RNA–Protein interactions for RNA: ENST00000583877.5

NUP85-223, Transcript of nucleoporin 85, human

TSL 3

Gene NUP85, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NUP85-223	ENST00000583877	OVOS2	A0A0G2JMS6	1433 aa		12.74	□□□□□ -0.37
NUP85-223	ENST00000583877	OVOS2	A0A0J9YW53	1432 aa		12.74	□□□□□ -0.37
NUP85-223	ENST00000583877	CRB1	P82279	1406 aa		12.74	□□□□□ -0.37
NUP85-223	ENST00000583877	OVOS2	Q6IE36	1432 aa		12.74	□□□□□ -0.37
NUP85-223	ENST00000583877	BRD4	O60885	1362 aa	Predicted RBP	12.74	□□□□□ -0.37
NUP85-223	ENST00000583877	YY1	P25490	414 aa		12.74	□□□□□ -0.37
NUP85-223	ENST00000583877	NLRP13	Q86W25	1043 aa		12.74	□□□□□ -0.37
NUP85-223	ENST00000583877	SPON1	Q9HCB6	807 aa		12.74	□□□□□ -0.37
NUP85-223	ENST00000583877	PPIP5K1	Q6PFW1	1433 aa		12.73	□□□□□ -0.37
NUP85-223	ENST00000583877	NINL	Q9Y2I6	1382 aa		12.73	□□□□□ -0.37
NUP85-223	ENST00000583877	KCNQ2	O43526	872 aa		12.73	□□□□□ -0.37
NUP85-223	ENST00000583877	GC	P02774	474 aa		12.73	□□□□□ -0.37
NUP85-223	ENST00000583877	PIK3C2A	O00443	1686 aa		12.73	□□□□□ -0.37
NUP85-223	ENST00000583877	SLIT3	O75094	1523 aa		12.72	□□□□□ -0.37
NUP85-223	ENST00000583877	PPP1R1B	Q9UD71	204 aa	Predicted RBP	12.72	□□□□□ -0.37
NUP85-223	ENST00000583877	PLSCR1	O15162	318 aa		12.71	□□□□□ -0.37
NUP85-223	ENST00000583877	AATK	Q6ZMQ8	1374 aa		12.7	□□□□□ -0.38
NUP85-223	ENST00000583877	SRPK2	P78362	688 aa	Known RBP	12.7	□□□□□ -0.38
NUP85-223	ENST00000583877	MYOM1	P52179	1685 aa		12.7	□□□□□ -0.38
NUP85-223	ENST00000583877	USP6	P35125	1406 aa		12.69	□□□□□ -0.38
NUP85-223	ENST00000583877	CENPJ	Q9HC77	1338 aa	Predicted RBP	12.68	□□□□□ -0.38
NUP85-223	ENST00000583877	DDB1	Q16531	1140 aa		12.68	□□□□□ -0.38
NUP85-223	ENST00000583877	NBPF1	Q3BBV0	1214 aa		12.68	□□□□□ -0.38
NUP85-223	ENST00000583877	ZNF219	Q9P2Y4	722 aa	Predicted RBP	12.68	□□□□□ -0.38
NUP85-223	ENST00000583877	TRPM1	Q7Z4N2	1603 aa		12.67	□□□□□ -0.38
NUP85-223	ENST00000583877	NLRP6	P59044	892 aa		12.67	□□□□□ -0.38
NUP85-223	ENST00000583877	BCL11B	Q9C0K0	894 aa	Predicted RBP	12.67	□□□□□ -0.38
NUP85-223	ENST00000583877	CABP2	Q9NPB3	220 aa		12.67	□□□□□ -0.38
NUP85-223	ENST00000583877	BCL9	O00512	1426 aa		12.67	□□□□□ -0.38
NUP85-223	ENST00000583877	GOLGB1	Q14789	3259 aa	Known RBP	12.67	□□□□□ -0.38
NUP85-223	ENST00000583877	ZBTB7C	A1YPR0	619 aa		12.66	□□□□□ -0.38
NUP85-223	ENST00000583877	TOM1L2	Q6ZVM7	507 aa		12.66	□□□□□ -0.38
NUP85-223	ENST00000583877	LTN1	O94822	1766 aa		12.66	□□□□□ -0.38
NUP85-223	ENST00000583877	WDR17	Q8IZU2	1322 aa		12.65	□□□□□ -0.38
NUP85-223	ENST00000583877	NHS	Q6T4R5	1651 aa		12.65	□□□□□ -0.38
NUP85-223	ENST00000583877	CDCA7	Q9BWT1	371 aa	Predicted RBP	12.65	□□□□□ -0.38
NUP85-223	ENST00000583877	ANO8	Q9HCE9	1232 aa	Predicted RBP	12.65	□□□□□ -0.38
NUP85-223	ENST00000583877	CABP1	Q9NZU7	370 aa		12.65	□□□□□ -0.38
NUP85-223	ENST00000583877	CPSF1	Q10570	1443 aa	Known RBP	12.64	□□□□□ -0.39
NUP85-223	ENST00000583877	MON2	Q7Z3U7	1717 aa		12.64	□□□□□ -0.39
NUP85-223	ENST00000583877	ABCC6	O95255	1503 aa		12.63	□□□□□ -0.39
NUP85-223	ENST00000583877	BTAF1	O14981	1849 aa		12.63	□□□□□ -0.39
NUP85-223	ENST00000583877	AMER1	Q5JTC6	1135 aa	Predicted RBP	12.63	□□□□□ -0.39
NUP85-223	ENST00000583877	PTF1A	Q7RTS3	328 aa		12.63	□□□□□ -0.39
NUP85-223	ENST00000583877	PROM2	Q8N271	834 aa		12.63	□□□□□ -0.39
NUP85-223	ENST00000583877	MARCH10	Q8NA82	808 aa	Predicted RBP	12.63	□□□□□ -0.39
NUP85-223	ENST00000583877	AXIN2	Q9Y2T1	843 aa		12.63	□□□□□ -0.39
NUP85-223	ENST00000583877	USP54	Q70EL1	1684 aa		12.63	□□□□□ -0.39
NUP85-223	ENST00000583877	PDGFD	Q9GZP0	370 aa	Predicted RBP	12.62	□□□□□ -0.39
NUP85-223	ENST00000583877	RTN4	Q9NQC3	1192 aa	Known RBP	12.62	□□□□□ -0.39
NUP85-223	ENST00000583877	QSER1	Q2KHR3	1735 aa		12.62	□□□□□ -0.39
NUP85-223	ENST00000583877	NFAT5	O94916	1531 aa		12.62	□□□□□ -0.39
NUP85-223	ENST00000583877	ARHGEF25	Q86VW2	580 aa		12.61	□□□□□ -0.39
NUP85-223	ENST00000583877	KCNH5	Q8NCM2	988 aa		12.61	□□□□□ -0.39
NUP85-223	ENST00000583877	CARD10	Q9BWT7	1032 aa		12.61	□□□□□ -0.39
NUP85-223	ENST00000583877	EVC2	Q86UK5	1308 aa		12.61	□□□□□ -0.39
NUP85-223	ENST00000583877	PAPPA	Q13219	1627 aa		12.6	□□□□□ -0.39
NUP85-223	ENST00000583877	ZBTB7A	O95365	584 aa		12.6	□□□□□ -0.39
NUP85-223	ENST00000583877	PTGER2	P43116	358 aa		12.6	□□□□□ -0.39
NUP85-223	ENST00000583877	ZNF692	Q9BU19	519 aa	Predicted RBP	12.6	□□□□□ -0.39
NUP85-223	ENST00000583877	STK32B	Q9NY57	414 aa		12.6	□□□□□ -0.39
NUP85-223	ENST00000583877	SLC15A2	Q16348	729 aa		12.59	□□□□□ -0.39
NUP85-223	ENST00000583877	TXNRD1	Q16881	649 aa		12.59	□□□□□ -0.39
NUP85-223	ENST00000583877	TNS2	Q63HR2	1409 aa		12.59	□□□□□ -0.39
NUP85-223	ENST00000583877	COL24A1	Q17RW2	1714 aa		12.59	□□□□□ -0.39
NUP85-223	ENST00000583877	TTC21B	Q7Z4L5	1316 aa		12.59	□□□□□ -0.39
NUP85-223	ENST00000583877	TTC21A	Q8NDW8	1320 aa		12.59	□□□□□ -0.39
NUP85-223	ENST00000583877	CCDC7	Q96M83	1385 aa		12.58	□□□□□ -0.4
NUP85-223	ENST00000583877	EXOC5	O00471	708 aa		12.58	□□□□□ -0.4
NUP85-223	ENST00000583877	CSB-PGBD3	P0DP91	1061 aa		12.58	□□□□□ -0.4
NUP85-223	ENST00000583877	TUBGCP6	Q96RT7	1819 aa		12.58	□□□□□ -0.4
NUP85-223	ENST00000583877	MTFR1L	Q9H019	292 aa		12.57	□□□□□ -0.4
NUP85-223	ENST00000583877	ZNF784	Q8NCA9	323 aa	Predicted RBP	12.56	□□□□□ -0.4
NUP85-223	ENST00000583877	SYT17	Q9BSW7	474 aa		12.56	□□□□□ -0.4
NUP85-223	ENST00000583877	FHDC1	Q9C0D6	1143 aa	Predicted RBP	12.56	□□□□□ -0.4
NUP85-223	ENST00000583877	FAM208A	Q9UK61	1670 aa	Known RBP	12.56	□□□□□ -0.4
NUP85-223	ENST00000583877	CEP350	Q5VT06	3117 aa		12.55	□□□□□ -0.4
NUP85-223	ENST00000583877	SOX12	O15370	315 aa		12.55	□□□□□ -0.4
NUP85-223	ENST00000583877	SGIP1	Q9BQI5	828 aa		12.55	□□□□□ -0.4
NUP85-223	ENST00000583877	KTN1	Q86UP2	1357 aa	Known RBP	12.55	□□□□□ -0.4
NUP85-223	ENST00000583877	L3MBTL2	Q969R5	705 aa		12.53	□□□□□ -0.4
NUP85-223	ENST00000583877	LY75	O60449	1722 aa		12.53	□□□□□ -0.4
NUP85-223	ENST00000583877	MAP3K5	Q99683	1374 aa		12.53	□□□□□ -0.4
NUP85-223	ENST00000583877	RGPD2	P0DJD1	1756 aa		12.52	□□□□□ -0.41
NUP85-223	ENST00000583877	ERBB3	P21860	1342 aa		12.52	□□□□□ -0.41
NUP85-223	ENST00000583877	USP31	Q70CQ4	1352 aa		12.52	□□□□□ -0.41
NUP85-223	ENST00000583877	ACSBG1	Q96GR2	724 aa		12.51	□□□□□ -0.41
NUP85-223	ENST00000583877	ARX	Q96QS3	562 aa		12.51	□□□□□ -0.41
NUP85-223	ENST00000583877	ROCK2	O75116	1388 aa	Known RBP	12.51	□□□□□ -0.41
NUP85-223	ENST00000583877	DOT1L	Q8TEK3	1739 aa		12.51	□□□□□ -0.41
NUP85-223	ENST00000583877	IL2RB	P14784	551 aa		12.5	□□□□□ -0.41
NUP85-223	ENST00000583877	SHANK3	Q9BYB0	1731 aa		12.5	□□□□□ -0.41
NUP85-223	ENST00000583877	CD163L1	Q9NR16	1453 aa		12.49	□□□□□ -0.41
NUP85-223	ENST00000583877	SBNO2	Q9Y2G9	1366 aa		12.49	□□□□□ -0.41
NUP85-223	ENST00000583877	NLRP2	Q9NX02	1062 aa		12.49	□□□□□ -0.41
NUP85-223	ENST00000583877	SUGP2	Q8IX01	1082 aa	Known RBP eCLIP	12.48	□□□□□ -0.41
NUP85-223	ENST00000583877	C1QTNF8	P60827	252 aa		12.47	□□□□□ -0.41
NUP85-223	ENST00000583877	ZNF827	Q17R98	1081 aa		12.47	□□□□□ -0.41
NUP85-223	ENST00000583877	ANKRD24	Q8TF21	1146 aa		12.47	□□□□□ -0.41
NUP85-223	ENST00000583877	LRRC4B	Q9NT99	713 aa		12.47	□□□□□ -0.41

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