RNA–Protein interactions for RNA: ENST00000580497.1

PMP22-207, Transcript of peripheral myelin protein 22, humanhuman

TSL 3

Gene PMP22, Length 576 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMP22-207ENST00000580497 RTL1A6NKG5 1358 aa11.2□□□□□ -0.62
PMP22-207ENST00000580497 ZBTB7CA1YPR0 619 aa11.2□□□□□ -0.62
PMP22-207ENST00000580497 CAMTA1Q9Y6Y1 1673 aa11.2□□□□□ -0.62
PMP22-207ENST00000580497 KIF24Q5T7B8 1368 aa11.19□□□□□ -0.62
PMP22-207ENST00000580497 JCADQ9P266 1359 aa11.19□□□□□ -0.62
PMP22-207ENST00000580497 AMPHP49418 695 aa11.19□□□□□ -0.62
PMP22-207ENST00000580497 CHRNA2Q15822 529 aa11.19□□□□□ -0.62
PMP22-207ENST00000580497 IP6K1Q92551 441 aa11.19□□□□□ -0.62
PMP22-207ENST00000580497 CFAP53Q96M91 514 aa11.19□□□□□ -0.62
PMP22-207ENST00000580497 AXIN2Q9Y2T1 843 aa11.19□□□□□ -0.62
PMP22-207ENST00000580497 FAM208AQ9UK61 1670 aaKnown RBP11.19□□□□□ -0.62
PMP22-207ENST00000580497 LRP6O75581 1613 aa11.19□□□□□ -0.62
PMP22-207ENST00000580497 DIAPH1O60610 1272 aaKnown RBP11.18□□□□□ -0.62
PMP22-207ENST00000580497 IL13P35225 146 aa11.18□□□□□ -0.62
PMP22-207ENST00000580497 EIF4A2Q14240 407 aaKnown RBP11.18□□□□□ -0.62
PMP22-207ENST00000580497 FAM9BQ8IZU0 186 aa11.18□□□□□ -0.62
PMP22-207ENST00000580497 NWD2Q9ULI1 1742 aa11.18□□□□□ -0.62
PMP22-207ENST00000580497 FAM83GA6ND36 823 aa11.17□□□□□ -0.62
PMP22-207ENST00000580497 HAP1P54257 671 aaPredicted RBP11.17□□□□□ -0.62
PMP22-207ENST00000580497 BLMP54132 1417 aaPredicted RBP11.17□□□□□ -0.62
PMP22-207ENST00000580497 NUTM2BA6NNL0 878 aaPredicted RBP11.16□□□□□ -0.62
PMP22-207ENST00000580497 NUTM2EB1AL46 878 aaPredicted RBP11.16□□□□□ -0.62
PMP22-207ENST00000580497 NUTM2AQ8IVF1 878 aaPredicted RBP11.16□□□□□ -0.62
PMP22-207ENST00000580497 LTV1Q96GA3 475 aaPredicted RBP11.16□□□□□ -0.62
PMP22-207ENST00000580497 PRDM11Q9NQV5 511 aa11.16□□□□□ -0.62
PMP22-207ENST00000580497 ADAMTS8Q9UP79 889 aa11.16□□□□□ -0.62
PMP22-207ENST00000580497 DLG5Q8TDM6 1919 aa11.15□□□□□ -0.62
PMP22-207ENST00000580497 COL5A2P05997 1499 aaPredicted RBP11.15□□□□□ -0.62
PMP22-207ENST00000580497 WNK3Q9BYP7 1800 aa11.15□□□□□ -0.62
PMP22-207ENST00000580497 ADAMTS2O95450 1211 aa11.15□□□□□ -0.62
PMP22-207ENST00000580497 U2SURPO15042 1029 aaKnown RBP11.14□□□□□ -0.63
PMP22-207ENST00000580497 WDR43Q15061 677 aaKnown RBP eCLIP11.14□□□□□ -0.63
PMP22-207ENST00000580497 ANKRD24Q8TF21 1146 aa11.14□□□□□ -0.63
PMP22-207ENST00000580497 FBXO41Q8TF61 875 aa11.14□□□□□ -0.63
PMP22-207ENST00000580497 SPATA31A6Q5VVP1 1343 aa11.13□□□□□ -0.63
PMP22-207ENST00000580497 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.13□□□□□ -0.63
PMP22-207ENST00000580497 SENP3-EIF4A1A0A087X0R7 540 aa11.13□□□□□ -0.63
PMP22-207ENST00000580497 AEBP1Q8IUX7 1158 aa11.13□□□□□ -0.63
PMP22-207ENST00000580497 EYA1Q99502 592 aa11.13□□□□□ -0.63
PMP22-207ENST00000580497 VIRMAQ69YN4 1812 aaKnown RBP11.13□□□□□ -0.63
PMP22-207ENST00000580497 ERBB3P21860 1342 aa11.12□□□□□ -0.63
PMP22-207ENST00000580497 IGSF1Q8N6C5 1336 aa11.12□□□□□ -0.63
PMP22-207ENST00000580497 NCAPD2Q15021 1401 aa11.12□□□□□ -0.63
PMP22-207ENST00000580497 HMOX1P09601 288 aa11.12□□□□□ -0.63
PMP22-207ENST00000580497 U2AF1L5P0DN76 240 aaPredicted RBP11.12□□□□□ -0.63
PMP22-207ENST00000580497 U2AF1Q01081 240 aaKnown RBP eCLIP11.12□□□□□ -0.63
PMP22-207ENST00000580497 NBPF6Q5VWK0 638 aa11.12□□□□□ -0.63
PMP22-207ENST00000580497 CCDC146Q8IYE0 955 aa11.12□□□□□ -0.63
PMP22-207ENST00000580497 NBPF4Q96M43 638 aa11.12□□□□□ -0.63
PMP22-207ENST00000580497 NUDCQ9Y266 331 aa11.12□□□□□ -0.63
PMP22-207ENST00000580497 SLIT2O94813 1529 aa11.12□□□□□ -0.63
PMP22-207ENST00000580497 USHBP1Q8N6Y0 703 aa11.11□□□□□ -0.63
PMP22-207ENST00000580497 RSPH6AQ9H0K4 717 aa11.11□□□□□ -0.63
PMP22-207ENST00000580497 BTG4Q9NY30 223 aa11.11□□□□□ -0.63
PMP22-207ENST00000580497 SHANK3Q9BYB0 1731 aa11.11□□□□□ -0.63
PMP22-207ENST00000580497 KDRP35968 1356 aa11.11□□□□□ -0.63
PMP22-207ENST00000580497 PARP4Q9UKK3 1724 aaKnown RBP11.1□□□□□ -0.63
PMP22-207ENST00000580497 SULT6B1Q6IMI4 303 aa11.1□□□□□ -0.63
PMP22-207ENST00000580497 YTHDC1Q96MU7 727 aaKnown RBP11.1□□□□□ -0.63
PMP22-207ENST00000580497 PLEKHF1Q96S99 279 aa11.1□□□□□ -0.63
PMP22-207ENST00000580497 WDR17Q8IZU2 1322 aa11.09□□□□□ -0.63
PMP22-207ENST00000580497 BCL9LQ86UU0 1499 aa11.09□□□□□ -0.63
PMP22-207ENST00000580497 LARP1Q6PKG0 1096 aaKnown RBP11.09□□□□□ -0.63
PMP22-207ENST00000580497 C8orf37Q96NL8 207 aa11.09□□□□□ -0.63
PMP22-207ENST00000580497 STRN4Q9NRL3 753 aa11.09□□□□□ -0.63
PMP22-207ENST00000580497 PKD1L3Q7Z443 1732 aa11.09□□□□□ -0.63
PMP22-207ENST00000580497 FCHSD2O94868 740 aa11.08□□□□□ -0.64
PMP22-207ENST00000580497 CSB-PGBD3P0DP91 1061 aa11.08□□□□□ -0.64
PMP22-207ENST00000580497 PRKAR2BP31323 418 aa11.08□□□□□ -0.64
PMP22-207ENST00000580497 RUNDC1Q96C34 613 aa11.08□□□□□ -0.64
PMP22-207ENST00000580497 PHACTR3Q96KR7 559 aa11.08□□□□□ -0.64
PMP22-207ENST00000580497 EVA1CP58658 441 aa11.07□□□□□ -0.64
PMP22-207ENST00000580497 NLRP2Q9NX02 1062 aa11.07□□□□□ -0.64
PMP22-207ENST00000580497 MEGF6O75095 1541 aa11.07□□□□□ -0.64
PMP22-207ENST00000580497 CRB1P82279 1406 aa11.07□□□□□ -0.64
PMP22-207ENST00000580497 TOM1L2Q6ZVM7 507 aa11.06□□□□□ -0.64
PMP22-207ENST00000580497 FNBP4Q8N3X1 1017 aaPredicted RBP11.06□□□□□ -0.64
PMP22-207ENST00000580497 NGLY1Q96IV0 654 aa11.06□□□□□ -0.64
PMP22-207ENST00000580497 PHF23Q9BUL5 403 aaPredicted RBP11.06□□□□□ -0.64
PMP22-207ENST00000580497 APAF1O14727 1248 aa11.05□□□□□ -0.64
PMP22-207ENST00000580497 HNRNPUQ00839 825 aaKnown RBP eCLIP11.05□□□□□ -0.64
PMP22-207ENST00000580497 MEX3CQ5U5Q3 659 aaKnown RBP11.05□□□□□ -0.64
PMP22-207ENST00000580497 TCP11L2Q8N4U5 519 aa11.05□□□□□ -0.64
PMP22-207ENST00000580497 GLI3P10071 1580 aa11.04□□□□□ -0.64
PMP22-207ENST00000580497 CARD10Q9BWT7 1032 aa11.04□□□□□ -0.64
PMP22-207ENST00000580497 RRP7AQ9Y3A4 280 aaKnown RBP11.04□□□□□ -0.64
PMP22-207ENST00000580497 AFF2P51816 1311 aa11.04□□□□□ -0.64
PMP22-207ENST00000580497 LRRC37A3O60309 1634 aa11.03□□□□□ -0.64
PMP22-207ENST00000580497 UNC5CLQ8IV45 518 aa11.03□□□□□ -0.64
PMP22-207ENST00000580497 PNNQ9H307 717 aaKnown RBP11.03□□□□□ -0.64
PMP22-207ENST00000580497 USP35Q9P2H5 1018 aa11.03□□□□□ -0.64
PMP22-207ENST00000580497 USP21Q9UK80 565 aa11.03□□□□□ -0.64
PMP22-207ENST00000580497 SALL2Q9Y467 1007 aaPredicted RBP11.03□□□□□ -0.64
PMP22-207ENST00000580497 MAPK8IP3Q9UPT6 1336 aa11.03□□□□□ -0.64
PMP22-207ENST00000580497 SCN11AQ9UI33 1791 aa11.03□□□□□ -0.64
PMP22-207ENST00000580497 OVOS2A0A0G2JMS6 1433 aa11.02□□□□□ -0.64
PMP22-207ENST00000580497 DISP2A7MBM2 1401 aa11.02□□□□□ -0.64
PMP22-207ENST00000580497 ADAMTS7Q9UKP4 1686 aa11.02□□□□□ -0.64
PMP22-207ENST00000580497 TMPOP42166 694 aaKnown RBP11.02□□□□□ -0.65
PMP22-207ENST00000580497 MTHFSDQ2M296 383 aaKnown RBP11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms