RNA–Protein interactions for RNA: ENST00000584472.5

CSNK1D-223, Transcript of casein kinase 1 delta, humanhuman

TSL 4

Gene CSNK1D, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-223ENST00000584472 AATKQ6ZMQ8 1374 aa21.99■■□□□ 1.11
CSNK1D-223ENST00000584472 FAM98CQ17RN3 349 aaKnown RBP21.98■■□□□ 1.11
CSNK1D-223ENST00000584472 CAMTA1Q9Y6Y1 1673 aa21.98■■□□□ 1.11
CSNK1D-223ENST00000584472 NSD3Q9BZ95 1437 aa21.97■■□□□ 1.11
CSNK1D-223ENST00000584472 BARGINQ6ZT62 677 aa21.97■■□□□ 1.11
CSNK1D-223ENST00000584472 CARD14Q9BXL6 1004 aa21.97■■□□□ 1.11
CSNK1D-223ENST00000584472 ARHGEF25Q86VW2 580 aa21.96■■□□□ 1.11
CSNK1D-223ENST00000584472 COL18A1P39060 1754 aa21.96■■□□□ 1.11
CSNK1D-223ENST00000584472 COG3Q96JB2 828 aa21.95■■□□□ 1.1
CSNK1D-223ENST00000584472 PANK3Q9H999 370 aa21.95■■□□□ 1.1
CSNK1D-223ENST00000584472 FYB1O15117 783 aa21.94■■□□□ 1.1
CSNK1D-223ENST00000584472 THRAP3Q9Y2W1 955 aaKnown RBP21.94■■□□□ 1.1
CSNK1D-223ENST00000584472 LTN1O94822 1766 aa21.93■■□□□ 1.1
CSNK1D-223ENST00000584472 COL5A2P05997 1499 aaPredicted RBP21.93■■□□□ 1.1
CSNK1D-223ENST00000584472 DDX10Q13206 875 aaKnown RBP21.93■■□□□ 1.1
CSNK1D-223ENST00000584472 SF3B2Q13435 895 aaKnown RBP21.93■■□□□ 1.1
CSNK1D-223ENST00000584472 CGNL1Q0VF96 1302 aa21.92■■□□□ 1.1
CSNK1D-223ENST00000584472 A0A0G2JS52 829 aa21.92■■□□□ 1.1
CSNK1D-223ENST00000584472 SOX12O15370 315 aa21.92■■□□□ 1.1
CSNK1D-223ENST00000584472 MYT1Q01538 1121 aa21.92■■□□□ 1.1
CSNK1D-223ENST00000584472 SRCAPQ6ZRS2 3230 aa21.91■■□□□ 1.1
CSNK1D-223ENST00000584472 EVA1CP58658 441 aa21.91■■□□□ 1.1
CSNK1D-223ENST00000584472 STRN4Q9NRL3 753 aa21.91■■□□□ 1.1
CSNK1D-223ENST00000584472 ZBTB7CA1YPR0 619 aa21.9■■□□□ 1.1
CSNK1D-223ENST00000584472 GGNBP2Q9H3C7 697 aa21.9■■□□□ 1.1
CSNK1D-223ENST00000584472 DISP2A7MBM2 1401 aa21.89■■□□□ 1.1
CSNK1D-223ENST00000584472 RGPD1P0DJD0 1748 aa21.89■■□□□ 1.1
CSNK1D-223ENST00000584472 TCP11L2Q8N4U5 519 aa21.89■■□□□ 1.09
CSNK1D-223ENST00000584472 CRB1P82279 1406 aa21.89■■□□□ 1.09
CSNK1D-223ENST00000584472 ANKRD26Q9UPS8 1709 aa21.88■■□□□ 1.09
CSNK1D-223ENST00000584472 PER1O15534 1290 aaPredicted RBP21.87■■□□□ 1.09
CSNK1D-223ENST00000584472 RGPD5Q99666 1765 aa21.87■■□□□ 1.09
CSNK1D-223ENST00000584472 LARP1Q6PKG0 1096 aaKnown RBP21.86■■□□□ 1.09
CSNK1D-223ENST00000584472 AXIN2Q9Y2T1 843 aa21.86■■□□□ 1.09
CSNK1D-223ENST00000584472 PARP4Q9UKK3 1724 aaKnown RBP21.86■■□□□ 1.09
CSNK1D-223ENST00000584472 BAG6P46379 1132 aa21.85■■□□□ 1.09
CSNK1D-223ENST00000584472 FAM196AQ6ZSG2 479 aa21.85■■□□□ 1.09
CSNK1D-223ENST00000584472 NSD2O96028 1365 aa21.85■■□□□ 1.09
CSNK1D-223ENST00000584472 WDR17Q8IZU2 1322 aa21.84■■□□□ 1.09
CSNK1D-223ENST00000584472 RTL1A6NKG5 1358 aa21.83■■□□□ 1.08
CSNK1D-223ENST00000584472 MAP3K19Q56UN5 1328 aa21.82■■□□□ 1.08
CSNK1D-223ENST00000584472 KNSTRNQ9Y448 316 aa21.82■■□□□ 1.08
CSNK1D-223ENST00000584472 TNS1Q9HBL0 1735 aaKnown RBP21.81■■□□□ 1.08
CSNK1D-223ENST00000584472 DEFB132Q7Z7B7 95 aa21.81■■□□□ 1.08
CSNK1D-223ENST00000584472 IP6K1Q92551 441 aa21.81■■□□□ 1.08
CSNK1D-223ENST00000584472 KIF24Q5T7B8 1368 aa21.81■■□□□ 1.08
CSNK1D-223ENST00000584472 PARD3Q8TEW0 1356 aa21.8■■□□□ 1.08
CSNK1D-223ENST00000584472 CDCA7Q9BWT1 371 aaPredicted RBP21.8■■□□□ 1.08
CSNK1D-223ENST00000584472 USP35Q9P2H5 1018 aa21.8■■□□□ 1.08
CSNK1D-223ENST00000584472 ERBB3P21860 1342 aa21.8■■□□□ 1.08
CSNK1D-223ENST00000584472 FAM208AQ9UK61 1670 aaKnown RBP21.79■■□□□ 1.08
CSNK1D-223ENST00000584472 PDE3BQ13370 1112 aa21.79■■□□□ 1.08
CSNK1D-223ENST00000584472 AMER1Q5JTC6 1135 aaPredicted RBP21.78■■□□□ 1.08
CSNK1D-223ENST00000584472 TOM1L2Q6ZVM7 507 aa21.78■■□□□ 1.08
CSNK1D-223ENST00000584472 CSB-PGBD3P0DP91 1061 aa21.77■■□□□ 1.08
CSNK1D-223ENST00000584472 HOXC9P31274 260 aa21.77■■□□□ 1.08
CSNK1D-223ENST00000584472 AMPHP49418 695 aa21.77■■□□□ 1.08
CSNK1D-223ENST00000584472 CARD10Q9BWT7 1032 aa21.77■■□□□ 1.08
CSNK1D-223ENST00000584472 NPC1L1Q9UHC9 1359 aa21.76■■□□□ 1.07
CSNK1D-223ENST00000584472 WNK3Q9BYP7 1800 aa21.76■■□□□ 1.07
CSNK1D-223ENST00000584472 BCL9O00512 1426 aa21.76■■□□□ 1.07
CSNK1D-223ENST00000584472 FBLN1P23142 703 aa21.76■■□□□ 1.07
CSNK1D-223ENST00000584472 RRS1Q15050 365 aaKnown RBP21.76■■□□□ 1.07
CSNK1D-223ENST00000584472 FLT4P35916 1363 aa21.75■■□□□ 1.07
CSNK1D-223ENST00000584472 PEAK1Q9H792 1746 aa21.75■■□□□ 1.07
CSNK1D-223ENST00000584472 ANKRD24Q8TF21 1146 aa21.75■■□□□ 1.07
CSNK1D-223ENST00000584472 LRRC37A3O60309 1634 aa21.74■■□□□ 1.07
CSNK1D-223ENST00000584472 FAM182BQ5T319 152 aa21.74■■□□□ 1.07
CSNK1D-223ENST00000584472 OVOS2A0A0G2JMS6 1433 aa21.73■■□□□ 1.07
CSNK1D-223ENST00000584472 MAP2P11137 1827 aaKnown RBP21.73■■□□□ 1.07
CSNK1D-223ENST00000584472 INSRP06213 1382 aa21.73■■□□□ 1.07
CSNK1D-223ENST00000584472 CC2D1BQ5T0F9 858 aaKnown RBP21.71■■□□□ 1.07
CSNK1D-223ENST00000584472 SMG6Q86US8 1419 aaKnown RBP21.71■■□□□ 1.07
CSNK1D-223ENST00000584472 TRIM37O94972 964 aa21.7■■□□□ 1.06
CSNK1D-223ENST00000584472 EN1Q05925 392 aaPredicted RBP21.7■■□□□ 1.06
CSNK1D-223ENST00000584472 DDB1Q16531 1140 aa21.7■■□□□ 1.06
CSNK1D-223ENST00000584472 MORC1Q86VD1 984 aa21.7■■□□□ 1.06
CSNK1D-223ENST00000584472 NLRP2Q9NX02 1062 aa21.7■■□□□ 1.06
CSNK1D-223ENST00000584472 CAMKK2Q96RR4 588 aa21.69■■□□□ 1.06
CSNK1D-223ENST00000584472 POLKQ9UBT6 870 aa21.69■■□□□ 1.06
CSNK1D-223ENST00000584472 EMILIN1Q9Y6C2 1016 aa21.69■■□□□ 1.06
CSNK1D-223ENST00000584472 RGPD3A6NKT7 1758 aaPredicted RBP21.69■■□□□ 1.06
CSNK1D-223ENST00000584472 RGPD4Q7Z3J3 1758 aa21.69■■□□□ 1.06
CSNK1D-223ENST00000584472 CNGB1Q14028 1251 aaPredicted RBP21.68■■□□□ 1.06
CSNK1D-223ENST00000584472 LRP5O75197 1615 aa21.68■■□□□ 1.06
CSNK1D-223ENST00000584472 TNNT2P45379 298 aaPredicted RBP21.67■■□□□ 1.06
CSNK1D-223ENST00000584472 HSP90AB2PQ58FF8 381 aa21.67■■□□□ 1.06
CSNK1D-223ENST00000584472 DIEXFQ68CQ4 756 aaKnown RBP21.67■■□□□ 1.06
CSNK1D-223ENST00000584472 LTV1Q96GA3 475 aaPredicted RBP21.67■■□□□ 1.06
CSNK1D-223ENST00000584472 RREB1Q92766 1687 aa21.66■■□□□ 1.06
CSNK1D-223ENST00000584472 APBA3O96018 575 aa21.65■■□□□ 1.06
CSNK1D-223ENST00000584472 TNS2Q63HR2 1409 aa21.64■■□□□ 1.06
CSNK1D-223ENST00000584472 RGPD2P0DJD1 1756 aa21.64■■□□□ 1.06
CSNK1D-223ENST00000584472 PPM1GO15355 546 aaPredicted RBP21.64■■□□□ 1.05
CSNK1D-223ENST00000584472 SBF2Q86WG5 1849 aa21.63■■□□□ 1.05
CSNK1D-223ENST00000584472 EZH2Q15910 746 aaKnown RBP21.62■■□□□ 1.05
CSNK1D-223ENST00000584472 PRKRIP1Q9H875 184 aaPredicted RBP21.62■■□□□ 1.05
CSNK1D-223ENST00000584472 PLSCR1O15162 318 aa21.61■■□□□ 1.05
CSNK1D-223ENST00000584472 IL2RBP14784 551 aa21.61■■□□□ 1.05
CSNK1D-223ENST00000584472 BCL11BQ9C0K0 894 aaPredicted RBP21.61■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms