584541 COL5A2P05997 1499 aaPredicted RBP24.49■■□□□ 1.51
RFFL-211ENST00000584541 NRAPQ86VF7 1730 aa24.49■■□□□ 1.51
RFFL-211ENST00000584541 RGPD2P0DJD1 1756 aa24.48■■□□□ 1.51
RFFL-211ENST00000584541 ERBB3P21860 1342 aa24.48■■□□□ 1.51
RFFL-211ENST00000584541 WDR43Q15061 677 aaKnown RBP eCLIP24.48■■□□□ 1.51
RFFL-211ENST00000584541 SLIT2O94813 1529 aa24.47■■□□□ 1.51
RFFL-211ENST00000584541 IL13P35225 146 aa24.47■■□□□ 1.51
RFFL-211ENST00000584541 STRN4Q9NRL3 753 aa24.47■■□□□ 1.51
RFFL-211ENST00000584541 U2SURPO15042 1029 aaKnown RBP24.46■■□□□ 1.51
RFFL-211ENST00000584541 TNKS1BP1Q9C0C2 1729 aaKnown RBP24.46■■□□□ 1.51
RFFL-211ENST00000584541 RGPD1P0DJD0 1748 aa24.45■■□□□ 1.5
RFFL-211ENST00000584541 WDR17Q8IZU2 1322 aa24.44■■□□□ 1.5
RFFL-211ENST00000584541 FNBP4Q8N3X1 1017 aaPredicted RBP24.44■■□□□ 1.5
RFFL-211ENST00000584541 U2AF1L5P0DN76 240 aaPredicted RBP24.42■■□□□ 1.5
RFFL-211ENST00000584541 U2AF1Q01081 240 aaKnown RBP eCLIP24.42■■□□□ 1.5
RFFL-211ENST00000584541 TOM1L2Q6ZVM7 507 aa24.42■■□□□ 1.5
RFFL-211ENST00000584541 NLRP2Q9NX02 1062 aa24.42■■□□□ 1.5
RFFL-211ENST00000584541 UNC5CLQ8IV45 518 aa24.41■■□□□ 1.5
RFFL-211ENST00000584541 PNISRQ8TF01 805 aaKnown RBP24.41■■□□□ 1.5
RFFL-211ENST00000584541 USP21Q9UK80 565 aa24.41■■□□□ 1.5
RFFL-211ENST00000584541 AFF2P51816 1311 aa24.4■■□□□ 1.5
RFFL-211ENST00000584541 EYA1Q99502 592 aa24.4■■□□□ 1.5
RFFL-211ENST00000584541 CRB1P82279 1406 aa24.4■■□□□ 1.5
RFFL-211ENST00000584541 IGSF1Q8N6C5 1336 aa24.39■■□□□ 1.5
RFFL-211ENST00000584541 LARP1Q6PKG0 1096 aaKnown RBP24.39■■□□□ 1.49
RFFL-211ENST00000584541 BCL9LQ86UU0 1499 aa24.38■■□□□ 1.49
RFFL-211ENST00000584541 NBPF6Q5VWK0 638 aa24.38■■□□□ 1.49
RFFL-211ENST00000584541 FAM9BQ8IZU0 186 aa24.38■■□□□ 1.49
RFFL-211ENST00000584541 NBPF4Q96M43 638 aa24.38■■□□□ 1.49
RFFL-211ENST00000584541 CARD10Q9BWT7 1032 aa24.37■■□□□ 1.49
RFFL-211ENST00000584541 PNNQ9H307 717 aaKnown RBP24.37■■□□□ 1.49
RFFL-211ENST00000584541 SULT6B1Q6IMI4 303 aa24.36■■□□□ 1.49
RFFL-211ENST00000584541 CCDC9Q9Y3X0 531 aaKnown RBP24.36■■□□□ 1.49
RFFL-211ENST00000584541 HMOX1P09601 288 aa24.35■■□□□ 1.49
RFFL-211ENST00000584541 ADAMTS8Q9UP79 889 aa24.35■■□□□ 1.49
RFFL-211ENST00000584541 VPS72Q15906 364 aa24.34■■□□□ 1.49
RFFL-211ENST00000584541 USHBP1Q8N6Y0 703 aa24.34■■□□□ 1.49
RFFL-211ENST00000584541 NCAPD2Q15021 1401 aa24.34■■□□□ 1.49
RFFL-211ENST00000584541 FCHSD2O94868 740 aa24.33■■□□□ 1.49
RFFL-211ENST00000584541 NEFMP07197 916 aa24.33■■□□□ 1.49
RFFL-211ENST00000584541 KDRP35968 1356 aa24.32■■□□□ 1.48
RFFL-211ENST00000584541 ZNF772Q68DY9 489 aaPredicted RBP24.32■■□□□ 1.48
RFFL-211ENST00000584541 USP35Q9P2H5 1018 aa24.32■■□□□ 1.48
RFFL-211ENST00000584541 TRPC5Q9UL62 973 aaPredicted RBP24.32■■□□□ 1.48
RFFL-211ENST00000584541 WNK3Q9BYP7 1800 aa24.32■■□□□ 1.48
RFFL-211ENST00000584541 AEBP1Q8IUX7 1158 aa24.31■■□□□ 1.48
RFFL-211ENST00000584541 PARP4Q9UKK3 1724 aaKnown RBP24.31■■□□□ 1.48
RFFL-211ENST00000584541 SPATA31A5Q5VU36 1347 aa24.31■■□□□ 1.48
RFFL-211ENST00000584541 SPATA31A7Q8IWB4 1347 aa24.31■■□□□ 1.48
RFFL-211ENST00000584541 RAPGEF4Q8WZA2 1011 aa24.3■■□□□ 1.48
RFFL-211ENST00000584541 RSPH6AQ9H0K4 717 aa24.3■■□□□ 1.48
RFFL-211ENST00000584541 THRAP3Q9Y2W1 955 aaKnown RBP24.3■■□□□ 1.48
RFFL-211ENST00000584541 SPATA31A1Q5TZJ5 1347 aa24.3■■□□□ 1.48
RFFL-211ENST00000584541 TCP11L2Q8N4U5 519 aa24.29■■□□□ 1.48
RFFL-211ENST00000584541 PHF23Q9BUL5 403 aaPredicted RBP24.29■■□□□ 1.48
RFFL-211ENST00000584541 ATRNO75882 1429 aa24.28■■□□□ 1.48
RFFL-211ENST00000584541 PRKAR2BP31323 418 aa24.28■■□□□ 1.48
RFFL-211ENST00000584541 MAPK8IP3Q9UPT6 1336 aa24.28■■□□□ 1.48
RFFL-211ENST00000584541 TATP17735 454 aaPredicted RBP24.27■■□□□ 1.48
RFFL-211ENST00000584541 RUNDC1Q96C34 613 aa24.26■■□□□ 1.47
RFFL-211ENST00000584541 QTRT2Q9H974 415 aaKnown RBP24.26■■□□□ 1.47
RFFL-211ENST00000584541 IL2RBP14784 551 aa24.25■■□□□ 1.47
RFFL-211ENST00000584541 CCDC146Q8IYE0 955 aa24.25■■□□□ 1.47
RFFL-211ENST00000584541 GJD4Q96KN9 370 aaPredicted RBP24.24■■□□□ 1.47
RFFL-211ENST00000584541 CDCA7Q9BWT1 371 aaPredicted RBP24.24■■□□□ 1.47
RFFL-211ENST00000584541 PLEKHG2Q9H7P9 1386 aa24.24■■□□□ 1.47
RFFL-211ENST00000584541 BARGINQ6ZT62 677 aa24.23■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms