RNA–Protein interactions for RNA: ENST00000579449.1

TSEN54-206, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

TSL 2

Gene TSEN54, Length 786 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-206ENST00000579449 NUDCQ9Y266 331 aa18.52■□□□□ 0.56
TSEN54-206ENST00000579449 IL13P35225 146 aa18.51■□□□□ 0.55
TSEN54-206ENST00000579449 IP6K1Q92551 441 aa18.51■□□□□ 0.55
TSEN54-206ENST00000579449 HAP1P54257 671 aaPredicted RBP18.5■□□□□ 0.55
TSEN54-206ENST00000579449 EIF4A2Q14240 407 aaKnown RBP18.5■□□□□ 0.55
TSEN54-206ENST00000579449 RGPD5Q99666 1765 aa18.5■□□□□ 0.55
TSEN54-206ENST00000579449 U2SURPO15042 1029 aaKnown RBP18.49■□□□□ 0.55
TSEN54-206ENST00000579449 CPDO75976 1380 aa18.49■□□□□ 0.55
TSEN54-206ENST00000579449 COL18A1P39060 1754 aa18.49■□□□□ 0.55
TSEN54-206ENST00000579449 KIAA0232Q92628 1395 aa18.48■□□□□ 0.55
TSEN54-206ENST00000579449 U2AF1L5P0DN76 240 aaPredicted RBP18.48■□□□□ 0.55
TSEN54-206ENST00000579449 U2AF1Q01081 240 aaKnown RBP eCLIP18.48■□□□□ 0.55
TSEN54-206ENST00000579449 BLMP54132 1417 aaPredicted RBP18.47■□□□□ 0.55
TSEN54-206ENST00000579449 CHRNA2Q15822 529 aa18.46■□□□□ 0.55
TSEN54-206ENST00000579449 ABCC6O95255 1503 aa18.45■□□□□ 0.54
TSEN54-206ENST00000579449 LTV1Q96GA3 475 aaPredicted RBP18.45■□□□□ 0.54
TSEN54-206ENST00000579449 AXIN2Q9Y2T1 843 aa18.45■□□□□ 0.54
TSEN54-206ENST00000579449 RGPD1P0DJD0 1748 aa18.45■□□□□ 0.54
TSEN54-206ENST00000579449 HNRNPUQ00839 825 aaKnown RBP eCLIP18.44■□□□□ 0.54
TSEN54-206ENST00000579449 CCDC146Q8IYE0 955 aa18.44■□□□□ 0.54
TSEN54-206ENST00000579449 PRDM11Q9NQV5 511 aa18.44■□□□□ 0.54
TSEN54-206ENST00000579449 JCADQ9P266 1359 aa18.43■□□□□ 0.54
TSEN54-206ENST00000579449 RGPD2P0DJD1 1756 aa18.43■□□□□ 0.54
TSEN54-206ENST00000579449 HSPA1LP34931 641 aa18.43■□□□□ 0.54
TSEN54-206ENST00000579449 LMO7Q8WWI1 1683 aa18.41■□□□□ 0.54
TSEN54-206ENST00000579449 HMOX1P09601 288 aa18.41■□□□□ 0.54
TSEN54-206ENST00000579449 ANKRD24Q8TF21 1146 aa18.41■□□□□ 0.54
TSEN54-206ENST00000579449 EYA1Q99502 592 aa18.41■□□□□ 0.54
TSEN54-206ENST00000579449 SENP3-EIF4A1A0A087X0R7 540 aa18.4■□□□□ 0.54
TSEN54-206ENST00000579449 FAM83GA6ND36 823 aa18.4■□□□□ 0.54
TSEN54-206ENST00000579449 FCHSD2O94868 740 aa18.4■□□□□ 0.54
TSEN54-206ENST00000579449 RUNDC1Q96C34 613 aa18.4■□□□□ 0.54
TSEN54-206ENST00000579449 RSPH6AQ9H0K4 717 aa18.4■□□□□ 0.54
TSEN54-206ENST00000579449 NUTM2BA6NNL0 878 aaPredicted RBP18.39■□□□□ 0.53
TSEN54-206ENST00000579449 NUTM2EB1AL46 878 aaPredicted RBP18.39■□□□□ 0.53
TSEN54-206ENST00000579449 NUTM2AQ8IVF1 878 aaPredicted RBP18.39■□□□□ 0.53
TSEN54-206ENST00000579449 PLEKHF1Q96S99 279 aa18.39■□□□□ 0.53
TSEN54-206ENST00000579449 PNNQ9H307 717 aaKnown RBP18.39■□□□□ 0.53
TSEN54-206ENST00000579449 IGSF1Q8N6C5 1336 aa18.39■□□□□ 0.53
TSEN54-206ENST00000579449 COL14A1Q05707 1796 aaKnown RBP18.39■□□□□ 0.53
TSEN54-206ENST00000579449 CAMTA1Q9Y6Y1 1673 aa18.38■□□□□ 0.53
TSEN54-206ENST00000579449 SULT6B1Q6IMI4 303 aa18.38■□□□□ 0.53
TSEN54-206ENST00000579449 AEBP1Q8IUX7 1158 aa18.38■□□□□ 0.53
TSEN54-206ENST00000579449 ERBB3P21860 1342 aa18.38■□□□□ 0.53
TSEN54-206ENST00000579449 PRKAR2BP31323 418 aa18.37■□□□□ 0.53
TSEN54-206ENST00000579449 NBPF6Q5VWK0 638 aa18.37■□□□□ 0.53
TSEN54-206ENST00000579449 NBPF4Q96M43 638 aa18.37■□□□□ 0.53
TSEN54-206ENST00000579449 FAM208AQ9UK61 1670 aaKnown RBP18.37■□□□□ 0.53
TSEN54-206ENST00000579449 APAF1O14727 1248 aa18.36■□□□□ 0.53
TSEN54-206ENST00000579449 ADAMTS2O95450 1211 aa18.36■□□□□ 0.53
TSEN54-206ENST00000579449 USHBP1Q8N6Y0 703 aa18.35■□□□□ 0.53
TSEN54-206ENST00000579449 COL5A2P05997 1499 aaPredicted RBP18.34■□□□□ 0.53
TSEN54-206ENST00000579449 KDRP35968 1356 aa18.34■□□□□ 0.53
TSEN54-206ENST00000579449 SPATA31A6Q5VVP1 1343 aa18.34■□□□□ 0.53
TSEN54-206ENST00000579449 MAPK8IP3Q9UPT6 1336 aa18.34■□□□□ 0.53
TSEN54-206ENST00000579449 CSB-PGBD3P0DP91 1061 aa18.34■□□□□ 0.53
TSEN54-206ENST00000579449 TCP11L2Q8N4U5 519 aa18.34■□□□□ 0.53
TSEN54-206ENST00000579449 SALL2Q9Y467 1007 aaPredicted RBP18.34■□□□□ 0.53
TSEN54-206ENST00000579449 ZBED9Q6R2W3 1325 aa18.33■□□□□ 0.53
TSEN54-206ENST00000579449 NEFMP07197 916 aa18.33■□□□□ 0.52
TSEN54-206ENST00000579449 PLCH1Q4KWH8 1693 aa18.33■□□□□ 0.52
TSEN54-206ENST00000579449 NCAPD2Q15021 1401 aa18.32■□□□□ 0.52
TSEN54-206ENST00000579449 PHACTR3Q96KR7 559 aa18.32■□□□□ 0.52
TSEN54-206ENST00000579449 NLRP2Q9NX02 1062 aa18.32■□□□□ 0.52
TSEN54-206ENST00000579449 BTG4Q9NY30 223 aa18.32■□□□□ 0.52
TSEN54-206ENST00000579449 WDR17Q8IZU2 1322 aa18.31■□□□□ 0.52
TSEN54-206ENST00000579449 EVA1CP58658 441 aa18.31■□□□□ 0.52
TSEN54-206ENST00000579449 STRN4Q9NRL3 753 aa18.31■□□□□ 0.52
TSEN54-206ENST00000579449 RRP7AQ9Y3A4 280 aaKnown RBP18.3■□□□□ 0.52
TSEN54-206ENST00000579449 LRP6O75581 1613 aa18.3■□□□□ 0.52
TSEN54-206ENST00000579449 DLG5Q8TDM6 1919 aa18.29■□□□□ 0.52
TSEN54-206ENST00000579449 TMPOP42166 694 aaKnown RBP18.29■□□□□ 0.52
TSEN54-206ENST00000579449 NEUROD2Q15784 382 aa18.29■□□□□ 0.52
TSEN54-206ENST00000579449 NRAPQ86VF7 1730 aa18.29■□□□□ 0.52
TSEN54-206ENST00000579449 NWD2Q9ULI1 1742 aa18.29■□□□□ 0.52
TSEN54-206ENST00000579449 KCNA4P22459 653 aa18.28■□□□□ 0.52
TSEN54-206ENST00000579449 LARP1Q6PKG0 1096 aaKnown RBP18.28■□□□□ 0.52
TSEN54-206ENST00000579449 TOM1L2Q6ZVM7 507 aa18.28■□□□□ 0.52
TSEN54-206ENST00000579449 NGEFQ8N5V2 710 aa18.28■□□□□ 0.52
TSEN54-206ENST00000579449 NFE2L2Q16236 605 aa18.27■□□□□ 0.52
TSEN54-206ENST00000579449 FBXO41Q8TF61 875 aa18.27■□□□□ 0.52
TSEN54-206ENST00000579449 CARD10Q9BWT7 1032 aa18.26■□□□□ 0.51
TSEN54-206ENST00000579449 SLIT2O94813 1529 aa18.26■□□□□ 0.51
TSEN54-206ENST00000579449 RIPK4P57078 832 aa18.25■□□□□ 0.51
TSEN54-206ENST00000579449 NCBP3Q53F19 620 aaKnown RBP18.25■□□□□ 0.51
TSEN54-206ENST00000579449 C8orf37Q96NL8 207 aa18.25■□□□□ 0.51
TSEN54-206ENST00000579449 CRB1P82279 1406 aa18.24■□□□□ 0.51
TSEN54-206ENST00000579449 NGLY1Q96IV0 654 aa18.24■□□□□ 0.51
TSEN54-206ENST00000579449 ZNF521Q96K83 1311 aa18.23■□□□□ 0.51
TSEN54-206ENST00000579449 CENPBP07199 599 aaPredicted RBP18.23■□□□□ 0.51
TSEN54-206ENST00000579449 CCDC27Q2M243 656 aa18.23■□□□□ 0.51
TSEN54-206ENST00000579449 MTHFSDQ2M296 383 aaKnown RBP18.23■□□□□ 0.51
TSEN54-206ENST00000579449 MEX3CQ5U5Q3 659 aaKnown RBP18.23■□□□□ 0.51
TSEN54-206ENST00000579449 WWC1Q8IX03 1113 aa18.23■□□□□ 0.51
TSEN54-206ENST00000579449 RAPGEF4Q8WZA2 1011 aa18.23■□□□□ 0.51
TSEN54-206ENST00000579449 TATP17735 454 aaPredicted RBP18.22■□□□□ 0.51
TSEN54-206ENST00000579449 GAS2L2Q8NHY3 880 aa18.22■□□□□ 0.51
TSEN54-206ENST00000579449 TRIM35Q9UPQ4 493 aa18.22■□□□□ 0.51
TSEN54-206ENST00000579449 MEGF6O75095 1541 aa18.22■□□□□ 0.51
TSEN54-206ENST00000579449 PLEKHO1Q53GL0 409 aaPredicted RBP18.21■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms