RNA–Protein interactions for RNA: ENST00000582985.1

DDX42-215, Transcript of DEAD-box helicase 42, human

TSL 4

Gene DDX42, Length 543 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDX42-215	ENST00000582985	PARP4	Q9UKK3	1724 aa	Known RBP	13.73	□□□□□ -0.21
DDX42-215	ENST00000582985	RREB1	Q92766	1687 aa		13.72	□□□□□ -0.21
DDX42-215	ENST00000582985	AATK	Q6ZMQ8	1374 aa		13.72	□□□□□ -0.21
DDX42-215	ENST00000582985	ZNF219	Q9P2Y4	722 aa	Predicted RBP	13.72	□□□□□ -0.21
DDX42-215	ENST00000582985	TRPM1	Q7Z4N2	1603 aa		13.72	□□□□□ -0.21
DDX42-215	ENST00000582985	SIN3A	Q96ST3	1273 aa		13.71	□□□□□ -0.21
DDX42-215	ENST00000582985	PIK3C2A	O00443	1686 aa		13.71	□□□□□ -0.21
DDX42-215	ENST00000582985	NUP188	Q5SRE5	1749 aa		13.7	□□□□□ -0.22
DDX42-215	ENST00000582985	C11orf95	C9JLR9	678 aa	Predicted RBP	13.7	□□□□□ -0.22
DDX42-215	ENST00000582985	ROCK2	O75116	1388 aa	Known RBP	13.7	□□□□□ -0.22
DDX42-215	ENST00000582985	NBPF14	Q5TI25	921 aa		13.69	□□□□□ -0.22
DDX42-215	ENST00000582985	TOM1L2	Q6ZVM7	507 aa		13.69	□□□□□ -0.22
DDX42-215	ENST00000582985	OVOS2	A0A0G2JMS6	1433 aa		13.69	□□□□□ -0.22
DDX42-215	ENST00000582985	OVOS2	A0A0J9YW53	1432 aa		13.69	□□□□□ -0.22
DDX42-215	ENST00000582985	OVOS2	Q6IE36	1432 aa		13.69	□□□□□ -0.22
DDX42-215	ENST00000582985	COL18A1	P39060	1754 aa		13.68	□□□□□ -0.22
DDX42-215	ENST00000582985	LRRC37A3	O60309	1634 aa		13.68	□□□□□ -0.22
DDX42-215	ENST00000582985	TTC21B	Q7Z4L5	1316 aa		13.68	□□□□□ -0.22
DDX42-215	ENST00000582985	PEAK1	Q9H792	1746 aa		13.68	□□□□□ -0.22
DDX42-215	ENST00000582985	CPSF1	Q10570	1443 aa	Known RBP	13.68	□□□□□ -0.22
DDX42-215	ENST00000582985	NEUROD1	Q13562	356 aa		13.68	□□□□□ -0.22
DDX42-215	ENST00000582985	ZNF692	Q9BU19	519 aa	Predicted RBP	13.68	□□□□□ -0.22
DDX42-215	ENST00000582985	AXIN2	Q9Y2T1	843 aa		13.68	□□□□□ -0.22
DDX42-215	ENST00000582985	WDR17	Q8IZU2	1322 aa		13.67	□□□□□ -0.22
DDX42-215	ENST00000582985	DDB1	Q16531	1140 aa		13.67	□□□□□ -0.22
DDX42-215	ENST00000582985	ARHGEF25	Q86VW2	580 aa		13.67	□□□□□ -0.22
DDX42-215	ENST00000582985	AKAP12	Q02952	1782 aa		13.66	□□□□□ -0.22
DDX42-215	ENST00000582985	KCNH5	Q8NCM2	988 aa		13.66	□□□□□ -0.22
DDX42-215	ENST00000582985	TTC21A	Q8NDW8	1320 aa		13.65	□□□□□ -0.22
DDX42-215	ENST00000582985	SOX12	O15370	315 aa		13.65	□□□□□ -0.22
DDX42-215	ENST00000582985	WNK3	Q9BYP7	1800 aa		13.64	□□□□□ -0.23
DDX42-215	ENST00000582985	KTN1	Q86UP2	1357 aa	Known RBP	13.64	□□□□□ -0.23
DDX42-215	ENST00000582985	PLSCR1	O15162	318 aa		13.64	□□□□□ -0.23
DDX42-215	ENST00000582985	CDCA7	Q9BWT1	371 aa	Predicted RBP	13.64	□□□□□ -0.23
DDX42-215	ENST00000582985	SBF2	Q86WG5	1849 aa		13.64	□□□□□ -0.23
DDX42-215	ENST00000582985	NFAT5	O94916	1531 aa		13.64	□□□□□ -0.23
DDX42-215	ENST00000582985	RGPD3	A6NKT7	1758 aa	Predicted RBP	13.63	□□□□□ -0.23
DDX42-215	ENST00000582985	RGPD4	Q7Z3J3	1758 aa		13.63	□□□□□ -0.23
DDX42-215	ENST00000582985	CSB-PGBD3	P0DP91	1061 aa		13.63	□□□□□ -0.23
DDX42-215	ENST00000582985	PTF1A	Q7RTS3	328 aa		13.63	□□□□□ -0.23
DDX42-215	ENST00000582985	MARCH10	Q8NA82	808 aa	Predicted RBP	13.63	□□□□□ -0.23
DDX42-215	ENST00000582985	CARD10	Q9BWT7	1032 aa		13.63	□□□□□ -0.23
DDX42-215	ENST00000582985	BCL11B	Q9C0K0	894 aa	Predicted RBP	13.63	□□□□□ -0.23
DDX42-215	ENST00000582985	SAMD1	Q6SPF0	538 aa	Predicted RBP	13.62	□□□□□ -0.23
DDX42-215	ENST00000582985	SPON1	Q9HCB6	807 aa		13.62	□□□□□ -0.23
DDX42-215	ENST00000582985	RGPD5	Q99666	1765 aa		13.62	□□□□□ -0.23
DDX42-215	ENST00000582985	BCL9	O00512	1426 aa		13.62	□□□□□ -0.23
DDX42-215	ENST00000582985	SBNO2	Q9Y2G9	1366 aa		13.61	□□□□□ -0.23
DDX42-215	ENST00000582985	KCNQ2	O43526	872 aa		13.61	□□□□□ -0.23
DDX42-215	ENST00000582985	ABCC6	O95255	1503 aa		13.6	□□□□□ -0.23
DDX42-215	ENST00000582985	MON2	Q7Z3U7	1717 aa		13.6	□□□□□ -0.23
DDX42-215	ENST00000582985	SUGP2	Q8IX01	1082 aa	Known RBP eCLIP	13.6	□□□□□ -0.23
DDX42-215	ENST00000582985	ANO8	Q9HCE9	1232 aa	Predicted RBP	13.6	□□□□□ -0.23
DDX42-215	ENST00000582985	CCDC7	Q96M83	1385 aa		13.59	□□□□□ -0.23
DDX42-215	ENST00000582985	EXOC5	O00471	708 aa		13.59	□□□□□ -0.23
DDX42-215	ENST00000582985	PROM2	Q8N271	834 aa		13.59	□□□□□ -0.23
DDX42-215	ENST00000582985	PPP1R1B	Q9UD71	204 aa	Predicted RBP	13.59	□□□□□ -0.23
DDX42-215	ENST00000582985	USP31	Q70CQ4	1352 aa		13.58	□□□□□ -0.23
DDX42-215	ENST00000582985	CARD11	Q9BXL7	1154 aa		13.58	□□□□□ -0.24
DDX42-215	ENST00000582985	CD163L1	Q9NR16	1453 aa		13.58	□□□□□ -0.24
DDX42-215	ENST00000582985	TNS2	Q63HR2	1409 aa		13.57	□□□□□ -0.24
DDX42-215	ENST00000582985	USP54	Q70EL1	1684 aa		13.57	□□□□□ -0.24
DDX42-215	ENST00000582985	NME9	Q86XW9	330 aa		13.57	□□□□□ -0.24
DDX42-215	ENST00000582985	CASZ1	Q86V15	1759 aa		13.56	□□□□□ -0.24
DDX42-215	ENST00000582985	TMC1	Q8TDI8	760 aa		13.56	□□□□□ -0.24
DDX42-215	ENST00000582985	ERBB3	P21860	1342 aa		13.56	□□□□□ -0.24
DDX42-215	ENST00000582985	NINL	Q9Y2I6	1382 aa		13.56	□□□□□ -0.24
DDX42-215	ENST00000582985	TXNRD1	Q16881	649 aa		13.55	□□□□□ -0.24
DDX42-215	ENST00000582985	HDGFL2	Q7Z4V5	671 aa	Predicted RBP	13.55	□□□□□ -0.24
DDX42-215	ENST00000582985	PDGFD	Q9GZP0	370 aa	Predicted RBP	13.55	□□□□□ -0.24
DDX42-215	ENST00000582985	SLC12A5	Q9H2X9	1139 aa		13.55	□□□□□ -0.24
DDX42-215	ENST00000582985	NLRP2	Q9NX02	1062 aa		13.55	□□□□□ -0.24
DDX42-215	ENST00000582985	EDC4	Q6P2E9	1401 aa	Known RBP	13.54	□□□□□ -0.24
DDX42-215	ENST00000582985	LTN1	O94822	1766 aa		13.53	□□□□□ -0.24
DDX42-215	ENST00000582985	ZBTB7A	O95365	584 aa		13.53	□□□□□ -0.24
DDX42-215	ENST00000582985	YY1	P25490	414 aa		13.53	□□□□□ -0.24
DDX42-215	ENST00000582985	ANKRD24	Q8TF21	1146 aa		13.53	□□□□□ -0.24
DDX42-215	ENST00000582985	STK32B	Q9NY57	414 aa		13.53	□□□□□ -0.24
DDX42-215	ENST00000582985	IL2RB	P14784	551 aa		13.52	□□□□□ -0.25
DDX42-215	ENST00000582985	SLC15A2	Q16348	729 aa		13.52	□□□□□ -0.25
DDX42-215	ENST00000582985	ACSBG1	Q96GR2	724 aa		13.52	□□□□□ -0.25
DDX42-215	ENST00000582985	TERF2IP	Q9NYB0	399 aa		13.52	□□□□□ -0.25
DDX42-215	ENST00000582985		A0A1W2PP64	1363 aa		13.52	□□□□□ -0.25
DDX42-215	ENST00000582985	TONSL	Q96HA7	1378 aa		13.52	□□□□□ -0.25
DDX42-215	ENST00000582985	NHS	Q6T4R5	1651 aa		13.52	□□□□□ -0.25
DDX42-215	ENST00000582985	PUS7	Q96PZ0	661 aa	Known RBP	13.51	□□□□□ -0.25
DDX42-215	ENST00000582985	PTGER2	P43116	358 aa		13.5	□□□□□ -0.25
DDX42-215	ENST00000582985	ATF5	Q9Y2D1	282 aa	Predicted RBP	13.5	□□□□□ -0.25
DDX42-215	ENST00000582985	MYCN	P04198	464 aa	Predicted RBP	13.49	□□□□□ -0.25
DDX42-215	ENST00000582985	MYOM1	P52179	1685 aa		13.49	□□□□□ -0.25
DDX42-215	ENST00000582985	IP6K1	Q92551	441 aa		13.48	□□□□□ -0.25
DDX42-215	ENST00000582985	TESK2	Q96S53	571 aa		13.48	□□□□□ -0.25
DDX42-215	ENST00000582985	MTFR1L	Q9H019	292 aa		13.47	□□□□□ -0.25
DDX42-215	ENST00000582985	BTAF1	O14981	1849 aa		13.47	□□□□□ -0.25
DDX42-215	ENST00000582985	PAPPA	Q13219	1627 aa		13.46	□□□□□ -0.25
DDX42-215	ENST00000582985	ST20-MTHFS	A0A0A6YYL1	179 aa		13.46	□□□□□ -0.25
DDX42-215	ENST00000582985	LTV1	Q96GA3	475 aa	Predicted RBP	13.46	□□□□□ -0.25
DDX42-215	ENST00000582985	COG3	Q96JB2	828 aa		13.45	□□□□□ -0.26
DDX42-215	ENST00000582985	SGIP1	Q9BQI5	828 aa		13.45	□□□□□ -0.26
DDX42-215	ENST00000582985	MAP3K19	Q56UN5	1328 aa		13.44	□□□□□ -0.26

Retrieved 100 of 20,778 RNA–protein pairs in 124.1 ms