RNA–Protein interactions for RNA: ENST00000580315.1

CDC42EP4-205, Transcript of CDC42 effector protein 4, humanhuman

TSL 2

Gene CDC42EP4, Length 1,022 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-205ENST00000580315 CPSF1Q10570 1443 aaKnown RBP34.84■■■■□ 3.17
CDC42EP4-205ENST00000580315 NBPF14Q5TI25 921 aa34.84■■■■□ 3.17
CDC42EP4-205ENST00000580315 KTN1Q86UP2 1357 aaKnown RBP34.84■■■■□ 3.17
CDC42EP4-205ENST00000580315 TTC21BQ7Z4L5 1316 aa34.81■■■■□ 3.16
CDC42EP4-205ENST00000580315 TMF1P82094 1093 aa34.81■■■■□ 3.16
CDC42EP4-205ENST00000580315 TOM1L2Q6ZVM7 507 aa34.81■■■■□ 3.16
CDC42EP4-205ENST00000580315 HDGFL2Q7Z4V5 671 aaPredicted RBP34.81■■■■□ 3.16
CDC42EP4-205ENST00000580315 AXIN2Q9Y2T1 843 aa34.81■■■■□ 3.16
CDC42EP4-205ENST00000580315 PIK3C2AO00443 1686 aa34.81■■■■□ 3.16
CDC42EP4-205ENST00000580315 TTC21AQ8NDW8 1320 aa34.81■■■■□ 3.16
CDC42EP4-205ENST00000580315 NUP188Q5SRE5 1749 aa34.8■■■■□ 3.16
CDC42EP4-205ENST00000580315 OVOS2A0A0G2JMS6 1433 aa34.8■■■■□ 3.16
CDC42EP4-205ENST00000580315 OVOS2A0A0J9YW53 1432 aa34.8■■■■□ 3.16
CDC42EP4-205ENST00000580315 OVOS2Q6IE36 1432 aa34.8■■■■□ 3.16
CDC42EP4-205ENST00000580315 TERF2IPQ9NYB0 399 aa34.79■■■■□ 3.16
CDC42EP4-205ENST00000580315 DDB1Q16531 1140 aa34.78■■■■□ 3.16
CDC42EP4-205ENST00000580315 SLC12A5Q9H2X9 1139 aa34.78■■■■□ 3.16
CDC42EP4-205ENST00000580315 NINLQ9Y2I6 1382 aa34.77■■■■□ 3.16
CDC42EP4-205ENST00000580315 WDR17Q8IZU2 1322 aa34.77■■■■□ 3.16
CDC42EP4-205ENST00000580315 COL18A1P39060 1754 aa34.77■■■■□ 3.16
CDC42EP4-205ENST00000580315 ARHGEF25Q86VW2 580 aa34.76■■■■□ 3.16
CDC42EP4-205ENST00000580315 AKAP12Q02952 1782 aa34.76■■■■□ 3.15
CDC42EP4-205ENST00000580315 PEAK1Q9H792 1746 aa34.75■■■■□ 3.15
CDC42EP4-205ENST00000580315 CDCA8Q53HL2 280 aa34.74■■■■□ 3.15
CDC42EP4-205ENST00000580315 KCNH5Q8NCM2 988 aa34.74■■■■□ 3.15
CDC42EP4-205ENST00000580315 LRRC37A3O60309 1634 aa34.73■■■■□ 3.15
CDC42EP4-205ENST00000580315 CD163L1Q9NR16 1453 aa34.72■■■■□ 3.15
CDC42EP4-205ENST00000580315 PLSCR1O15162 318 aa34.71■■■■□ 3.15
CDC42EP4-205ENST00000580315 SOX12O15370 315 aa34.7■■■■□ 3.15
CDC42EP4-205ENST00000580315 CDCA7Q9BWT1 371 aaPredicted RBP34.7■■■■□ 3.15
CDC42EP4-205ENST00000580315 SUGP2Q8IX01 1082 aaKnown RBP eCLIP34.69■■■■□ 3.14
CDC42EP4-205ENST00000580315 A0A1W2PP64 1363 aa34.68■■■■□ 3.14
CDC42EP4-205ENST00000580315 PTF1AQ7RTS3 328 aa34.68■■■■□ 3.14
CDC42EP4-205ENST00000580315 MARCH10Q8NA82 808 aaPredicted RBP34.68■■■■□ 3.14
CDC42EP4-205ENST00000580315 BCL11BQ9C0K0 894 aaPredicted RBP34.68■■■■□ 3.14
CDC42EP4-205ENST00000580315 MON2Q7Z3U7 1717 aa34.67■■■■□ 3.14
CDC42EP4-205ENST00000580315 EDC4Q6P2E9 1401 aaKnown RBP34.67■■■■□ 3.14
CDC42EP4-205ENST00000580315 CARD10Q9BWT7 1032 aa34.67■■■■□ 3.14
CDC42EP4-205ENST00000580315 CSB-PGBD3P0DP91 1061 aa34.66■■■■□ 3.14
CDC42EP4-205ENST00000580315 SPON1Q9HCB6 807 aa34.65■■■■□ 3.14
CDC42EP4-205ENST00000580315 SBF2Q86WG5 1849 aa34.64■■■■□ 3.14
CDC42EP4-205ENST00000580315 KCNQ2O43526 872 aa34.63■■■■□ 3.13
CDC42EP4-205ENST00000580315 EIF4G2P78344 907 aaKnown RBP eCLIP34.63■■■■□ 3.131e-15■■■■■ 43.4
CDC42EP4-205ENST00000580315 BCL9O00512 1426 aa34.63■■■■□ 3.13
CDC42EP4-205ENST00000580315 NFAT5O94916 1531 aa34.62■■■■□ 3.13
CDC42EP4-205ENST00000580315 RGPD3A6NKT7 1758 aaPredicted RBP34.62■■■■□ 3.13
CDC42EP4-205ENST00000580315 RGPD4Q7Z3J3 1758 aa34.62■■■■□ 3.13
CDC42EP4-205ENST00000580315 USP31Q70CQ4 1352 aa34.61■■■■□ 3.13
CDC42EP4-205ENST00000580315 WNK3Q9BYP7 1800 aa34.6■■■■□ 3.13
CDC42EP4-205ENST00000580315 NME9Q86XW9 330 aa34.6■■■■□ 3.13
CDC42EP4-205ENST00000580315 RGPD5Q99666 1765 aa34.59■■■■□ 3.13
CDC42EP4-205ENST00000580315 ANO8Q9HCE9 1232 aaPredicted RBP34.59■■■■□ 3.13
CDC42EP4-205ENST00000580315 ANKRD36BQ8N2N9 1353 aa34.59■■■■□ 3.13
CDC42EP4-205ENST00000580315 PROM2Q8N271 834 aa34.58■■■■□ 3.13
CDC42EP4-205ENST00000580315 PPP1R1BQ9UD71 204 aaPredicted RBP34.58■■■■□ 3.13
CDC42EP4-205ENST00000580315 EXOC5O00471 708 aa34.57■■■■□ 3.12
CDC42EP4-205ENST00000580315 CCDC7Q96M83 1385 aa34.55■■■■□ 3.12
CDC42EP4-205ENST00000580315 HSPA5P11021 654 aaKnown RBP34.54■■■■□ 3.12
CDC42EP4-205ENST00000580315 ABCC6O95255 1503 aa34.53■■■■□ 3.12
CDC42EP4-205ENST00000580315 PDGFDQ9GZP0 370 aaPredicted RBP34.49■■■■□ 3.11
CDC42EP4-205ENST00000580315 TXNRD1Q16881 649 aa34.48■■■■□ 3.11
CDC42EP4-205ENST00000580315 USP54Q70EL1 1684 aa34.47■■■■□ 3.11
CDC42EP4-205ENST00000580315 TNS2Q63HR2 1409 aa34.47■■■■□ 3.11
CDC42EP4-205ENST00000580315 ERBB3P21860 1342 aa34.47■■■■□ 3.11
CDC42EP4-205ENST00000580315 COG3Q96JB2 828 aa34.46■■■■□ 3.11
CDC42EP4-205ENST00000580315 NLRP2Q9NX02 1062 aa34.45■■■■□ 3.11
CDC42EP4-205ENST00000580315 CASZ1Q86V15 1759 aa34.44■■■■□ 3.1
CDC42EP4-205ENST00000580315 POLR3GLQ9BT43 218 aa34.44■■■■□ 3.1
CDC42EP4-205ENST00000580315 YY1P25490 414 aa34.43■■■■□ 3.1
CDC42EP4-205ENST00000580315 ZBTB7AO95365 584 aa34.41■■■■□ 3.1
CDC42EP4-205ENST00000580315 STK32BQ9NY57 414 aa34.41■■■■□ 3.1
CDC42EP4-205ENST00000580315 DCAF8L1A6NGE4 600 aa34.39■■■■□ 3.1
CDC42EP4-205ENST00000580315 IL2RBP14784 551 aa34.39■■■■□ 3.1
CDC42EP4-205ENST00000580315 SLC15A2Q16348 729 aa34.39■■■■□ 3.1
CDC42EP4-205ENST00000580315 ANKRD24Q8TF21 1146 aa34.38■■■■□ 3.09
CDC42EP4-205ENST00000580315 ACSBG1Q96GR2 724 aa34.38■■■■□ 3.09
CDC42EP4-205ENST00000580315 MYOM1P52179 1685 aa34.36■■■■□ 3.09
CDC42EP4-205ENST00000580315 FYB1O15117 783 aa34.36■■■■□ 3.09
CDC42EP4-205ENST00000580315 PTGER2P43116 358 aa34.36■■■■□ 3.09
CDC42EP4-205ENST00000580315 ATF5Q9Y2D1 282 aaPredicted RBP34.35■■■■□ 3.09
CDC42EP4-205ENST00000580315 LTN1O94822 1766 aa34.34■■■■□ 3.09
CDC42EP4-205ENST00000580315 NHSQ6T4R5 1651 aa34.34■■■■□ 3.09
CDC42EP4-205ENST00000580315 GGNBP2Q9H3C7 697 aa34.33■■■■□ 3.09
CDC42EP4-205ENST00000580315 NSD3Q9BZ95 1437 aa34.32■■■■□ 3.08
CDC42EP4-205ENST00000580315 CARD14Q9BXL6 1004 aa34.32■■■■□ 3.08
CDC42EP4-205ENST00000580315 IP6K1Q92551 441 aa34.28■■■■□ 3.08
CDC42EP4-205ENST00000580315 MTFR1LQ9H019 292 aa34.27■■■■□ 3.08
CDC42EP4-205ENST00000580315 CGNL1Q0VF96 1302 aa34.26■■■■□ 3.07
CDC42EP4-205ENST00000580315 AMPHP49418 695 aa34.24■■■■□ 3.07
CDC42EP4-205ENST00000580315 MAP3K19Q56UN5 1328 aa34.24■■■■□ 3.07
CDC42EP4-205ENST00000580315 SGIP1Q9BQI5 828 aa34.23■■■■□ 3.07
CDC42EP4-205ENST00000580315 LTV1Q96GA3 475 aaPredicted RBP34.22■■■■□ 3.07
CDC42EP4-205ENST00000580315 FHDC1Q9C0D6 1143 aaPredicted RBP34.21■■■■□ 3.07
CDC42EP4-205ENST00000580315 FBLN1P23142 703 aa34.2■■■■□ 3.07
CDC42EP4-205ENST00000580315 DDX54Q8TDD1 881 aaKnown RBP34.2■■■■□ 3.07
CDC42EP4-205ENST00000580315 SYT17Q9BSW7 474 aa34.2■■■■□ 3.07
CDC42EP4-205ENST00000580315 LRRC4BQ9NT99 713 aa34.2■■■■□ 3.07
CDC42EP4-205ENST00000580315 BTAF1O14981 1849 aa34.2■■■■□ 3.07
CDC42EP4-205ENST00000580315 KIF20BQ96Q89 1820 aa34.2■■■■□ 3.07
CDC42EP4-205ENST00000580315 PAPPAQ13219 1627 aa34.19■■■■□ 3.06
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms