RNA–Protein interactions for RNA: ENST00000579563.1

PHF12-208, Transcript of PHD finger protein 12, human

TSL 4

Gene PHF12, Length 557 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PHF12-208	ENST00000579563	SLIT3	O75094	1523 aa		13.59	□□□□□ -0.23
PHF12-208	ENST00000579563	EVA1C	P58658	441 aa		13.58	□□□□□ -0.24
PHF12-208	ENST00000579563	NHSL1	Q5SYE7	1610 aa		13.57	□□□□□ -0.24
PHF12-208	ENST00000579563	BLM	P54132	1417 aa	Predicted RBP	13.57	□□□□□ -0.24
PHF12-208	ENST00000579563	USP54	Q70EL1	1684 aa		13.57	□□□□□ -0.24
PHF12-208	ENST00000579563	SULT6B1	Q6IMI4	303 aa		13.57	□□□□□ -0.24
PHF12-208	ENST00000579563	ANKRD24	Q8TF21	1146 aa		13.57	□□□□□ -0.24
PHF12-208	ENST00000579563	ZBED9	Q6R2W3	1325 aa		13.57	□□□□□ -0.24
PHF12-208	ENST00000579563	CPD	O75976	1380 aa		13.57	□□□□□ -0.24
PHF12-208	ENST00000579563	ALS2	Q96Q42	1657 aa		13.56	□□□□□ -0.24
PHF12-208	ENST00000579563	HMOX1	P09601	288 aa		13.56	□□□□□ -0.24
PHF12-208	ENST00000579563	PRKAR2B	P31323	418 aa		13.56	□□□□□ -0.24
PHF12-208	ENST00000579563	SALL2	Q9Y467	1007 aa	Predicted RBP	13.56	□□□□□ -0.24
PHF12-208	ENST00000579563	KIAA0232	Q92628	1395 aa		13.56	□□□□□ -0.24
PHF12-208	ENST00000579563	NFAT5	O94916	1531 aa		13.55	□□□□□ -0.24
PHF12-208	ENST00000579563	NUTM2B	A6NNL0	878 aa	Predicted RBP	13.55	□□□□□ -0.24
PHF12-208	ENST00000579563	NUTM2E	B1AL46	878 aa	Predicted RBP	13.55	□□□□□ -0.24
PHF12-208	ENST00000579563	APAF1	O14727	1248 aa		13.55	□□□□□ -0.24
PHF12-208	ENST00000579563	CHRNA2	Q15822	529 aa		13.55	□□□□□ -0.24
PHF12-208	ENST00000579563	NUTM2A	Q8IVF1	878 aa	Predicted RBP	13.55	□□□□□ -0.24
PHF12-208	ENST00000579563	NLRP2	Q9NX02	1062 aa		13.55	□□□□□ -0.24
PHF12-208	ENST00000579563	JCAD	Q9P266	1359 aa		13.55	□□□□□ -0.24
PHF12-208	ENST00000579563	MAP2	P11137	1827 aa	Known RBP	13.55	□□□□□ -0.24
PHF12-208	ENST00000579563	COL3A1	P02461	1466 aa	Predicted RBP	13.55	□□□□□ -0.24
PHF12-208	ENST00000579563	MED1	Q15648	1581 aa	Predicted RBP	13.54	□□□□□ -0.24
PHF12-208	ENST00000579563	LMOD3	Q0VAK6	560 aa		13.54	□□□□□ -0.24
PHF12-208	ENST00000579563	PDE3B	Q13370	1112 aa		13.54	□□□□□ -0.24
PHF12-208	ENST00000579563	TCP11L2	Q8N4U5	519 aa		13.54	□□□□□ -0.24
PHF12-208	ENST00000579563	PHLPP1	O60346	1717 aa		13.53	□□□□□ -0.24
PHF12-208	ENST00000579563	NEUROD2	Q15784	382 aa		13.53	□□□□□ -0.24
PHF12-208	ENST00000579563	EYA1	Q99502	592 aa		13.53	□□□□□ -0.24
PHF12-208	ENST00000579563	RSPH6A	Q9H0K4	717 aa		13.53	□□□□□ -0.24
PHF12-208	ENST00000579563	ADAMTS2	O95450	1211 aa		13.52	□□□□□ -0.25
PHF12-208	ENST00000579563	CALD1	Q05682	793 aa	Known RBP	13.52	□□□□□ -0.25
PHF12-208	ENST00000579563	NCBP3	Q53F19	620 aa	Known RBP	13.52	□□□□□ -0.25
PHF12-208	ENST00000579563	MEX3C	Q5U5Q3	659 aa	Known RBP	13.52	□□□□□ -0.25
PHF12-208	ENST00000579563	TOM1L2	Q6ZVM7	507 aa		13.52	□□□□□ -0.25
PHF12-208	ENST00000579563	SPATA31A6	Q5VVP1	1343 aa		13.51	□□□□□ -0.25
PHF12-208	ENST00000579563	IGSF1	Q8N6C5	1336 aa		13.51	□□□□□ -0.25
PHF12-208	ENST00000579563	GAS2L2	Q8NHY3	880 aa		13.51	□□□□□ -0.25
PHF12-208	ENST00000579563	RAPGEF4	Q8WZA2	1011 aa		13.51	□□□□□ -0.25
PHF12-208	ENST00000579563	STRN4	Q9NRL3	753 aa		13.51	□□□□□ -0.25
PHF12-208	ENST00000579563	ABCC6	O95255	1503 aa		13.5	□□□□□ -0.25
PHF12-208	ENST00000579563	ERBB3	P21860	1342 aa		13.5	□□□□□ -0.25
PHF12-208	ENST00000579563	RIPK4	P57078	832 aa		13.5	□□□□□ -0.25
PHF12-208	ENST00000579563	NFE2L2	Q16236	605 aa		13.5	□□□□□ -0.25
PHF12-208	ENST00000579563	PLEKHO1	Q53GL0	409 aa	Predicted RBP	13.5	□□□□□ -0.25
PHF12-208	ENST00000579563	RTF1	Q92541	710 aa	Known RBP	13.5	□□□□□ -0.25
PHF12-208	ENST00000579563	AXIN2	Q9Y2T1	843 aa		13.5	□□□□□ -0.25
PHF12-208	ENST00000579563	SENP3-EIF4A1	A0A087X0R7	540 aa		13.49	□□□□□ -0.25
PHF12-208	ENST00000579563	FAM83G	A6ND36	823 aa		13.49	□□□□□ -0.25
PHF12-208	ENST00000579563	TAT	P17735	454 aa	Predicted RBP	13.49	□□□□□ -0.25
PHF12-208	ENST00000579563	HSPA1L	P34931	641 aa		13.49	□□□□□ -0.25
PHF12-208	ENST00000579563	TMPO	P42166	694 aa	Known RBP	13.49	□□□□□ -0.25
PHF12-208	ENST00000579563	AMOT	Q4VCS5	1084 aa		13.49	□□□□□ -0.25
PHF12-208	ENST00000579563	NBPF6	Q5VWK0	638 aa		13.49	□□□□□ -0.25
PHF12-208	ENST00000579563	NBPF4	Q96M43	638 aa		13.49	□□□□□ -0.25
PHF12-208	ENST00000579563	PLEKHF1	Q96S99	279 aa		13.49	□□□□□ -0.25
PHF12-208	ENST00000579563	BTG4	Q9NY30	223 aa		13.49	□□□□□ -0.25
PHF12-208	ENST00000579563	RRP7A	Q9Y3A4	280 aa	Known RBP	13.49	□□□□□ -0.25
PHF12-208	ENST00000579563	GOLGA2	Q08379	1002 aa		13.48	□□□□□ -0.25
PHF12-208	ENST00000579563	CCDC27	Q2M243	656 aa		13.48	□□□□□ -0.25
PHF12-208	ENST00000579563	AEBP1	Q8IUX7	1158 aa		13.48	□□□□□ -0.25
PHF12-208	ENST00000579563	USHBP1	Q8N6Y0	703 aa		13.48	□□□□□ -0.25
PHF12-208	ENST00000579563	PHRF1	Q9P1Y6	1649 aa	Known RBP	13.48	□□□□□ -0.25
PHF12-208	ENST00000579563	PEAK1	Q9H792	1746 aa		13.47	□□□□□ -0.25
PHF12-208	ENST00000579563	COL16A1	Q07092	1604 aa	Predicted RBP	13.47	□□□□□ -0.25
PHF12-208	ENST00000579563	WDR17	Q8IZU2	1322 aa		13.47	□□□□□ -0.25
PHF12-208	ENST00000579563	WDR63	Q8IWG1	891 aa		13.47	□□□□□ -0.25
PHF12-208	ENST00000579563	NGLY1	Q96IV0	654 aa		13.47	□□□□□ -0.25
PHF12-208	ENST00000579563	MARF1	Q9Y4F3	1742 aa	Known RBP	13.47	□□□□□ -0.25
PHF12-208	ENST00000579563	SHPRH	Q149N8	1683 aa		13.47	□□□□□ -0.25
PHF12-208	ENST00000579563	LTN1	O94822	1766 aa		13.46	□□□□□ -0.25
PHF12-208	ENST00000579563	C1orf141	Q5JVX7	400 aa		13.46	□□□□□ -0.25
PHF12-208	ENST00000579563	MYH16	Q9H6N6	1097 aa		13.46	□□□□□ -0.25
PHF12-208	ENST00000579563	SPG7	Q9UQ90	795 aa		13.46	□□□□□ -0.25
PHF12-208	ENST00000579563	CCDC9	Q9Y3X0	531 aa	Known RBP	13.46	□□□□□ -0.25
PHF12-208	ENST00000579563	KDR	P35968	1356 aa		13.45	□□□□□ -0.26
PHF12-208	ENST00000579563		E9PSI1	815 aa		13.45	□□□□□ -0.26
PHF12-208	ENST00000579563	WWC1	Q8IX03	1113 aa		13.45	□□□□□ -0.26
PHF12-208	ENST00000579563	PHACTR3	Q96KR7	559 aa		13.45	□□□□□ -0.26
PHF12-208	ENST00000579563	CARD10	Q9BWT7	1032 aa		13.45	□□□□□ -0.26
PHF12-208	ENST00000579563	COL22A1	Q8NFW1	1626 aa	Predicted RBP	13.45	□□□□□ -0.26
PHF12-208	ENST00000579563	HTATSF1	O43719	755 aa	Known RBP	13.44	□□□□□ -0.26
PHF12-208	ENST00000579563	C8orf37	Q96NL8	207 aa		13.44	□□□□□ -0.26
PHF12-208	ENST00000579563	GNAT3	A8MTJ3	354 aa		13.42	□□□□□ -0.26
PHF12-208	ENST00000579563	MTHFSD	Q2M296	383 aa	Known RBP	13.42	□□□□□ -0.26
PHF12-208	ENST00000579563	ZNF530	Q6P9A1	599 aa	Predicted RBP	13.42	□□□□□ -0.26
PHF12-208	ENST00000579563	LARP1	Q6PKG0	1096 aa	Known RBP	13.42	□□□□□ -0.26
PHF12-208	ENST00000579563	CDCA7	Q9BWT1	371 aa	Predicted RBP	13.42	□□□□□ -0.26
PHF12-208	ENST00000579563	BCLAF1	Q9NYF8	920 aa	Known RBP eCLIP	13.42	□□□□□ -0.26
PHF12-208	ENST00000579563	IL16	Q14005	1332 aa		13.41	□□□□□ -0.26
PHF12-208	ENST00000579563	COL14A1	Q05707	1796 aa	Known RBP	13.41	□□□□□ -0.26
PHF12-208	ENST00000579563	HSP90AB1	P08238	724 aa	Known RBP	13.41	□□□□□ -0.26
PHF12-208	ENST00000579563	IL2RB	P14784	551 aa		13.41	□□□□□ -0.26
PHF12-208	ENST00000579563	USP35	Q9P2H5	1018 aa		13.41	□□□□□ -0.26
PHF12-208	ENST00000579563	LAS1L	Q9Y4W2	734 aa	Known RBP	13.41	□□□□□ -0.26
PHF12-208	ENST00000579563	PLEKHG2	Q9H7P9	1386 aa		13.41	□□□□□ -0.26
PHF12-208	ENST00000579563	COL5A2	P05997	1499 aa	Predicted RBP	13.41	□□□□□ -0.26
PHF12-208	ENST00000579563	CRB1	P82279	1406 aa		13.4	□□□□□ -0.26

Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms