RNA–Protein interactions for RNA: ENST00000579632.5

CDK5RAP3-214, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 738 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-214ENST00000579632 FAM83GA6ND36 823 aa14.03□□□□□ -0.16
CDK5RAP3-214ENST00000579632 U2SURPO15042 1029 aaKnown RBP14.03□□□□□ -0.16
CDK5RAP3-214ENST00000579632 U2AF1L5P0DN76 240 aaPredicted RBP14.03□□□□□ -0.16
CDK5RAP3-214ENST00000579632 U2AF1Q01081 240 aaKnown RBP eCLIP14.03□□□□□ -0.161e-8■□□□□ 9.6
CDK5RAP3-214ENST00000579632 CHRNA2Q15822 529 aa14.03□□□□□ -0.16
CDK5RAP3-214ENST00000579632 ADAMTS8Q9UP79 889 aa14.03□□□□□ -0.16
CDK5RAP3-214ENST00000579632 AXIN2Q9Y2T1 843 aa14.03□□□□□ -0.16
CDK5RAP3-214ENST00000579632 COL3A1P02461 1466 aaPredicted RBP14.03□□□□□ -0.16
CDK5RAP3-214ENST00000579632 COL22A1Q8NFW1 1626 aaPredicted RBP14.02□□□□□ -0.16
CDK5RAP3-214ENST00000579632 ABCC6O95255 1503 aa14.02□□□□□ -0.16
CDK5RAP3-214ENST00000579632 NUTM2BA6NNL0 878 aaPredicted RBP14.02□□□□□ -0.17
CDK5RAP3-214ENST00000579632 NUTM2EB1AL46 878 aaPredicted RBP14.02□□□□□ -0.17
CDK5RAP3-214ENST00000579632 NUTM2AQ8IVF1 878 aaPredicted RBP14.02□□□□□ -0.17
CDK5RAP3-214ENST00000579632 MARF1Q9Y4F3 1742 aaKnown RBP14.01□□□□□ -0.17
CDK5RAP3-214ENST00000579632 FCHSD2O94868 740 aa14.01□□□□□ -0.17
CDK5RAP3-214ENST00000579632 ANKRD24Q8TF21 1146 aa14.01□□□□□ -0.17
CDK5RAP3-214ENST00000579632 ERBB3P21860 1342 aa14□□□□□ -0.17
CDK5RAP3-214ENST00000579632 ADAMTS2O95450 1211 aa14□□□□□ -0.17
CDK5RAP3-214ENST00000579632 LTV1Q96GA3 475 aaPredicted RBP14□□□□□ -0.17
CDK5RAP3-214ENST00000579632 IGSF1Q8N6C5 1336 aa13.99□□□□□ -0.17
CDK5RAP3-214ENST00000579632 EYA1Q99502 592 aa13.99□□□□□ -0.17
CDK5RAP3-214ENST00000579632 PHRF1Q9P1Y6 1649 aaKnown RBP13.99□□□□□ -0.17
CDK5RAP3-214ENST00000579632 CSB-PGBD3P0DP91 1061 aa13.98□□□□□ -0.17
CDK5RAP3-214ENST00000579632 EVA1CP58658 441 aa13.98□□□□□ -0.17
CDK5RAP3-214ENST00000579632 NEFMP07197 916 aa13.97□□□□□ -0.17
CDK5RAP3-214ENST00000579632 SULT6B1Q6IMI4 303 aa13.97□□□□□ -0.17
CDK5RAP3-214ENST00000579632 BTG4Q9NY30 223 aa13.97□□□□□ -0.17
CDK5RAP3-214ENST00000579632 PEAK1Q9H792 1746 aa13.97□□□□□ -0.17
CDK5RAP3-214ENST00000579632 WDR17Q8IZU2 1322 aa13.96□□□□□ -0.17
CDK5RAP3-214ENST00000579632 CRYBG1Q9Y4K1 1723 aa13.96□□□□□ -0.17
CDK5RAP3-214ENST00000579632 SHPRHQ149N8 1683 aa13.96□□□□□ -0.17
CDK5RAP3-214ENST00000579632 NBPF6Q5VWK0 638 aa13.96□□□□□ -0.17
CDK5RAP3-214ENST00000579632 RUNDC1Q96C34 613 aa13.96□□□□□ -0.17
CDK5RAP3-214ENST00000579632 NBPF4Q96M43 638 aa13.96□□□□□ -0.17
CDK5RAP3-214ENST00000579632 RSPH6AQ9H0K4 717 aa13.96□□□□□ -0.17
CDK5RAP3-214ENST00000579632 KDRP35968 1356 aa13.96□□□□□ -0.18
CDK5RAP3-214ENST00000579632 HMOX1P09601 288 aa13.95□□□□□ -0.18
CDK5RAP3-214ENST00000579632 MEX3CQ5U5Q3 659 aaKnown RBP13.95□□□□□ -0.18
CDK5RAP3-214ENST00000579632 FNBP4Q8N3X1 1017 aaPredicted RBP13.95□□□□□ -0.18
CDK5RAP3-214ENST00000579632 NGEFQ8N5V2 710 aa13.95□□□□□ -0.18
CDK5RAP3-214ENST00000579632 NGLY1Q96IV0 654 aa13.95□□□□□ -0.18
CDK5RAP3-214ENST00000579632 PLEKHF1Q96S99 279 aa13.95□□□□□ -0.18
CDK5RAP3-214ENST00000579632 NLRP2Q9NX02 1062 aa13.95□□□□□ -0.18
CDK5RAP3-214ENST00000579632 COL5A2P05997 1499 aaPredicted RBP13.94□□□□□ -0.18
CDK5RAP3-214ENST00000579632 PRKAR2BP31323 418 aa13.94□□□□□ -0.18
CDK5RAP3-214ENST00000579632 TOM1L2Q6ZVM7 507 aa13.94□□□□□ -0.18
CDK5RAP3-214ENST00000579632 C8orf37Q96NL8 207 aa13.94□□□□□ -0.18
CDK5RAP3-214ENST00000579632 CARD10Q9BWT7 1032 aa13.94□□□□□ -0.18
CDK5RAP3-214ENST00000579632 STRN4Q9NRL3 753 aa13.94□□□□□ -0.18
CDK5RAP3-214ENST00000579632 CAMTA1Q9Y6Y1 1673 aa13.94□□□□□ -0.18
CDK5RAP3-214ENST00000579632 MAPK8IP3Q9UPT6 1336 aa13.93□□□□□ -0.18
CDK5RAP3-214ENST00000579632 MAP2P11137 1827 aaKnown RBP13.93□□□□□ -0.18
CDK5RAP3-214ENST00000579632 NCBP3Q53F19 620 aaKnown RBP13.93□□□□□ -0.18
CDK5RAP3-214ENST00000579632 AEBP1Q8IUX7 1158 aa13.93□□□□□ -0.18
CDK5RAP3-214ENST00000579632 CCDC146Q8IYE0 955 aa13.93□□□□□ -0.18
CDK5RAP3-214ENST00000579632 NCAPD2Q15021 1401 aa13.92□□□□□ -0.18
CDK5RAP3-214ENST00000579632 HNRNPUQ00839 825 aaKnown RBP eCLIP13.92□□□□□ -0.18
CDK5RAP3-214ENST00000579632 LARP1Q6PKG0 1096 aaKnown RBP13.92□□□□□ -0.18
CDK5RAP3-214ENST00000579632 UNC5CLQ8IV45 518 aa13.92□□□□□ -0.18
CDK5RAP3-214ENST00000579632 SLIT2O94813 1529 aa13.91□□□□□ -0.18
CDK5RAP3-214ENST00000579632 ABCA3Q99758 1704 aa13.91□□□□□ -0.18
CDK5RAP3-214ENST00000579632 APAF1O14727 1248 aa13.91□□□□□ -0.18
CDK5RAP3-214ENST00000579632 TCP11L2Q8N4U5 519 aa13.91□□□□□ -0.18
CDK5RAP3-214ENST00000579632 USHBP1Q8N6Y0 703 aa13.91□□□□□ -0.18
CDK5RAP3-214ENST00000579632 RAPGEF4Q8WZA2 1011 aa13.91□□□□□ -0.18
CDK5RAP3-214ENST00000579632 PLEKHG2Q9H7P9 1386 aa13.91□□□□□ -0.18
CDK5RAP3-214ENST00000579632 LMO7Q8WWI1 1683 aa13.91□□□□□ -0.18
CDK5RAP3-214ENST00000579632 CRB1P82279 1406 aa13.9□□□□□ -0.18
CDK5RAP3-214ENST00000579632 LRP6O75581 1613 aa13.9□□□□□ -0.18
CDK5RAP3-214ENST00000579632 YTHDC1Q96MU7 727 aaKnown RBP13.9□□□□□ -0.18
CDK5RAP3-214ENST00000579632 COL14A1Q05707 1796 aaKnown RBP13.9□□□□□ -0.18
CDK5RAP3-214ENST00000579632 LTN1O94822 1766 aa13.89□□□□□ -0.19
CDK5RAP3-214ENST00000579632 COL18A1P39060 1754 aa13.89□□□□□ -0.19
CDK5RAP3-214ENST00000579632 AMOTQ4VCS5 1084 aa13.89□□□□□ -0.19
CDK5RAP3-214ENST00000579632 USP21Q9UK80 565 aa13.89□□□□□ -0.19
CDK5RAP3-214ENST00000579632 THRAP3Q9Y2W1 955 aaKnown RBP13.89□□□□□ -0.19
CDK5RAP3-214ENST00000579632 TMPOP42166 694 aaKnown RBP13.88□□□□□ -0.19
CDK5RAP3-214ENST00000579632 VPS72Q15906 364 aa13.88□□□□□ -0.19
CDK5RAP3-214ENST00000579632 GAS2L2Q8NHY3 880 aa13.88□□□□□ -0.19
CDK5RAP3-214ENST00000579632 PHACTR3Q96KR7 559 aa13.88□□□□□ -0.19
CDK5RAP3-214ENST00000579632 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.88□□□□□ -0.191e-11■□□□□ 11
CDK5RAP3-214ENST00000579632 IL2RBP14784 551 aa13.87□□□□□ -0.19
CDK5RAP3-214ENST00000579632 TATP17735 454 aaPredicted RBP13.87□□□□□ -0.19
CDK5RAP3-214ENST00000579632 NFE2L2Q16236 605 aa13.87□□□□□ -0.19
CDK5RAP3-214ENST00000579632 CCDC27Q2M243 656 aa13.87□□□□□ -0.19
CDK5RAP3-214ENST00000579632 PLEKHO1Q53GL0 409 aaPredicted RBP13.87□□□□□ -0.19
CDK5RAP3-214ENST00000579632 CDCA7Q9BWT1 371 aaPredicted RBP13.87□□□□□ -0.19
CDK5RAP3-214ENST00000579632 SPATA31A1Q5TZJ5 1347 aa13.87□□□□□ -0.19
CDK5RAP3-214ENST00000579632 SPATA31A5Q5VU36 1347 aa13.87□□□□□ -0.19
CDK5RAP3-214ENST00000579632 SPATA31A7Q8IWB4 1347 aa13.87□□□□□ -0.19
CDK5RAP3-214ENST00000579632 BCL9LQ86UU0 1499 aa13.87□□□□□ -0.19
CDK5RAP3-214ENST00000579632 LMOD3Q0VAK6 560 aa13.86□□□□□ -0.19
CDK5RAP3-214ENST00000579632 SPG7Q9UQ90 795 aa13.86□□□□□ -0.19
CDK5RAP3-214ENST00000579632 RGPD1P0DJD0 1748 aa13.86□□□□□ -0.19
CDK5RAP3-214ENST00000579632 AFF2P51816 1311 aa13.86□□□□□ -0.19
CDK5RAP3-214ENST00000579632 ZBED9Q6R2W3 1325 aa13.86□□□□□ -0.19
CDK5RAP3-214ENST00000579632 RIPK4P57078 832 aa13.85□□□□□ -0.19
CDK5RAP3-214ENST00000579632 MTHFSDQ2M296 383 aaKnown RBP13.85□□□□□ -0.19
CDK5RAP3-214ENST00000579632 BARGINQ6ZT62 677 aa13.85□□□□□ -0.19
CDK5RAP3-214ENST00000579632 USP35Q9P2H5 1018 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 131 ms