RNA–Protein interactions for RNA: ENST00000584310.1

SCN4A-203, Transcript of sodium voltage-gated channel alpha subunit 4, humanhuman

TSL 4

Gene SCN4A, Length 577 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4A-203ENST00000584310 CDCA7Q9BWT1 371 aaPredicted RBP20.61■□□□□ 0.89
SCN4A-203ENST00000584310 COL5A2P05997 1499 aaPredicted RBP20.61■□□□□ 0.89
SCN4A-203ENST00000584310 MON2Q7Z3U7 1717 aa20.61■□□□□ 0.89
SCN4A-203ENST00000584310 CAMTA1Q9Y6Y1 1673 aa20.61■□□□□ 0.89
SCN4A-203ENST00000584310 CD163L1Q9NR16 1453 aa20.6■□□□□ 0.89
SCN4A-203ENST00000584310 WDR17Q8IZU2 1322 aa20.59■□□□□ 0.89
SCN4A-203ENST00000584310 FAM196AQ6ZSG2 479 aa20.59■□□□□ 0.89
SCN4A-203ENST00000584310 BAG6P46379 1132 aa20.58■□□□□ 0.89
SCN4A-203ENST00000584310 ZRANB1Q9UGI0 708 aa20.56■□□□□ 0.88
SCN4A-203ENST00000584310 LMO7Q8WWI1 1683 aa20.55■□□□□ 0.88
SCN4A-203ENST00000584310 ABCC6O95255 1503 aa20.55■□□□□ 0.88
SCN4A-203ENST00000584310 AMPHP49418 695 aa20.55■□□□□ 0.88
SCN4A-203ENST00000584310 DDB1Q16531 1140 aa20.54■□□□□ 0.88
SCN4A-203ENST00000584310 CARD10Q9BWT7 1032 aa20.54■□□□□ 0.88
SCN4A-203ENST00000584310 CCDC7Q96M83 1385 aa20.54■□□□□ 0.88
SCN4A-203ENST00000584310 HSPA5P11021 654 aaKnown RBP20.53■□□□□ 0.88
SCN4A-203ENST00000584310 NLRP2Q9NX02 1062 aa20.53■□□□□ 0.88
SCN4A-203ENST00000584310 AXIN2Q9Y2T1 843 aa20.53■□□□□ 0.88
SCN4A-203ENST00000584310 NFAT5O94916 1531 aa20.52■□□□□ 0.87
SCN4A-203ENST00000584310 OVOS2A0A0J9YW53 1432 aa20.52■□□□□ 0.87
SCN4A-203ENST00000584310 OVOS2Q6IE36 1432 aa20.52■□□□□ 0.87
SCN4A-203ENST00000584310 THSD7AQ9UPZ6 1657 aa20.5■□□□□ 0.87
SCN4A-203ENST00000584310 CGNL1Q0VF96 1302 aa20.5■□□□□ 0.87
SCN4A-203ENST00000584310 BRWD3Q6RI45 1802 aa20.49■□□□□ 0.87
SCN4A-203ENST00000584310 EXOC5O00471 708 aa20.49■□□□□ 0.87
SCN4A-203ENST00000584310 ANKRD24Q8TF21 1146 aa20.49■□□□□ 0.87
SCN4A-203ENST00000584310 IP6K1Q92551 441 aa20.49■□□□□ 0.87
SCN4A-203ENST00000584310 GGNBP2Q9H3C7 697 aa20.49■□□□□ 0.87
SCN4A-203ENST00000584310 ERBB3P21860 1342 aa20.49■□□□□ 0.87
SCN4A-203ENST00000584310 FYB1O15117 783 aa20.48■□□□□ 0.87
SCN4A-203ENST00000584310 FAM182BQ5T319 152 aa20.48■□□□□ 0.87
SCN4A-203ENST00000584310 USP54Q70EL1 1684 aa20.48■□□□□ 0.87
SCN4A-203ENST00000584310 SMG6Q86US8 1419 aaKnown RBP20.46■□□□□ 0.87
SCN4A-203ENST00000584310 NSD3Q9BZ95 1437 aa20.45■□□□□ 0.86
SCN4A-203ENST00000584310 TRIM37O94972 964 aa20.45■□□□□ 0.86
SCN4A-203ENST00000584310 DEFB132Q7Z7B7 95 aa20.45■□□□□ 0.86
SCN4A-203ENST00000584310 LTV1Q96GA3 475 aaPredicted RBP20.45■□□□□ 0.86
SCN4A-203ENST00000584310 RTL1A6NKG5 1358 aa20.45■□□□□ 0.86
SCN4A-203ENST00000584310 OVOS2A0A0G2JMS6 1433 aa20.44■□□□□ 0.86
SCN4A-203ENST00000584310 IL2RBP14784 551 aa20.44■□□□□ 0.86
SCN4A-203ENST00000584310 MAP3K19Q56UN5 1328 aa20.44■□□□□ 0.86
SCN4A-203ENST00000584310 APBA3O96018 575 aa20.43■□□□□ 0.86
SCN4A-203ENST00000584310 COL18A1P39060 1754 aa20.42■□□□□ 0.86
SCN4A-203ENST00000584310 HOXC9P31274 260 aa20.42■□□□□ 0.86
SCN4A-203ENST00000584310 RRS1Q15050 365 aaKnown RBP20.4■□□□□ 0.86
SCN4A-203ENST00000584310 KIF24Q5T7B8 1368 aa20.4■□□□□ 0.86
SCN4A-203ENST00000584310 PARD3Q8TEW0 1356 aa20.4■□□□□ 0.86
SCN4A-203ENST00000584310 RGPD1P0DJD0 1748 aa20.39■□□□□ 0.86
SCN4A-203ENST00000584310 PARP4Q9UKK3 1724 aaKnown RBP20.39■□□□□ 0.86
SCN4A-203ENST00000584310 EN1Q05925 392 aaPredicted RBP20.39■□□□□ 0.85
SCN4A-203ENST00000584310 CARD14Q9BXL6 1004 aa20.39■□□□□ 0.85
SCN4A-203ENST00000584310 KNSTRNQ9Y448 316 aa20.39■□□□□ 0.85
SCN4A-203ENST00000584310 LTN1O94822 1766 aa20.39■□□□□ 0.85
SCN4A-203ENST00000584310 FLT4P35916 1363 aa20.38■□□□□ 0.85
SCN4A-203ENST00000584310 PPM1GO15355 546 aaPredicted RBP20.38■□□□□ 0.85
SCN4A-203ENST00000584310 PANK3Q9H999 370 aa20.38■□□□□ 0.85
SCN4A-203ENST00000584310 DISP2A7MBM2 1401 aa20.36■□□□□ 0.85
SCN4A-203ENST00000584310 EP400Q96L91 3159 aa20.36■□□□□ 0.85
SCN4A-203ENST00000584310 NBPF14Q5TI25 921 aa20.36■□□□□ 0.85
SCN4A-203ENST00000584310 RAPGEF4Q8WZA2 1011 aa20.35■□□□□ 0.85
SCN4A-203ENST00000584310 TNS2Q63HR2 1409 aa20.35■□□□□ 0.85
SCN4A-203ENST00000584310 NSD2O96028 1365 aa20.34■□□□□ 0.85
SCN4A-203ENST00000584310 BCL11BQ9C0K0 894 aaPredicted RBP20.34■□□□□ 0.85
SCN4A-203ENST00000584310 KIF20BQ96Q89 1820 aa20.34■□□□□ 0.85
SCN4A-203ENST00000584310 RGPD5Q99666 1765 aa20.34■□□□□ 0.85
SCN4A-203ENST00000584310 MYOM1P52179 1685 aa20.33■□□□□ 0.85
SCN4A-203ENST00000584310 FBLN1P23142 703 aa20.33■□□□□ 0.85
SCN4A-203ENST00000584310 MARCH10Q8NA82 808 aaPredicted RBP20.33■□□□□ 0.85
SCN4A-203ENST00000584310 INSRP06213 1382 aa20.33■□□□□ 0.84
SCN4A-203ENST00000584310 LRRC37A3O60309 1634 aa20.32■□□□□ 0.84
SCN4A-203ENST00000584310 FAM208AQ9UK61 1670 aaKnown RBP20.32■□□□□ 0.84
SCN4A-203ENST00000584310 BCL9O00512 1426 aa20.31■□□□□ 0.84
SCN4A-203ENST00000584310 EZH2Q15910 746 aaKnown RBP20.31■□□□□ 0.84
SCN4A-203ENST00000584310 MORC1Q86VD1 984 aa20.31■□□□□ 0.84
SCN4A-203ENST00000584310 TATP17735 454 aaPredicted RBP20.3■□□□□ 0.84
SCN4A-203ENST00000584310 TNNT2P45379 298 aaPredicted RBP20.3■□□□□ 0.84
SCN4A-203ENST00000584310 HSP90AB2PQ58FF8 381 aa20.3■□□□□ 0.84
SCN4A-203ENST00000584310 DDX54Q8TDD1 881 aaKnown RBP20.3■□□□□ 0.84
SCN4A-203ENST00000584310 CAMKK2Q96RR4 588 aa20.29■□□□□ 0.84
SCN4A-203ENST00000584310 PLSCR1O15162 318 aa20.28■□□□□ 0.84
SCN4A-203ENST00000584310 ZCRB1Q8TBF4 217 aaKnown RBP20.28■□□□□ 0.84
SCN4A-203ENST00000584310 EMILIN1Q9Y6C2 1016 aa20.28■□□□□ 0.84
SCN4A-203ENST00000584310 KIF7Q2M1P5 1343 aa20.27■□□□□ 0.84
SCN4A-203ENST00000584310 WNK3Q9BYP7 1800 aa20.27■□□□□ 0.84
SCN4A-203ENST00000584310 WASHC2AQ641Q2 1341 aa20.26■□□□□ 0.83
SCN4A-203ENST00000584310 NBPF6Q5VWK0 638 aa20.25■□□□□ 0.83
SCN4A-203ENST00000584310 NBPF4Q96M43 638 aa20.25■□□□□ 0.83
SCN4A-203ENST00000584310 TNS1Q9HBL0 1735 aaKnown RBP20.24■□□□□ 0.83
SCN4A-203ENST00000584310 PSDA5PKW4 1024 aaPredicted RBP20.23■□□□□ 0.83
SCN4A-203ENST00000584310 HMGB2P26583 209 aaKnown RBP20.23■□□□□ 0.83
SCN4A-203ENST00000584310 SYTL4Q96C24 671 aaPredicted RBP20.23■□□□□ 0.83
SCN4A-203ENST00000584310 ACSBG1Q96GR2 724 aa20.23■□□□□ 0.83
SCN4A-203ENST00000584310 POLKQ9UBT6 870 aa20.23■□□□□ 0.83
SCN4A-203ENST00000584310 R3HDM1Q15032 1099 aaKnown RBP20.22■□□□□ 0.83
SCN4A-203ENST00000584310 USHBP1Q8N6Y0 703 aa20.22■□□□□ 0.83
SCN4A-203ENST00000584310 PCDH11XQ9BZA7 1347 aa20.22■□□□□ 0.83
SCN4A-203ENST00000584310 PCDH11YQ9BZA8 1340 aa20.22■□□□□ 0.83
SCN4A-203ENST00000584310 SPG7Q9UQ90 795 aa20.21■□□□□ 0.83
SCN4A-203ENST00000584310 PEAK1Q9H792 1746 aa20.19■□□□□ 0.82
SCN4A-203ENST00000584310 STK32BQ9NY57 414 aa20.17■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms