RNA–Protein interactions for RNA: ENST00000583249.5

ATG13-230, Transcript of autophagy related 13, humanhuman

TSL 5

Gene ATG13, Length 544 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG13-230ENST00000583249 NSD3Q9BZ95 1437 aa24.17■■□□□ 1.46
ATG13-230ENST00000583249 UPF1Q92900 1129 aaKnown RBP eCLIP24.16■■□□□ 1.461e-7■■■■□ 20.6
ATG13-230ENST00000583249 CARD14Q9BXL6 1004 aa24.16■■□□□ 1.46
ATG13-230ENST00000583249 USP35Q9P2H5 1018 aa24.16■■□□□ 1.46
ATG13-230ENST00000583249 AXIN2Q9Y2T1 843 aa24.16■■□□□ 1.46
ATG13-230ENST00000583249 THRAP3Q9Y2W1 955 aaKnown RBP24.16■■□□□ 1.46
ATG13-230ENST00000583249 COL18A1P39060 1754 aa24.16■■□□□ 1.46
ATG13-230ENST00000583249 TCP11L2Q8N4U5 519 aa24.15■■□□□ 1.46
ATG13-230ENST00000583249 GGNBP2Q9H3C7 697 aa24.15■■□□□ 1.46
ATG13-230ENST00000583249 CRB1P82279 1406 aa24.15■■□□□ 1.46
ATG13-230ENST00000583249 BARGINQ6ZT62 677 aa24.14■■□□□ 1.45
ATG13-230ENST00000583249 TOM1L2Q6ZVM7 507 aa24.14■■□□□ 1.45
ATG13-230ENST00000583249 WDR17Q8IZU2 1322 aa24.13■■□□□ 1.45
ATG13-230ENST00000583249 C11orf95C9JLR9 678 aaPredicted RBP24.13■■□□□ 1.45
ATG13-230ENST00000583249 CSB-PGBD3P0DP91 1061 aa24.13■■□□□ 1.45
ATG13-230ENST00000583249 KRT27Q7Z3Y8 459 aa24.13■■□□□ 1.45
ATG13-230ENST00000583249 CGNL1Q0VF96 1302 aa24.12■■□□□ 1.45
ATG13-230ENST00000583249 PANK3Q9H999 370 aa24.11■■□□□ 1.45
ATG13-230ENST00000583249 KIF20BQ96Q89 1820 aa24.11■■□□□ 1.45
ATG13-230ENST00000583249 LTN1O94822 1766 aa24.1■■□□□ 1.45
ATG13-230ENST00000583249 KIF7Q2M1P5 1343 aa24.09■■□□□ 1.45
ATG13-230ENST00000583249 BRWD3Q6RI45 1802 aa24.08■■□□□ 1.45
ATG13-230ENST00000583249 AMPHP49418 695 aa24.08■■□□□ 1.45
ATG13-230ENST00000583249 IP6K1Q92551 441 aa24.08■■□□□ 1.45
ATG13-230ENST00000583249 THSD7AQ9UPZ6 1657 aa24.08■■□□□ 1.44
ATG13-230ENST00000583249 RGPD5Q99666 1765 aa24.07■■□□□ 1.44
ATG13-230ENST00000583249 CARD10Q9BWT7 1032 aa24.07■■□□□ 1.44
ATG13-230ENST00000583249 BLMP54132 1417 aaPredicted RBP24.07■■□□□ 1.44
ATG13-230ENST00000583249 CCDC125Q86Z20 511 aa24.06■■□□□ 1.44
ATG13-230ENST00000583249 ERBB3P21860 1342 aa24.06■■□□□ 1.44
ATG13-230ENST00000583249 MAP3K19Q56UN5 1328 aa24.06■■□□□ 1.44
ATG13-230ENST00000583249 PDE3BQ13370 1112 aa24.04■■□□□ 1.44
ATG13-230ENST00000583249 ANKRD24Q8TF21 1146 aa24.04■■□□□ 1.44
ATG13-230ENST00000583249 CDCA7Q9BWT1 371 aaPredicted RBP24.04■■□□□ 1.44
ATG13-230ENST00000583249 CCDC7Q96M83 1385 aa24.03■■□□□ 1.44
ATG13-230ENST00000583249 FBLN1P23142 703 aa24.03■■□□□ 1.44
ATG13-230ENST00000583249 RTL1A6NKG5 1358 aa24.03■■□□□ 1.44
ATG13-230ENST00000583249 HOXC9P31274 260 aa24.02■■□□□ 1.44
ATG13-230ENST00000583249 RRS1Q15050 365 aaKnown RBP24.02■■□□□ 1.44
ATG13-230ENST00000583249 NLRP2Q9NX02 1062 aa24.02■■□□□ 1.44
ATG13-230ENST00000583249 KNSTRNQ9Y448 316 aa24.02■■□□□ 1.44
ATG13-230ENST00000583249 NSD2O96028 1365 aa24.01■■□□□ 1.43
ATG13-230ENST00000583249 KIF24Q5T7B8 1368 aa24■■□□□ 1.43
ATG13-230ENST00000583249 SF3B2Q13435 895 aaKnown RBP23.98■■□□□ 1.43
ATG13-230ENST00000583249 DDB1Q16531 1140 aa23.98■■□□□ 1.43
ATG13-230ENST00000583249 LTV1Q96GA3 475 aaPredicted RBP23.98■■□□□ 1.43
ATG13-230ENST00000583249 FAM196AQ6ZSG2 479 aa23.97■■□□□ 1.43
ATG13-230ENST00000583249 PARP4Q9UKK3 1724 aaKnown RBP23.96■■□□□ 1.43
ATG13-230ENST00000583249 FLT4P35916 1363 aa23.96■■□□□ 1.43
ATG13-230ENST00000583249 WASHC2AQ641Q2 1341 aa23.95■■□□□ 1.42
ATG13-230ENST00000583249 SMG6Q86US8 1419 aaKnown RBP23.94■■□□□ 1.42
ATG13-230ENST00000583249 ANKRD26Q9UPS8 1709 aa23.94■■□□□ 1.42
ATG13-230ENST00000583249 FAM208AQ9UK61 1670 aaKnown RBP23.94■■□□□ 1.42
ATG13-230ENST00000583249 INSRP06213 1382 aa23.93■■□□□ 1.42
ATG13-230ENST00000583249 FAM182BQ5T319 152 aa23.93■■□□□ 1.42
ATG13-230ENST00000583249 DISP2A7MBM2 1401 aa23.93■■□□□ 1.42
ATG13-230ENST00000583249 WNK3Q9BYP7 1800 aa23.92■■□□□ 1.42
ATG13-230ENST00000583249 EXOC5O00471 708 aa23.92■■□□□ 1.42
ATG13-230ENST00000583249 IL2RBP14784 551 aa23.92■■□□□ 1.42
ATG13-230ENST00000583249 MORC1Q86VD1 984 aa23.92■■□□□ 1.42
ATG13-230ENST00000583249 EMILIN1Q9Y6C2 1016 aa23.92■■□□□ 1.42
ATG13-230ENST00000583249 PPM1GO15355 546 aaPredicted RBP23.91■■□□□ 1.42
ATG13-230ENST00000583249 TNNT2P45379 298 aaPredicted RBP23.9■■□□□ 1.42
ATG13-230ENST00000583249 HSP90AB2PQ58FF8 381 aa23.9■■□□□ 1.42
ATG13-230ENST00000583249 LRRC37A3O60309 1634 aa23.89■■□□□ 1.42
ATG13-230ENST00000583249 AMER1Q5JTC6 1135 aaPredicted RBP23.89■■□□□ 1.41
ATG13-230ENST00000583249 POLKQ9UBT6 870 aa23.89■■□□□ 1.41
ATG13-230ENST00000583249 PER1O15534 1290 aaPredicted RBP23.88■■□□□ 1.41
ATG13-230ENST00000583249 ZEB1P37275 1124 aaPredicted RBP23.88■■□□□ 1.41
ATG13-230ENST00000583249 MAP2P11137 1827 aaKnown RBP23.88■■□□□ 1.41
ATG13-230ENST00000583249 OVOS2A0A0G2JMS6 1433 aa23.87■■□□□ 1.41
ATG13-230ENST00000583249 PEAK1Q9H792 1746 aa23.87■■□□□ 1.41
ATG13-230ENST00000583249 BAG6P46379 1132 aa23.86■■□□□ 1.41
ATG13-230ENST00000583249 EP400Q96L91 3159 aa23.85■■□□□ 1.41
ATG13-230ENST00000583249 TNS2Q63HR2 1409 aa23.84■■□□□ 1.41
ATG13-230ENST00000583249 RGPD1P0DJD0 1748 aa23.84■■□□□ 1.41
ATG13-230ENST00000583249 TRIM37O94972 964 aa23.84■■□□□ 1.41
ATG13-230ENST00000583249 NBPF6Q5VWK0 638 aa23.84■■□□□ 1.41
ATG13-230ENST00000583249 NBPF4Q96M43 638 aa23.84■■□□□ 1.41
ATG13-230ENST00000583249 MARCH10Q8NA82 808 aaPredicted RBP23.83■■□□□ 1.41
ATG13-230ENST00000583249 NPC1L1Q9UHC9 1359 aa23.81■■□□□ 1.4
ATG13-230ENST00000583249 DEFB132Q7Z7B7 95 aa23.81■■□□□ 1.4
ATG13-230ENST00000583249 BCL9O00512 1426 aa23.8■■□□□ 1.4
ATG13-230ENST00000583249 CC2D1BQ5T0F9 858 aaKnown RBP23.8■■□□□ 1.4
ATG13-230ENST00000583249 RAPGEF4Q8WZA2 1011 aa23.8■■□□□ 1.4
ATG13-230ENST00000583249 RGPD2P0DJD1 1756 aa23.8■■□□□ 1.4
ATG13-230ENST00000583249 TATP17735 454 aaPredicted RBP23.78■■□□□ 1.4
ATG13-230ENST00000583249 USHBP1Q8N6Y0 703 aa23.78■■□□□ 1.4
ATG13-230ENST00000583249 APBA3O96018 575 aa23.77■■□□□ 1.4
ATG13-230ENST00000583249 ZCRB1Q8TBF4 217 aaKnown RBP23.76■■□□□ 1.39
ATG13-230ENST00000583249 EN1Q05925 392 aaPredicted RBP23.75■■□□□ 1.39
ATG13-230ENST00000583249 EIF4A2Q14240 407 aaKnown RBP23.75■■□□□ 1.39
ATG13-230ENST00000583249 BCL11BQ9C0K0 894 aaPredicted RBP23.75■■□□□ 1.39
ATG13-230ENST00000583249 TNS1Q9HBL0 1735 aaKnown RBP23.75■■□□□ 1.39
ATG13-230ENST00000583249 DDX54Q8TDD1 881 aaKnown RBP23.74■■□□□ 1.39
ATG13-230ENST00000583249 EYA1Q99502 592 aa23.74■■□□□ 1.39
ATG13-230ENST00000583249 MEGF6O75095 1541 aa23.74■■□□□ 1.39
ATG13-230ENST00000583249 PARD3Q8TEW0 1356 aa23.72■■□□□ 1.39
ATG13-230ENST00000583249 SBF2Q86WG5 1849 aa23.71■■□□□ 1.39
ATG13-230ENST00000583249 NCAPD2Q15021 1401 aa23.71■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms