RNA–Protein interactions for RNA: ENST00000582331.2

CCDC47-205, Transcript of coiled-coil domain containing 47, humanhuman

TSL 3

Gene CCDC47, Length 693 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-205ENST00000582331 KDM2AQ9Y2K7 1162 aa11.23□□□□□ -0.61
CCDC47-205ENST00000582331 CPDO75976 1380 aa11.22□□□□□ -0.61
CCDC47-205ENST00000582331 ACEP12821 1306 aa11.22□□□□□ -0.61
CCDC47-205ENST00000582331 ITSN1Q15811 1721 aa11.21□□□□□ -0.61
CCDC47-205ENST00000582331 SENP3-EIF4A1A0A087X0R7 540 aa11.21□□□□□ -0.61
CCDC47-205ENST00000582331 SPDYE4A6NLX3 237 aa11.21□□□□□ -0.61
CCDC47-205ENST00000582331 ZBTB7AO95365 584 aa11.21□□□□□ -0.61
CCDC47-205ENST00000582331 CDK19Q9BWU1 502 aa11.21□□□□□ -0.61
CCDC47-205ENST00000582331 BCL11BQ9C0K0 894 aaPredicted RBP11.21□□□□□ -0.61
CCDC47-205ENST00000582331 ANO8Q9HCE9 1232 aaPredicted RBP11.21□□□□□ -0.61
CCDC47-205ENST00000582331 OVOS2A0A0G2JMS6 1433 aa11.2□□□□□ -0.62
CCDC47-205ENST00000582331 OVOS2A0A0J9YW53 1432 aa11.2□□□□□ -0.62
CCDC47-205ENST00000582331 OVOS2Q6IE36 1432 aa11.2□□□□□ -0.62
CCDC47-205ENST00000582331 POLR3AO14802 1390 aaPredicted RBP11.2□□□□□ -0.62
CCDC47-205ENST00000582331 GCP02774 474 aa11.2□□□□□ -0.62
CCDC47-205ENST00000582331 PRR29P0C7W0 189 aa11.2□□□□□ -0.62
CCDC47-205ENST00000582331 DDB1Q16531 1140 aa11.2□□□□□ -0.62
CCDC47-205ENST00000582331 NLRP13Q86W25 1043 aa11.2□□□□□ -0.62
CCDC47-205ENST00000582331 PDGFDQ9GZP0 370 aaPredicted RBP11.2□□□□□ -0.62
CCDC47-205ENST00000582331 CCDC61Q9Y6R9 512 aa11.2□□□□□ -0.62
CCDC47-205ENST00000582331 NRKQ7Z2Y5 1582 aa11.2□□□□□ -0.62
CCDC47-205ENST00000582331 PARP4Q9UKK3 1724 aaKnown RBP11.19□□□□□ -0.62
CCDC47-205ENST00000582331 PLEKHG3A1L390 1219 aa11.19□□□□□ -0.62
CCDC47-205ENST00000582331 PRKAR2AP13861 404 aaKnown RBP11.19□□□□□ -0.62
CCDC47-205ENST00000582331 PTGER2P43116 358 aa11.19□□□□□ -0.62
CCDC47-205ENST00000582331 C1QTNF8P60827 252 aa11.19□□□□□ -0.62
CCDC47-205ENST00000582331 DCAF11Q8TEB1 546 aa11.19□□□□□ -0.62
CCDC47-205ENST00000582331 LMO7Q8WWI1 1683 aa11.19□□□□□ -0.62
CCDC47-205ENST00000582331 CRB1P82279 1406 aa11.18□□□□□ -0.62
CCDC47-205ENST00000582331 CASZ1Q86V15 1759 aa11.18□□□□□ -0.62
CCDC47-205ENST00000582331 USP19O94966 1318 aa11.18□□□□□ -0.62
CCDC47-205ENST00000582331 PROM2Q8N271 834 aa11.18□□□□□ -0.62
CCDC47-205ENST00000582331 STAC3Q96MF2 364 aa11.18□□□□□ -0.62
CCDC47-205ENST00000582331 SYT17Q9BSW7 474 aa11.18□□□□□ -0.62
CCDC47-205ENST00000582331 FHDC1Q9C0D6 1143 aaPredicted RBP11.18□□□□□ -0.62
CCDC47-205ENST00000582331 RGPD3A6NKT7 1758 aaPredicted RBP11.18□□□□□ -0.62
CCDC47-205ENST00000582331 RGPD4Q7Z3J3 1758 aa11.18□□□□□ -0.62
CCDC47-205ENST00000582331 COL5A2P05997 1499 aaPredicted RBP11.18□□□□□ -0.62
CCDC47-205ENST00000582331 ZBTB7CA1YPR0 619 aa11.17□□□□□ -0.62
CCDC47-205ENST00000582331 PTF1AQ7RTS3 328 aa11.17□□□□□ -0.62
CCDC47-205ENST00000582331 STK32BQ9NY57 414 aa11.17□□□□□ -0.62
CCDC47-205ENST00000582331 PEAK1Q9H792 1746 aa11.17□□□□□ -0.62
CCDC47-205ENST00000582331 IFFO2Q5TF58 517 aa11.16□□□□□ -0.62
CCDC47-205ENST00000582331 TOM1L2Q6ZVM7 507 aa11.16□□□□□ -0.62
CCDC47-205ENST00000582331 MYOM1P52179 1685 aa11.16□□□□□ -0.62
CCDC47-205ENST00000582331 SBF2Q86WG5 1849 aa11.16□□□□□ -0.62
CCDC47-205ENST00000582331 HAX1O00165 279 aa11.15□□□□□ -0.62
CCDC47-205ENST00000582331 SLC15A2Q16348 729 aa11.15□□□□□ -0.62
CCDC47-205ENST00000582331 TXNRD1Q16881 649 aa11.15□□□□□ -0.62
CCDC47-205ENST00000582331 MARCH10Q8NA82 808 aaPredicted RBP11.15□□□□□ -0.62
CCDC47-205ENST00000582331 MTFR1LQ9H019 292 aa11.15□□□□□ -0.62
CCDC47-205ENST00000582331 AATKQ6ZMQ8 1374 aa11.15□□□□□ -0.63
CCDC47-205ENST00000582331 CDCA7Q9BWT1 371 aaPredicted RBP11.14□□□□□ -0.63
CCDC47-205ENST00000582331 ARHGEF28Q8N1W1 1705 aaKnown RBP11.14□□□□□ -0.63
CCDC47-205ENST00000582331 NLRP6P59044 892 aa11.13□□□□□ -0.63
CCDC47-205ENST00000582331 LRRC37A3O60309 1634 aa11.13□□□□□ -0.63
CCDC47-205ENST00000582331 UTRNP46939 3433 aa11.12□□□□□ -0.63
CCDC47-205ENST00000582331 BCL9O00512 1426 aa11.12□□□□□ -0.63
CCDC47-205ENST00000582331 TOPAZ1Q8N9V7 1692 aa11.12□□□□□ -0.63
CCDC47-205ENST00000582331 SRPK2P78362 688 aaKnown RBP11.12□□□□□ -0.63
CCDC47-205ENST00000582331 ARXQ96QS3 562 aa11.12□□□□□ -0.63
CCDC47-205ENST00000582331 SGIP1Q9BQI5 828 aa11.12□□□□□ -0.63
CCDC47-205ENST00000582331 BRD4O60885 1362 aaPredicted RBP11.12□□□□□ -0.63
CCDC47-205ENST00000582331 WDR17Q8IZU2 1322 aa11.11□□□□□ -0.63
CCDC47-205ENST00000582331 CHD4Q14839 1912 aa11.11□□□□□ -0.63
CCDC47-205ENST00000582331 EXOC5O00471 708 aa11.11□□□□□ -0.63
CCDC47-205ENST00000582331 SP7Q8TDD2 431 aaPredicted RBP11.11□□□□□ -0.63
CCDC47-205ENST00000582331 PPIP5K1Q6PFW1 1433 aa11.1□□□□□ -0.63
CCDC47-205ENST00000582331 GPR162Q16538 588 aa11.1□□□□□ -0.63
CCDC47-205ENST00000582331 AXIN2Q9Y2T1 843 aa11.1□□□□□ -0.63
CCDC47-205ENST00000582331 GIGYF1O75420 1035 aaPredicted RBP11.09□□□□□ -0.63
CCDC47-205ENST00000582331 CSB-PGBD3P0DP91 1061 aa11.09□□□□□ -0.63
CCDC47-205ENST00000582331 CARD10Q9BWT7 1032 aa11.09□□□□□ -0.63
CCDC47-205ENST00000582331 CABP2Q9NPB3 220 aa11.09□□□□□ -0.63
CCDC47-205ENST00000582331 MAP3K5Q99683 1374 aa11.08□□□□□ -0.64
CCDC47-205ENST00000582331 CABP1Q9NZU7 370 aa11.08□□□□□ -0.64
CCDC47-205ENST00000582331 SLIT3O75094 1523 aa11.08□□□□□ -0.64
CCDC47-205ENST00000582331 AKAP12Q02952 1782 aa11.08□□□□□ -0.64
CCDC47-205ENST00000582331 RAB3GAP2Q9H2M9 1393 aa11.07□□□□□ -0.64
CCDC47-205ENST00000582331 ARHGEF25Q86VW2 580 aa11.07□□□□□ -0.64
CCDC47-205ENST00000582331 COL18A1P39060 1754 aa11.07□□□□□ -0.64
CCDC47-205ENST00000582331 USP6P35125 1406 aa11.07□□□□□ -0.64
CCDC47-205ENST00000582331 CHADLQ6NUI6 762 aa11.06□□□□□ -0.64
CCDC47-205ENST00000582331 KCNH5Q8NCM2 988 aa11.06□□□□□ -0.64
CCDC47-205ENST00000582331 WNK3Q9BYP7 1800 aa11.06□□□□□ -0.64
CCDC47-205ENST00000582331 CPSF1Q10570 1443 aaKnown RBP11.05□□□□□ -0.64
CCDC47-205ENST00000582331 NBPF1Q3BBV0 1214 aa11.05□□□□□ -0.64
CCDC47-205ENST00000582331 PELP1Q8IZL8 1130 aaKnown RBP11.05□□□□□ -0.64
CCDC47-205ENST00000582331 KLHL34Q8N239 644 aa11.05□□□□□ -0.64
CCDC47-205ENST00000582331 ACSBG1Q96GR2 724 aa11.05□□□□□ -0.64
CCDC47-205ENST00000582331 CENPJQ9HC77 1338 aaPredicted RBP11.05□□□□□ -0.64
CCDC47-205ENST00000582331 CCDC7Q96M83 1385 aa11.04□□□□□ -0.64
CCDC47-205ENST00000582331 SOX12O15370 315 aa11.04□□□□□ -0.64
CCDC47-205ENST00000582331 SLC16A10Q8TF71 515 aa11.04□□□□□ -0.64
CCDC47-205ENST00000582331 CEP350Q5VT06 3117 aa11.03□□□□□ -0.64
CCDC47-205ENST00000582331 POLD1P28340 1107 aa11.03□□□□□ -0.64
CCDC47-205ENST00000582331 ZNF827Q17R98 1081 aa11.03□□□□□ -0.64
CCDC47-205ENST00000582331 TNS2Q63HR2 1409 aa11.02□□□□□ -0.64
CCDC47-205ENST00000582331 KIAA1210Q9ULL0 1709 aa11.02□□□□□ -0.65
CCDC47-205ENST00000582331 LRRC4BQ9NT99 713 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms