RNA–Protein interactions for RNA: ENST00000582370.1

PDLIM1P3-201, Transcript of PDZ and LIM domain 1 pseudogene 3, humanhuman

BASIC

Gene PDLIM1P3, Length 599 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1P3-201ENST00000582370 PAPPAQ13219 1627 aa12.58□□□□□ -0.4
PDLIM1P3-201ENST00000582370 MINK1Q8N4C8 1332 aaPredicted RBP12.58□□□□□ -0.4
PDLIM1P3-201ENST00000582370 AATKQ6ZMQ8 1374 aa12.57□□□□□ -0.4
PDLIM1P3-201ENST00000582370 STK32BQ9NY57 414 aa12.57□□□□□ -0.4
PDLIM1P3-201ENST00000582370 NHSQ6T4R5 1651 aa12.57□□□□□ -0.4
PDLIM1P3-201ENST00000582370 SLC15A2Q16348 729 aa12.56□□□□□ -0.4
PDLIM1P3-201ENST00000582370 POLR3AO14802 1390 aaPredicted RBP12.56□□□□□ -0.4
PDLIM1P3-201ENST00000582370 PROM2Q8N271 834 aa12.55□□□□□ -0.4
PDLIM1P3-201ENST00000582370 ARXQ96QS3 562 aa12.55□□□□□ -0.4
PDLIM1P3-201ENST00000582370 USP19O94966 1318 aa12.55□□□□□ -0.4
PDLIM1P3-201ENST00000582370 DDB1Q16531 1140 aa12.54□□□□□ -0.4
PDLIM1P3-201ENST00000582370 STAC3Q96MF2 364 aa12.54□□□□□ -0.4
PDLIM1P3-201ENST00000582370 COL18A1P39060 1754 aa12.53□□□□□ -0.4
PDLIM1P3-201ENST00000582370 TXNRD1Q16881 649 aa12.53□□□□□ -0.4
PDLIM1P3-201ENST00000582370 NUTM2GQ5VZR2 741 aa12.53□□□□□ -0.4
PDLIM1P3-201ENST00000582370 TRAK1Q9UPV9 953 aa12.53□□□□□ -0.4
PDLIM1P3-201ENST00000582370 RGPD5Q99666 1765 aa12.52□□□□□ -0.41
PDLIM1P3-201ENST00000582370 GPR162Q16538 588 aa12.52□□□□□ -0.41
PDLIM1P3-201ENST00000582370 NUDT16Q96DE0 195 aaKnown RBP12.52□□□□□ -0.41
PDLIM1P3-201ENST00000582370 PTF1AQ7RTS3 328 aa12.51□□□□□ -0.41
PDLIM1P3-201ENST00000582370 SLIT3O75094 1523 aa12.51□□□□□ -0.41
PDLIM1P3-201ENST00000582370 BTAF1O14981 1849 aa12.51□□□□□ -0.41
PDLIM1P3-201ENST00000582370 ABTB2Q8N961 1025 aa12.5□□□□□ -0.41
PDLIM1P3-201ENST00000582370 CDCA7Q9BWT1 371 aaPredicted RBP12.5□□□□□ -0.41
PDLIM1P3-201ENST00000582370 TUBGCP6Q96RT7 1819 aa12.49□□□□□ -0.41
PDLIM1P3-201ENST00000582370 ACEP12821 1306 aa12.49□□□□□ -0.41
PDLIM1P3-201ENST00000582370 GCP02774 474 aa12.49□□□□□ -0.41
PDLIM1P3-201ENST00000582370 TRPM1Q7Z4N2 1603 aa12.48□□□□□ -0.41
PDLIM1P3-201ENST00000582370 NLRP13Q86W25 1043 aa12.48□□□□□ -0.41
PDLIM1P3-201ENST00000582370 MARCH10Q8NA82 808 aaPredicted RBP12.48□□□□□ -0.41
PDLIM1P3-201ENST00000582370 BRD4O60885 1362 aaPredicted RBP12.47□□□□□ -0.41
PDLIM1P3-201ENST00000582370 TOM1L2Q6ZVM7 507 aa12.47□□□□□ -0.41
PDLIM1P3-201ENST00000582370 QRICH2Q9H0J4 1663 aa12.47□□□□□ -0.41
PDLIM1P3-201ENST00000582370 TNS2Q63HR2 1409 aa12.46□□□□□ -0.41
PDLIM1P3-201ENST00000582370 WDR17Q8IZU2 1322 aa12.46□□□□□ -0.41
PDLIM1P3-201ENST00000582370 PIK3C2AO00443 1686 aa12.46□□□□□ -0.41
PDLIM1P3-201ENST00000582370 PLEKHG3A1L390 1219 aa12.46□□□□□ -0.41
PDLIM1P3-201ENST00000582370 CCDC61Q9Y6R9 512 aa12.46□□□□□ -0.41
PDLIM1P3-201ENST00000582370 ABCC6O95255 1503 aa12.46□□□□□ -0.42
PDLIM1P3-201ENST00000582370 TONSLQ96HA7 1378 aa12.45□□□□□ -0.42
PDLIM1P3-201ENST00000582370 HSPA6P17066 643 aa12.45□□□□□ -0.42
PDLIM1P3-201ENST00000582370 KAT6BQ8WYB5 2073 aa12.45□□□□□ -0.42
PDLIM1P3-201ENST00000582370 ATP10DQ9P241 1426 aa12.45□□□□□ -0.42
PDLIM1P3-201ENST00000582370 PELP1Q8IZL8 1130 aaKnown RBP12.44□□□□□ -0.42
PDLIM1P3-201ENST00000582370 SLC16A10Q8TF71 515 aa12.44□□□□□ -0.42
PDLIM1P3-201ENST00000582370 KIAA1210Q9ULL0 1709 aa12.43□□□□□ -0.42
PDLIM1P3-201ENST00000582370 GRIN3BO60391 1043 aa12.43□□□□□ -0.42
PDLIM1P3-201ENST00000582370 POLD1P28340 1107 aa12.43□□□□□ -0.42
PDLIM1P3-201ENST00000582370 CDK19Q9BWU1 502 aa12.43□□□□□ -0.42
PDLIM1P3-201ENST00000582370 CPSF1Q10570 1443 aaKnown RBP12.43□□□□□ -0.42
PDLIM1P3-201ENST00000582370 KLHL34Q8N239 644 aa12.42□□□□□ -0.42
PDLIM1P3-201ENST00000582370 ZBTB7CA1YPR0 619 aa12.41□□□□□ -0.42
PDLIM1P3-201ENST00000582370 PPIP5K1Q6PFW1 1433 aa12.41□□□□□ -0.42
PDLIM1P3-201ENST00000582370 CARD10Q9BWT7 1032 aa12.41□□□□□ -0.42
PDLIM1P3-201ENST00000582370 CCDC7Q96M83 1385 aa12.41□□□□□ -0.42
PDLIM1P3-201ENST00000582370 EXOC5O00471 708 aa12.4□□□□□ -0.42
PDLIM1P3-201ENST00000582370 ZNF827Q17R98 1081 aa12.4□□□□□ -0.42
PDLIM1P3-201ENST00000582370 GPBP1L1Q9HC44 474 aaPredicted RBP12.4□□□□□ -0.42
PDLIM1P3-201ENST00000582370 ADCY9O60503 1353 aa12.4□□□□□ -0.42
PDLIM1P3-201ENST00000582370 LY75O60449 1722 aa12.4□□□□□ -0.43
PDLIM1P3-201ENST00000582370 USP6P35125 1406 aa12.39□□□□□ -0.43
PDLIM1P3-201ENST00000582370 NLGN2Q8NFZ4 835 aa12.39□□□□□ -0.43
PDLIM1P3-201ENST00000582370 NLRP6P59044 892 aa12.38□□□□□ -0.43
PDLIM1P3-201ENST00000582370 NEUROD1Q13562 356 aa12.38□□□□□ -0.43
PDLIM1P3-201ENST00000582370 AXIN2Q9Y2T1 843 aa12.38□□□□□ -0.43
PDLIM1P3-201ENST00000582370 YBX3P16989 372 aaKnown RBP eCLIP12.37□□□□□ -0.43
PDLIM1P3-201ENST00000582370 AKT1S1Q96B36 256 aa12.37□□□□□ -0.43
PDLIM1P3-201ENST00000582370 CSB-PGBD3P0DP91 1061 aa12.36□□□□□ -0.43
PDLIM1P3-201ENST00000582370 SIN3AQ96ST3 1273 aa12.36□□□□□ -0.43
PDLIM1P3-201ENST00000582370 NFAT5O94916 1531 aa12.36□□□□□ -0.43
PDLIM1P3-201ENST00000582370 PNPLA7Q6ZV29 1317 aa12.36□□□□□ -0.43
PDLIM1P3-201ENST00000582370 LTN1O94822 1766 aa12.35□□□□□ -0.43
PDLIM1P3-201ENST00000582370 SLC27A3Q5K4L6 730 aa12.35□□□□□ -0.43
PDLIM1P3-201ENST00000582370 DCAF11Q8TEB1 546 aa12.35□□□□□ -0.43
PDLIM1P3-201ENST00000582370 ACSBG1Q96GR2 724 aa12.35□□□□□ -0.43
PDLIM1P3-201ENST00000582370 LRRC4BQ9NT99 713 aa12.35□□□□□ -0.43
PDLIM1P3-201ENST00000582370 DOT1LQ8TEK3 1739 aa12.34□□□□□ -0.43
PDLIM1P3-201ENST00000582370 WDR90Q96KV7 1748 aa12.34□□□□□ -0.43
PDLIM1P3-201ENST00000582370 ARHGEF25Q86VW2 580 aa12.34□□□□□ -0.43
PDLIM1P3-201ENST00000582370 KCNH5Q8NCM2 988 aa12.34□□□□□ -0.43
PDLIM1P3-201ENST00000582370 KDM2AQ9Y2K7 1162 aa12.34□□□□□ -0.43
PDLIM1P3-201ENST00000582370 USP54Q70EL1 1684 aa12.34□□□□□ -0.43
PDLIM1P3-201ENST00000582370 FAM208AQ9UK61 1670 aaKnown RBP12.33□□□□□ -0.44
PDLIM1P3-201ENST00000582370 SRPK2P78362 688 aaKnown RBP12.33□□□□□ -0.44
PDLIM1P3-201ENST00000582370 L3MBTL2Q969R5 705 aa12.33□□□□□ -0.44
PDLIM1P3-201ENST00000582370 APLP1P51693 650 aa12.31□□□□□ -0.44
PDLIM1P3-201ENST00000582370 TFCP2L1Q9NZI6 479 aa12.31□□□□□ -0.44
PDLIM1P3-201ENST00000582370 C5P01031 1676 aa12.31□□□□□ -0.44
PDLIM1P3-201ENST00000582370 MON2Q7Z3U7 1717 aa12.31□□□□□ -0.44
PDLIM1P3-201ENST00000582370 CICQ96RK0 1608 aaPredicted RBP12.3□□□□□ -0.44
PDLIM1P3-201ENST00000582370 ZNF526Q8TF50 670 aaPredicted RBP12.3□□□□□ -0.44
PDLIM1P3-201ENST00000582370 TAF1LQ8IZX4 1826 aa12.29□□□□□ -0.44
PDLIM1P3-201ENST00000582370 ERBB3P21860 1342 aa12.29□□□□□ -0.44
PDLIM1P3-201ENST00000582370 KIF3CO14782 793 aa12.28□□□□□ -0.44
PDLIM1P3-201ENST00000582370 SLC24A1O60721 1099 aa12.28□□□□□ -0.44
PDLIM1P3-201ENST00000582370 IL2RBP14784 551 aa12.28□□□□□ -0.44
PDLIM1P3-201ENST00000582370 CABP2Q9NPB3 220 aa12.28□□□□□ -0.44
PDLIM1P3-201ENST00000582370 CD2APQ9Y5K6 639 aa12.28□□□□□ -0.44
PDLIM1P3-201ENST00000582370 CABP1Q9NZU7 370 aa12.27□□□□□ -0.45
PDLIM1P3-201ENST00000582370 TTC21AQ8NDW8 1320 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms