RNA–Protein interactions for RNA: ENST00000582590.1

SLC46A1-203, Transcript of solute carrier family 46 member 1, humanhuman

TSL 2

Gene SLC46A1, Length 1,435 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC46A1-203ENST00000582590 SOCS7O14512 581 aa26.22■■□□□ 1.79
SLC46A1-203ENST00000582590 AXIN2Q9Y2T1 843 aa26.22■■□□□ 1.79
SLC46A1-203ENST00000582590 COL18A1P39060 1754 aa26.22■■□□□ 1.79
SLC46A1-203ENST00000582590 KIF20BQ96Q89 1820 aa26.21■■□□□ 1.79
SLC46A1-203ENST00000582590 ZEB1P37275 1124 aaPredicted RBP26.2■■□□□ 1.78
SLC46A1-203ENST00000582590 LARP1Q6PKG0 1096 aaKnown RBP26.2■■□□□ 1.78
SLC46A1-203ENST00000582590 ABCC6O95255 1503 aa26.2■■□□□ 1.78
SLC46A1-203ENST00000582590 SPATA31A1Q5TZJ5 1347 aa26.18■■□□□ 1.78
SLC46A1-203ENST00000582590 FBLN1P23142 703 aa26.17■■□□□ 1.78
SLC46A1-203ENST00000582590 ONECUT3O60422 494 aaPredicted RBP26.16■■□□□ 1.78
SLC46A1-203ENST00000582590 MAP3K19Q56UN5 1328 aa26.16■■□□□ 1.78
SLC46A1-203ENST00000582590 FAM98CQ17RN3 349 aaKnown RBP26.15■■□□□ 1.78
SLC46A1-203ENST00000582590 WDR17Q8IZU2 1322 aa26.14■■□□□ 1.77
SLC46A1-203ENST00000582590 LTN1O94822 1766 aa26.14■■□□□ 1.77
SLC46A1-203ENST00000582590 CRB1P82279 1406 aa26.14■■□□□ 1.77
SLC46A1-203ENST00000582590 SEPT12Q8IYM1 358 aa26.14■■□□□ 1.77
SLC46A1-203ENST00000582590 USP35Q9P2H5 1018 aa26.14■■□□□ 1.77
SLC46A1-203ENST00000582590 KNSTRNQ9Y448 316 aa26.14■■□□□ 1.77
SLC46A1-203ENST00000582590 RRS1Q15050 365 aaKnown RBP26.13■■□□□ 1.77
SLC46A1-203ENST00000582590 IP6K1Q92551 441 aa26.12■■□□□ 1.77
SLC46A1-203ENST00000582590 NSD2O96028 1365 aa26.11■■□□□ 1.77
SLC46A1-203ENST00000582590 TOM1L2Q6ZVM7 507 aa26.11■■□□□ 1.77
SLC46A1-203ENST00000582590 TCP11L2Q8N4U5 519 aa26.11■■□□□ 1.77
SLC46A1-203ENST00000582590 BLMP54132 1417 aaPredicted RBP26.11■■□□□ 1.77
SLC46A1-203ENST00000582590 CSB-PGBD3P0DP91 1061 aa26.1■■□□□ 1.77
SLC46A1-203ENST00000582590 AMPHP49418 695 aa26.1■■□□□ 1.77
SLC46A1-203ENST00000582590 ERBB3P21860 1342 aa26.1■■□□□ 1.77
SLC46A1-203ENST00000582590 A0A0G2JS52 829 aa26.09■■□□□ 1.77
SLC46A1-203ENST00000582590 MYT1Q01538 1121 aa26.09■■□□□ 1.77
SLC46A1-203ENST00000582590 RTL1A6NKG5 1358 aa26.08■■□□□ 1.77
SLC46A1-203ENST00000582590 HOXC9P31274 260 aa26.08■■□□□ 1.77
SLC46A1-203ENST00000582590 BARGINQ6ZT62 677 aa26.08■■□□□ 1.77
SLC46A1-203ENST00000582590 THRAP3Q9Y2W1 955 aaKnown RBP26.08■■□□□ 1.77
SLC46A1-203ENST00000582590 RGPD5Q99666 1765 aa26.08■■□□□ 1.77
SLC46A1-203ENST00000582590 PER1O15534 1290 aaPredicted RBP26.07■■□□□ 1.76
SLC46A1-203ENST00000582590 AMER1Q5JTC6 1135 aaPredicted RBP26.07■■□□□ 1.76
SLC46A1-203ENST00000582590 ANKRD24Q8TF21 1146 aa26.07■■□□□ 1.76
SLC46A1-203ENST00000582590 THSD7AQ9UPZ6 1657 aa26.06■■□□□ 1.76
SLC46A1-203ENST00000582590 CARD10Q9BWT7 1032 aa26.05■■□□□ 1.76
SLC46A1-203ENST00000582590 ANKRD26Q9UPS8 1709 aa26.05■■□□□ 1.76
SLC46A1-203ENST00000582590 EMILIN1Q9Y6C2 1016 aa26.04■■□□□ 1.76
SLC46A1-203ENST00000582590 KIF24Q5T7B8 1368 aa26.03■■□□□ 1.76
SLC46A1-203ENST00000582590 TNNT2P45379 298 aaPredicted RBP26.03■■□□□ 1.76
SLC46A1-203ENST00000582590 KRT27Q7Z3Y8 459 aa26.02■■□□□ 1.76
SLC46A1-203ENST00000582590 MORC1Q86VD1 984 aa26.02■■□□□ 1.76
SLC46A1-203ENST00000582590 LTV1Q96GA3 475 aaPredicted RBP26.02■■□□□ 1.76
SLC46A1-203ENST00000582590 NLRP2Q9NX02 1062 aa26.02■■□□□ 1.76
SLC46A1-203ENST00000582590 FLT4P35916 1363 aa26.02■■□□□ 1.76
SLC46A1-203ENST00000582590 PEAK1Q9H792 1746 aa26■■□□□ 1.75
SLC46A1-203ENST00000582590 POLKQ9UBT6 870 aa26■■□□□ 1.75
SLC46A1-203ENST00000582590 INSRP06213 1382 aa25.99■■□□□ 1.75
SLC46A1-203ENST00000582590 HSP90AB2PQ58FF8 381 aa25.99■■□□□ 1.75
SLC46A1-203ENST00000582590 BRWD3Q6RI45 1802 aa25.99■■□□□ 1.75
SLC46A1-203ENST00000582590 PPM1GO15355 546 aaPredicted RBP25.98■■□□□ 1.75
SLC46A1-203ENST00000582590 UPF1Q92900 1129 aaKnown RBP eCLIP25.97■■□□□ 1.75
SLC46A1-203ENST00000582590 NPC1L1Q9UHC9 1359 aa25.96■■□□□ 1.75
SLC46A1-203ENST00000582590 CC2D1BQ5T0F9 858 aaKnown RBP25.96■■□□□ 1.75
SLC46A1-203ENST00000582590 DISP2A7MBM2 1401 aa25.95■■□□□ 1.75
SLC46A1-203ENST00000582590 CDCA7Q9BWT1 371 aaPredicted RBP25.95■■□□□ 1.74
SLC46A1-203ENST00000582590 SMG6Q86US8 1419 aaKnown RBP25.95■■□□□ 1.74
SLC46A1-203ENST00000582590 FAM208AQ9UK61 1670 aaKnown RBP25.93■■□□□ 1.74
SLC46A1-203ENST00000582590 PARP4Q9UKK3 1724 aaKnown RBP25.92■■□□□ 1.74
SLC46A1-203ENST00000582590 PDE3BQ13370 1112 aa25.92■■□□□ 1.74
SLC46A1-203ENST00000582590 LRRC37A3O60309 1634 aa25.9■■□□□ 1.74
SLC46A1-203ENST00000582590 WNK3Q9BYP7 1800 aa25.9■■□□□ 1.74
SLC46A1-203ENST00000582590 DDB1Q16531 1140 aa25.9■■□□□ 1.74
SLC46A1-203ENST00000582590 FAM182BQ5T319 152 aa25.9■■□□□ 1.74
SLC46A1-203ENST00000582590 NBPF6Q5VWK0 638 aa25.9■■□□□ 1.74
SLC46A1-203ENST00000582590 NBPF4Q96M43 638 aa25.9■■□□□ 1.74
SLC46A1-203ENST00000582590 MAP2P11137 1827 aaKnown RBP25.9■■□□□ 1.74
SLC46A1-203ENST00000582590 IL2RBP14784 551 aa25.89■■□□□ 1.74
SLC46A1-203ENST00000582590 CNGB1Q14028 1251 aaPredicted RBP25.89■■□□□ 1.74
SLC46A1-203ENST00000582590 EP400Q96L91 3159 aa25.88■■□□□ 1.73
SLC46A1-203ENST00000582590 USHBP1Q8N6Y0 703 aa25.86■■□□□ 1.73
SLC46A1-203ENST00000582590 TNS2Q63HR2 1409 aa25.84■■□□□ 1.73
SLC46A1-203ENST00000582590 EXOC5O00471 708 aa25.84■■□□□ 1.73
SLC46A1-203ENST00000582590 EIF4A2Q14240 407 aaKnown RBP25.84■■□□□ 1.73
SLC46A1-203ENST00000582590 FAM196AQ6ZSG2 479 aa25.83■■□□□ 1.73
SLC46A1-203ENST00000582590 RGPD2P0DJD1 1756 aa25.83■■□□□ 1.73
SLC46A1-203ENST00000582590 CCDC125Q86Z20 511 aa25.82■■□□□ 1.72
SLC46A1-203ENST00000582590 MTHFSP49914 203 aa25.81■■□□□ 1.72
SLC46A1-203ENST00000582590 DDX10Q13206 875 aaKnown RBP25.81■■□□□ 1.72
SLC46A1-203ENST00000582590 MARCH10Q8NA82 808 aaPredicted RBP25.81■■□□□ 1.72
SLC46A1-203ENST00000582590 MEGF6O75095 1541 aa25.81■■□□□ 1.72
SLC46A1-203ENST00000582590 EYA1Q99502 592 aa25.8■■□□□ 1.72
SLC46A1-203ENST00000582590 OVOS2A0A0G2JMS6 1433 aa25.8■■□□□ 1.72
SLC46A1-203ENST00000582590 NCAPD2Q15021 1401 aa25.8■■□□□ 1.72
SLC46A1-203ENST00000582590 RAPGEF4Q8WZA2 1011 aa25.78■■□□□ 1.72
SLC46A1-203ENST00000582590 SF3B2Q13435 895 aaKnown RBP25.75■■□□□ 1.71
SLC46A1-203ENST00000582590 IGSF1Q8N6C5 1336 aa25.74■■□□□ 1.71
SLC46A1-203ENST00000582590 TRIM37O94972 964 aa25.74■■□□□ 1.71
SLC46A1-203ENST00000582590 TATP17735 454 aaPredicted RBP25.74■■□□□ 1.71
SLC46A1-203ENST00000582590 BCL9O00512 1426 aa25.74■■□□□ 1.71
SLC46A1-203ENST00000582590 ZCRB1Q8TBF4 217 aaKnown RBP25.73■■□□□ 1.71
SLC46A1-203ENST00000582590 IL13P35225 146 aa25.72■■□□□ 1.71
SLC46A1-203ENST00000582590 DDX54Q8TDD1 881 aaKnown RBP25.71■■□□□ 1.71
SLC46A1-203ENST00000582590 PPP2R1AP30153 589 aa25.71■■□□□ 1.71
SLC46A1-203ENST00000582590 PARD3Q8TEW0 1356 aa25.7■■□□□ 1.71
SLC46A1-203ENST00000582590 ZNF316A6NFI3 1004 aaPredicted RBP25.7■■□□□ 1.7
SLC46A1-203ENST00000582590 RGPD1P0DJD0 1748 aa25.69■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms