RNA–Protein interactions for RNA: ENST00000581525.1

SNORD55-201, Transcript of small nucleolar RNA, C/D box 55, humanhuman

BASIC

Gene SNORD55, Length 80 nt, Biotype snoRNA, Subcellular localisation Cytoplasm, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD55-201ENST00000581525 CCDC9Q9Y3X0 531 aaKnown RBP17.48■□□□□ 0.39
SNORD55-201ENST00000581525 WDR17Q8IZU2 1322 aa17.47■□□□□ 0.39
SNORD55-201ENST00000581525 IP6K1Q92551 441 aa17.47■□□□□ 0.39
SNORD55-201ENST00000581525 GGNBP2Q9H3C7 697 aa17.47■□□□□ 0.39
SNORD55-201ENST00000581525 PANK3Q9H999 370 aa17.47■□□□□ 0.39
SNORD55-201ENST00000581525 STRN4Q9NRL3 753 aa17.47■□□□□ 0.39
SNORD55-201ENST00000581525 EP400Q96L91 3159 aa17.47■□□□□ 0.39
SNORD55-201ENST00000581525 CRB1P82279 1406 aa17.47■□□□□ 0.39
SNORD55-201ENST00000581525 NSD3Q9BZ95 1437 aa17.47■□□□□ 0.39
SNORD55-201ENST00000581525 FAM98CQ17RN3 349 aaKnown RBP17.46■□□□□ 0.39
SNORD55-201ENST00000581525 TCP11L2Q8N4U5 519 aa17.46■□□□□ 0.39
SNORD55-201ENST00000581525 CGNL1Q0VF96 1302 aa17.46■□□□□ 0.38
SNORD55-201ENST00000581525 THSD7AQ9UPZ6 1657 aa17.45■□□□□ 0.38
SNORD55-201ENST00000581525 SOX12O15370 315 aa17.44■□□□□ 0.38
SNORD55-201ENST00000581525 CARD10Q9BWT7 1032 aa17.44■□□□□ 0.38
SNORD55-201ENST00000581525 KIF24Q5T7B8 1368 aa17.43■□□□□ 0.38
SNORD55-201ENST00000581525 PER1O15534 1290 aaPredicted RBP17.43■□□□□ 0.38
SNORD55-201ENST00000581525 BLMP54132 1417 aaPredicted RBP17.43■□□□□ 0.38
SNORD55-201ENST00000581525 ERBB3P21860 1342 aa17.43■□□□□ 0.38
SNORD55-201ENST00000581525 MAP3K19Q56UN5 1328 aa17.43■□□□□ 0.38
SNORD55-201ENST00000581525 FBLN1P23142 703 aa17.42■□□□□ 0.38
SNORD55-201ENST00000581525 KRT27Q7Z3Y8 459 aa17.42■□□□□ 0.38
SNORD55-201ENST00000581525 CCDC7Q96M83 1385 aa17.41■□□□□ 0.38
SNORD55-201ENST00000581525 ZBTB7CA1YPR0 619 aa17.41■□□□□ 0.38
SNORD55-201ENST00000581525 HOXC9P31274 260 aa17.41■□□□□ 0.38
SNORD55-201ENST00000581525 CCDC125Q86Z20 511 aa17.41■□□□□ 0.38
SNORD55-201ENST00000581525 POLR3GLQ9BT43 218 aa17.41■□□□□ 0.38
SNORD55-201ENST00000581525 WASHC2AQ641Q2 1341 aa17.41■□□□□ 0.38
SNORD55-201ENST00000581525 RTL1A6NKG5 1358 aa17.4■□□□□ 0.38
SNORD55-201ENST00000581525 TOM1L2Q6ZVM7 507 aa17.4■□□□□ 0.38
SNORD55-201ENST00000581525 NSD2O96028 1365 aa17.4■□□□□ 0.38
SNORD55-201ENST00000581525 CDCA7Q9BWT1 371 aaPredicted RBP17.39■□□□□ 0.37
SNORD55-201ENST00000581525 BRWD3Q6RI45 1802 aa17.39■□□□□ 0.37
SNORD55-201ENST00000581525 KIF20BQ96Q89 1820 aa17.38■□□□□ 0.37
SNORD55-201ENST00000581525 ANKRD24Q8TF21 1146 aa17.38■□□□□ 0.37
SNORD55-201ENST00000581525 LTN1O94822 1766 aa17.38■□□□□ 0.37
SNORD55-201ENST00000581525 RGPD5Q99666 1765 aa17.38■□□□□ 0.37
SNORD55-201ENST00000581525 DISP2A7MBM2 1401 aa17.38■□□□□ 0.37
SNORD55-201ENST00000581525 RRS1Q15050 365 aaKnown RBP17.37■□□□□ 0.37
SNORD55-201ENST00000581525 AMER1Q5JTC6 1135 aaPredicted RBP17.37■□□□□ 0.37
SNORD55-201ENST00000581525 USP35Q9P2H5 1018 aa17.37■□□□□ 0.37
SNORD55-201ENST00000581525 AMPHP49418 695 aa17.36■□□□□ 0.37
SNORD55-201ENST00000581525 KNSTRNQ9Y448 316 aa17.36■□□□□ 0.37
SNORD55-201ENST00000581525 INSRP06213 1382 aa17.36■□□□□ 0.37
SNORD55-201ENST00000581525 POLKQ9UBT6 870 aa17.35■□□□□ 0.37
SNORD55-201ENST00000581525 NPC1L1Q9UHC9 1359 aa17.35■□□□□ 0.37
SNORD55-201ENST00000581525 CSB-PGBD3P0DP91 1061 aa17.34■□□□□ 0.37
SNORD55-201ENST00000581525 FLT4P35916 1363 aa17.34■□□□□ 0.37
SNORD55-201ENST00000581525 PARP4Q9UKK3 1724 aaKnown RBP17.34■□□□□ 0.37
SNORD55-201ENST00000581525 EMILIN1Q9Y6C2 1016 aa17.33■□□□□ 0.36
SNORD55-201ENST00000581525 BCL9O00512 1426 aa17.32■□□□□ 0.36
SNORD55-201ENST00000581525 HSP90AB2PQ58FF8 381 aa17.32■□□□□ 0.36
SNORD55-201ENST00000581525 FAM196AQ6ZSG2 479 aa17.32■□□□□ 0.36
SNORD55-201ENST00000581525 NLRP2Q9NX02 1062 aa17.32■□□□□ 0.36
SNORD55-201ENST00000581525 ANKRD26Q9UPS8 1709 aa17.31■□□□□ 0.36
SNORD55-201ENST00000581525 A0A0G2JS52 829 aa17.31■□□□□ 0.36
SNORD55-201ENST00000581525 MYT1Q01538 1121 aa17.31■□□□□ 0.36
SNORD55-201ENST00000581525 PDE3BQ13370 1112 aa17.31■□□□□ 0.36
SNORD55-201ENST00000581525 PEAK1Q9H792 1746 aa17.3■□□□□ 0.36
SNORD55-201ENST00000581525 ZEB1P37275 1124 aaPredicted RBP17.3■□□□□ 0.36
SNORD55-201ENST00000581525 DDB1Q16531 1140 aa17.3■□□□□ 0.36
SNORD55-201ENST00000581525 NBPF6Q5VWK0 638 aa17.3■□□□□ 0.36
SNORD55-201ENST00000581525 NBPF4Q96M43 638 aa17.3■□□□□ 0.36
SNORD55-201ENST00000581525 SMG6Q86US8 1419 aaKnown RBP17.3■□□□□ 0.36
SNORD55-201ENST00000581525 EXOC5O00471 708 aa17.29■□□□□ 0.36
SNORD55-201ENST00000581525 IL2RBP14784 551 aa17.29■□□□□ 0.36
SNORD55-201ENST00000581525 FAM208AQ9UK61 1670 aaKnown RBP17.29■□□□□ 0.36
SNORD55-201ENST00000581525 MORC1Q86VD1 984 aa17.28■□□□□ 0.36
SNORD55-201ENST00000581525 NCAPD2Q15021 1401 aa17.28■□□□□ 0.36
SNORD55-201ENST00000581525 FAM182BQ5T319 152 aa17.27■□□□□ 0.36
SNORD55-201ENST00000581525 MARCH10Q8NA82 808 aaPredicted RBP17.27■□□□□ 0.36
SNORD55-201ENST00000581525 MAP2P11137 1827 aaKnown RBP17.26■□□□□ 0.35
SNORD55-201ENST00000581525 WNK3Q9BYP7 1800 aa17.26■□□□□ 0.35
SNORD55-201ENST00000581525 LTV1Q96GA3 475 aaPredicted RBP17.26■□□□□ 0.35
SNORD55-201ENST00000581525 LRRC37A3O60309 1634 aa17.25■□□□□ 0.35
SNORD55-201ENST00000581525 TNS2Q63HR2 1409 aa17.25■□□□□ 0.35
SNORD55-201ENST00000581525 OVOS2A0A0G2JMS6 1433 aa17.23■□□□□ 0.35
SNORD55-201ENST00000581525 TNNT2P45379 298 aaPredicted RBP17.22■□□□□ 0.35
SNORD55-201ENST00000581525 EIF4A2Q14240 407 aaKnown RBP17.22■□□□□ 0.35
SNORD55-201ENST00000581525 EYA1Q99502 592 aa17.22■□□□□ 0.35
SNORD55-201ENST00000581525 PLEKHG2Q9H7P9 1386 aa17.22■□□□□ 0.35
SNORD55-201ENST00000581525 PPM1GO15355 546 aaPredicted RBP17.21■□□□□ 0.35
SNORD55-201ENST00000581525 TRIM37O94972 964 aa17.2■□□□□ 0.34
SNORD55-201ENST00000581525 SF3B2Q13435 895 aaKnown RBP17.2■□□□□ 0.34
SNORD55-201ENST00000581525 ZCRB1Q8TBF4 217 aaKnown RBP17.2■□□□□ 0.34
SNORD55-201ENST00000581525 BAG6P46379 1132 aa17.19■□□□□ 0.34
SNORD55-201ENST00000581525 BCL11BQ9C0K0 894 aaPredicted RBP17.19■□□□□ 0.34
SNORD55-201ENST00000581525 RGPD2P0DJD1 1756 aa17.19■□□□□ 0.34
SNORD55-201ENST00000581525 IGSF1Q8N6C5 1336 aa17.19■□□□□ 0.34
SNORD55-201ENST00000581525 MEGF6O75095 1541 aa17.18■□□□□ 0.34
SNORD55-201ENST00000581525 CC2D1BQ5T0F9 858 aaKnown RBP17.18■□□□□ 0.34
SNORD55-201ENST00000581525 DEFB132Q7Z7B7 95 aa17.18■□□□□ 0.34
SNORD55-201ENST00000581525 CAMKK2Q96RR4 588 aa17.18■□□□□ 0.34
SNORD55-201ENST00000581525 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.18■□□□□ 0.34
SNORD55-201ENST00000581525 RGPD1P0DJD0 1748 aa17.18■□□□□ 0.34
SNORD55-201ENST00000581525 PLSCR1O15162 318 aa17.17■□□□□ 0.34
SNORD55-201ENST00000581525 IL13P35225 146 aa17.17■□□□□ 0.34
SNORD55-201ENST00000581525 MTHFSP49914 203 aa17.17■□□□□ 0.34
SNORD55-201ENST00000581525 USHBP1Q8N6Y0 703 aa17.17■□□□□ 0.34
SNORD55-201ENST00000581525 RAPGEF4Q8WZA2 1011 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms